CK933949

Overview
NameCK933949
Unique NameCK933949
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length814
Libraries
Library NameType
Developing fruit peel at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
CK933949_ssr745 microsatellite CK933949_ssr745:745..756. BLAST: Citrus ESTs to Prunus persica proteins V1
Homology
BLAST of CK933949 vs. ExPASy Swiss-Prot
Match: DRL3_ARATH (Probable disease resistance protein At1g15890 OS=Arabidopsis thaliana GN=At1g15890 PE=2 SV=1)

HSP 1 Score: 112.464 bits (280), Expect = 2.951e-24
Identity = 73/200 (36.50%), Postives = 111/200 (55.50%), Query Frame = 1
Query:   67 SHIHRSIGGKKIFLVLDDVW-DGDSNKWDPFFFCLKNGLHGSKILVTTRNESIARMMGTTESDTISIEQLAEEECW-LFFKQLAFFGRCFEDCERLEPIGRKIARKCKGLPLAAKVIGNLLRSKITVKEWQRI---LDSEMWKLEEIGQGLLAPLLLSYNDLPSNSMVKRCFSYCAVFPKDYSMDKEELISLWMAQGYFN 651
            S+I   +  KK  L+LDD+W + D  K        +NG   SKI+ TTR++ + R M       + ++ L  +E W LF K++       +  E +  + RK+A KC GLPLA  VIG  + S+ TV+EWQ +   L+S   +   + + +L  L  SY+DL  +  VK CF YC++FP+DY + KEELI  WM +G+ +
Sbjct:  316 SYICNILNVKKFVLLLDDLWSEVDLEKIGVPPLTRENG---SKIVFTTRSKDVCRDMEV--DGEMKVDCLPPDEAWELFQKKVGPIP--LQSHEDIPTLARKVAEKCCGLPLALSVIGKAMASRETVQEWQHVIHVLNSSSHEFPSMEEKILPVLKFSYDDL-KDEKVKLCFLYCSLFPEDYEVRKEELIEYWMCEGFID 507          
BLAST of CK933949 vs. ExPASy Swiss-Prot
Match: R13L3_ARATH (Putative disease resistance RPP13-like protein 3 OS=Arabidopsis thaliana GN=RPP13L3 PE=2 SV=1)

HSP 1 Score: 110.538 bits (275), Expect = 1.122e-23
Identity = 84/273 (30.77%), Postives = 134/273 (49.08%), Query Frame = 1
Query:    4 IIEGLG-----ESKEASGLSEFQSLMSHIHRSIGGKKIFLVLDDVWDGDSNKWDPFFFCLKNGLHGSKILVTTRNESIAR-MMGTTESDTISIEQLAEEECWLFFKQLAFFGRCFEDCERLEPIGRKIARKCKGLPLAAKVIGNLLRSKITVKEWQRILDSEMWKLEEIGQGLLAPLLLSYNDLPSNSMVKRCFSYCAVFPKDYSMDKEELISLWMAQGYFNAXXXXXXXXXXXXYFNILATRSFF--QEIEKDEDDDDFMRCKMHDIVHDFA 798
            II  LG     E ++     E + L  +++  + GK   +V+DDVWD D+  W+     L     GSK+++TTR  +IA  + GT  +  +    L  EE W  F++ AF      D E L+  G+++ +KC GLPLA  V+  LL  K T  EW  +  S   +L++    +     LS+ ++     +K CF Y +VFP+DY +  E+LI L +A+G+               Y + L  RS    + IE+ +     M C++HD++ D A
Sbjct:  236 IIRSLGIVSAEEMEKIKMFEEDEELEVYLYGLLEGKNYMVVVDDVWDPDA--WESLKRALPCDHRGSKVIITTRIRAIAEGVEGTVYAHKLRF--LTFEESWTLFERKAFSNIEKVD-EDLQRTGKEMVKKCGGLPLAIVVLSGLLSRKRT-NEWHEVCASLWRRLKDNSIHISTVFDLSFKEMRHE--LKLCFLYFSVFPEDYEIKVEKLIHLLVAEGFIQEDEEMMMEDVARCYIDELVDRSLVKAERIERGK----VMSCRIHDLLRDLA 496          
BLAST of CK933949 vs. ExPASy Swiss-Prot
Match: DRL4_ARATH (Putative disease resistance protein At1g50180 OS=Arabidopsis thaliana GN=At1g50180 PE=2 SV=1)

HSP 1 Score: 109.383 bits (272), Expect = 2.499e-23
Identity = 83/265 (31.32%), Postives = 130/265 (49.06%), Query Frame = 1
Query:   55 QSLMSHIHRSIGGKKIFLVLDDVWDGDSNKWDPFFFCLKNGLH---GSKILVTTRNESIARMMGTTESDTISIEQLAEEECWLFFKQLAFFGRCFEDCE-----RLEPIGRKIARKCKGLPLAAKVIGNLLRSKITVKEWQRILDSEMWKLEEIGQG------LLAPLL-LSYNDLPSNSMVKRCFSYCAVFPKDYSMDKEELISLWMAQGYF----NAXXXXXXXXXXXXYFNILATRSFFQEIEKDEDDDDFMRCKMHDIVHD 792
            + L   +HR +   K  +VLDD+W  D+  WD    CLK+      GS+I++TTRN+ +A +           + L  EE W   ++++  GR  E+ E     ++E IG++I  +C GLPLA  V+G LL +K T  EWQR+ ++    +   G        L+A +L LSY  LP +  VK+CF Y A +P+DY +    L+S  +A+G      +             Y   L  RS      +D    + M C+MHD++ +
Sbjct:  255 EQLGEELHRFLKRNKCLIVLDDIWGKDA--WD----CLKHVFPHETGSEIILTTRNKEVA-LYADPRGVLHEPQLLTCEESWELLEKISLSGR--ENIEPMLVKKMEEIGKQIVVRCGGLPLAITVLGGLLATKSTWNEWQRVCENIKSYVSNGGSSNGSKNMLVADVLCLSYEYLPPH--VKQCFLYFAHYPEDYEVHVGTLVSYCIAEGMVMPVKHTEAGTTVEDVGQDYLEELVKRSMVMVGRRDIVTSEVMTCRMHDLMRE 508          
BLAST of CK933949 vs. ExPASy Swiss-Prot
Match: DRL32_ARATH (Probable disease resistance protein At5g43730 OS=Arabidopsis thaliana GN=At5g43730 PE=2 SV=1)

HSP 1 Score: 107.842 bits (268), Expect = 7.270e-23
Identity = 76/257 (29.57%), Postives = 128/257 (49.81%), Query Frame = 1
Query:   67 SHIHRSIGGKKIFLVLDDVWDGDSNKWDPFFFCLKNGL------HGSKILVTTRNESIARMMGTTESDTISIEQLAEEECWLFFKQLAFFGRCFEDCERLEPIGRKIARKCKGLPLAAKVIGNLLRSKITVKEWQR---ILDSEMWKLEEIGQGLLAPLLLSYNDLPSNSMVKRCFSYCAVFPKDYSMDKEELISLWMAQGYFNAXXXXXXXXXXXXYFNILATRSFFQEIEKDEDDDDFMRCKMHDIVHDFAQFVS 810
            S I+ ++  KK  L+LDD+W             +K G+      +GSKI+ TTR++ + + M   +   I ++ L+ +E W  F+ L          + +  + R +A KC GLPLA  VIG  +  K TV+EW+    +L+S   K   + + +L  L  SY+ L  N  +K CF YC++FP+D+ ++K++LI  W+ +GY N                 L  R+    IE +  D    + KMHD++ + A +++
Sbjct:  244 SLINNNLKRKKFVLLLDDLWSEVD--------LIKIGVPPPSRENGSKIVFTTRSKEVCKHMKADKQ--IKVDCLSPDEAWELFR-LTVGDIILRSHQDIPALARIVAAKCHGLPLALNVIGKAMVCKETVQEWRHAINVLNSPGHKFPGMEERILPILKFSYDSL-KNGEIKLCFLYCSLFPEDFEIEKDKLIEYWICEGYINPNRYEDGGTNQGYDIIGLLVRAHLL-IECELTD----KVKMHDVIREMALWIN 483          
BLAST of CK933949 vs. ExPASy Swiss-Prot
Match: DRL17_ARATH (Probable disease resistance protein At1g61300 OS=Arabidopsis thaliana GN=At1g61300 PE=2 SV=2)

HSP 1 Score: 103.605 bits (257), Expect = 1.371e-21
Identity = 69/249 (27.71%), Postives = 120/249 (48.19%), Query Frame = 1
Query:   73 IHRSIGGKKIFLVLDDVWDGDSNKWDPFFFCLKNGLHGSKILVTTRNESIARMMGTTESDTISIEQLAEEECWLFFKQLAFFGRCFEDCERLEPIGRKIARKCKGLPLAAKVIGNLLRSKITVKEWQRILD---SEMWKLEEIGQGLLAPLLLSYNDLPSNSMVKRCFSYCAVFPKDYSMDKEELISLWMAQGYFNAXXXXXXXXXXXXYFNILATRSFFQEIEKDEDDDDFMRCKMHDIVHDFAQFVS 810
            IHR + GK+  L+LDD+W+      +       + ++  K+  TTR++ +   MG  +   + ++ L  E+ W  FK          D   +E + R++A+KC+GLPLA  VIG  + SK  V+EW+  +D       +   +G  +L  L  SY+ L  +  +K CF YCA+FP+D  +  E+LI  W+ +G+                + +L T +    + K   +       MHD+V + A +++
Sbjct:  136 IHRVLKGKRFVLMLDDIWE--KVDLEAIGVPYPSEVNKCKVAFTTRDQKVCGEMG--DHKPMQVKCLEPEDAWELFKNKVGDNTLRSDPVIVE-LAREVAQKCRGLPLALSVIGETMASKTMVQEWEHAIDVLTRSAAEFSNMGNKILPILKYSYDSL-GDEHIKSCFLYCALFPEDDEIYNEKLIDYWICEGFIGEDQVIKRARNKG--YEMLGTLTLANLLTKVGTE----HVVMHDVVREMALWIA 372          
BLAST of CK933949 vs. ExPASy Swiss-Prot
Match: DRL40_ARATH (Probable disease resistance protein At5g63020 OS=Arabidopsis thaliana GN=At5g63020 PE=2 SV=2)

HSP 1 Score: 103.219 bits (256), Expect = 1.791e-21
Identity = 75/253 (29.64%), Postives = 126/253 (49.80%), Query Frame = 1
Query:   67 SHIHRSIGGKKIFLVLDDVWDG-DSNKWDPFFFCLKNGLHGSKILVTTRNESIARMMGTTESDTISIEQLAEEECW-LFFKQLAFFGRCFEDCERLEPIGRKIARKCKGLPLAAKVIGNLLRSKITVKEWQRILD---SEMWKLEEIGQGLLAPLLLSYNDLPSNSMVKRCFSYCAVFPKDYSMDKEELISLWMAQGYFNAXXXXXXXXXXXXYFNILATRSFFQEIEKDEDDDDFMRCKMHDIVHDFAQFVS 810
            S+I+  +  K+  L+LDD+W   D  +    F   +NG    KI+ TTR + I   MG  +SD + +  LA ++ W LF K++            +  + R +A+KC+GLPLA  VIG  +  K TV+EW+  +D   S   +   +   +L  L  SY++L S  + K CF YCA+FP+D++++K +L+  W+ +G+ +                IL       E  ++         KMHD+V + A +++
Sbjct:  247 SNIYNVLKHKRFVLLLDDIWSKVDLTEVGVPFPSRENGC---KIVFTTRLKEICGRMGV-DSD-MEVRCLAPDDAWDLFTKKVGEI--TLGSHPEIPTVARTVAKKCRGLPLALNVIGETMAYKRTVQEWRSAIDVLTSSAAEFSGMEDEILPILKYSYDNLKSEQL-KLCFQYCALFPEDHNIEKNDLVDYWIGEGFID-RNKGKAENQGYEIIGILVRSCLLMEENQE-------TVKMHDVVREMALWIA 483          
BLAST of CK933949 vs. ExPASy Swiss-Prot
Match: DRL7_ARATH (Probable disease resistance protein At1g58390 OS=Arabidopsis thaliana GN=At1g58390 PE=2 SV=3)

HSP 1 Score: 102.449 bits (254), Expect = 3.054e-21
Identity = 79/277 (28.52%), Postives = 134/277 (48.38%), Query Frame = 1
Query:   22 ESKEASGLSEFQSLMSHIHRSIGGKKIFLVLDDVWDGDSNKWD---PFFFCLKNGLHGSKILVTTRNESIARMMGTTESDTISIEQLAEEECWLFFKQLAFFGRCFEDC---ERLEPIGRKIARKCKGLPLAAKVIGNLLRSKITVKEWQRI---LDSE-MWKLEEIGQGLLAPLLLSYNDLPSNSMVKRCFSYCAVFPKDYSMDKEELISLWMAQGYFNA---XXXXXXXXXXXXYFNILATRSFFQEIEKDEDDDDFMRCKMHDIVHDFAQFVSR 813
            E K+     E   L   + + +   K  +V DD+W  +   WD   P F   K    G K+L+T++NES+A + G  +      E LA E+ W  F+++AF  +   +    E +E +G+++ + C GLPLA KV+G LL +K T+ +W+R+   + S+ + +       +   L +S+ +LP  S +K CF Y A FP+D+ ++ E+L   W A+G   A               Y   L  R+     E+D     F  C +HD++ +   F ++
Sbjct:  242 EKKDEILQMEEAELHDKLFQLLETSKSLIVFDDIWKDED--WDLIKPIFPPNK----GWKVLLTSQNESVA-VRGDIKYLNFKPECLAIEDSWTLFQRIAFPKKDASESKVDEEMEDMGKQMLKHCGGLPLAIKVLGGLLAAKYTMHDWERLSVNIGSDIVGRTSSNNSSIYHVLSMSFEELP--SYLKHCFLYLAHFPEDHKINVEKLSYCWAAEGISTAEDYHNGETIQDVGQSYLEELVRRNMI-IWERDATASRFGTCHLHDMMREVCLFKAK 508          
BLAST of CK933949 vs. ExPASy Swiss-Prot
Match: DRL1_ARATH (Probable disease resistance protein At1g12280 OS=Arabidopsis thaliana GN=At1g12280 PE=2 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 3.054e-21
Identity = 69/250 (27.60%), Postives = 115/250 (46.00%), Query Frame = 1
Query:   73 IHRSIGGKKIFLVLDDVWDGDSNKWDPFFFCLKNGLHGSKILVTTRNESIARMMGTTESDTISIEQLAEEECWLFFKQLAFFGRCFEDCERLEPIGRKIARKCKGLPLAAKVIGNLLRSKITVKEWQRILDS-EMWKLEEIGQGLLAPLLLSYNDLPSNSMVKRCFSYCAVFPKDYSMDKEELISLWMAQGYFNAXXXXXXXXXXXXYFNILATRSFF---QEIEKDEDDDDFMRCKMHDIVHDFAQFVS 810
            I+  +G +K  L+LDD+W+      +       +  +G K++ TTR+  +   M     D + +  L   E W  F Q+       +    +  + RK+A KC GLPLA  VIG  +  K  V+EW+  +D    +  E  G   + P+L    D  +   VK CF YC++FP+DY M+KE LI  W+ +G+ +                 +  R+     + I K++        KMHD+V + A +++
Sbjct:  251 IYNVLGKQKFVLLLDDIWE--KVNLEVLGVPYPSRQNGCKVVFTTRSRDVCGRMRV--DDPMEVSCLEPNEAWELF-QMKVGENTLKGHPDIPELARKVAGKCCGLPLALNVIGETMACKRMVQEWRNAIDVLSSYAAEFPGMEQILPILKYSYDNLNKEQVKPCFLYCSLFPEDYRMEKERLIDYWICEGFIDENESRERALSQGYEIIGILVRACLLLEEAINKEQ-------VKMHDVVREMALWIA 488          
BLAST of CK933949 vs. ExPASy Swiss-Prot
Match: DRL16_ARATH (Probable disease resistance protein At1g61190 OS=Arabidopsis thaliana GN=At1g61190 PE=2 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 3.989e-21
Identity = 59/197 (29.95%), Postives = 102/197 (51.78%), Query Frame = 1
Query:   73 IHRSIGGKKIFLVLDDVWDGDSNKWDPFFFCLKNGLHGSKILVTTRNESIARMMGTTESDTISIEQLAEEECWLFFKQLAFFGRCFEDCERLEPI----GRKIARKCKGLPLAAKVIGNLLRSKITVKEWQRILDSEMWKLEEIG--QGLLAPLLLSYNDLPSNSMVKRCFSYCAVFPKDYSMDKEELISLWMAQGY 645
            IHR + GK+  L+LDD+W+      +       + ++  K+  TTR++ +   MG  +   + ++ L  E+ W  FK      +  ++  R +P+     R++A+KC+GLPLA   IG  + SK  V+EW+  +D       E    Q  + P+L    D   +  +K CF YCA+FP+D  +D + LI+ W+ +G+
Sbjct:  248 IHRVLKGKRFVLMLDDIWE--KVDLEAIGIPYPSEVNKCKVAFTTRDQKVCGQMG--DHKPMQVKCLEPEDAWELFKN-----KVGDNTLRSDPVIVGLAREVAQKCRGLPLALSCIGETMASKTMVQEWEHAIDVLTRSAAEFSDMQNKILPILKYSYDSLEDEHIKSCFLYCALFPEDDKIDTKTLINKWICEGF 435          
BLAST of CK933949 vs. ExPASy Swiss-Prot
Match: DRL12_ARATH (Probable disease resistance protein At1g59620 OS=Arabidopsis thaliana GN=At1g59620 PE=2 SV=2)

HSP 1 Score: 101.293 bits (251), Expect = 6.804e-21
Identity = 66/205 (32.20%), Postives = 109/205 (53.17%), Query Frame = 1
Query:   61 LMSHIHRSIGGKKIFLVLDDVW-DGDSNKWDPFFFCLKNGLHGSKILVTTRNESIARMMGTTESDTISIEQLAEEECWLFFKQLAFFGRC---FEDCERLEPIGRKIARKCKGLPLAAKVIGNLLRSKITVKEWQRILDSEMWKL-------EEIGQGLLAPLLLSYNDLPSNSMVKRCFSYCAVFPKDYSMDKEELISLWMAQG 642
            L   + R +G +K  +VLDD+W + D +  +P F   K    G K+L+T+RNE +A +           + L  EE W  F+++ F G     ++  E++E +G+++ + C GLPLA KV+G LL    T+ EW+RI  +    +       ++    +   L LS+ +LP    +K CF Y A FP+D+++D E+L   W A+G
Sbjct:  229 LQEKLFRLLGTRKALIVLDDIWREEDWDMIEPIFPLGK----GWKVLLTSRNEGVA-LRANPNGFIFKPDCLTPEESWTIFRRIVFPGENTTEYKVDEKMEELGKQMIKHCGGLPLALKVLGGLLVVHFTLDEWKRIYGNIKSHIVGGTSFNDKNMSSVYHILHLSFEELP--IYLKHCFLYLAQFPEDFTIDLEKLSYYWAAEG 426          
The following BLAST results are available for this feature:
BLAST of CK933949 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 62
Match NameE-valueIdentityDescription
DRL3_ARATH2.951e-2436.50Probable disease resistance protein At1g15890 OS=A... [more]
R13L3_ARATH1.122e-2330.77Putative disease resistance RPP13-like protein 3 O... [more]
DRL4_ARATH2.499e-2331.32Putative disease resistance protein At1g50180 OS=A... [more]
DRL32_ARATH7.270e-2329.57Probable disease resistance protein At5g43730 OS=A... [more]
DRL17_ARATH1.371e-2127.71Probable disease resistance protein At1g61300 OS=A... [more]
DRL40_ARATH1.791e-2129.64Probable disease resistance protein At5g63020 OS=A... [more]
DRL7_ARATH3.054e-2128.52Probable disease resistance protein At1g58390 OS=A... [more]
DRL1_ARATH3.054e-2127.60Probable disease resistance protein At1g12280 OS=A... [more]
DRL16_ARATH3.989e-2129.95Probable disease resistance protein At1g61190 OS=A... [more]
DRL12_ARATH6.804e-2132.20Probable disease resistance protein At1g59620 OS=A... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004543_C02 Developing fruit peel at 38 DAFB Citrus sinensis cDNA clone P38DAB10003_IIF_C02 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK933949 ID=CK933949; Name=CK933949; organism=Citrus sinensis; type=EST; length=814bp
GGGATCATTGAAGGTCTAGGCGAGTCAAAAGAAGCTTCTGGTTTAAGCGA
ATTCCAATCTCTTATGAGCCATATCCATAGATCAATTGGAGGAAAAAAAA
TTTTTCTTGTCTTAGATGATGTATGGGATGGGGATTCCAATAAATGGGAT
CCATTCTTCTTTTGTCTAAAGAATGGTCTCCACGGAAGTAAAATTTTGGT
AACCACACGTAATGAGTCAATTGCACGTATGATGGGAACAACAGAGTCAG
ATACTATCTCCATTGAACAACTGGCTGAAGAGGAATGCTGGTTGTTTTTC
AAGCAGTTAGCATTTTTCGGTCGCTGTTTCGAGGATTGTGAAAGATTAGA
ACCAATCGGGCGAAAAATTGCACGCAAGTGCAAAGGCCTGCCTCTTGCTG
CAAAGGTAATAGGGAATCTCTTGCGCTCTAAAATTACAGTAAAAGAGTGG
CAAAGAATTTTAGATAGTGAAATGTGGAAATTAGAAGAGATTGGGCAAGG
TCTTTTGGCTCCTTTGTTGTTGAGTTATAACGATTTGCCCTCCAATTCTA
TGGTAAAACGGTGCTTCTCATATTGTGCTGTCTTTCCAAAAGACTACAGT
ATGGATAAAGAAGAATTGATTAGTCTGTGGATGGCTCAAGGTTACTTTAA
CGCAGAAGAAGACGAAGAAATGGAGATGATTGGAGAAGAGTATTTCAACA
TCTTGGCAACACGCTCTTTCTTTCAAGAGATTGAAAAAGATGAGGATGAT
GATGATTTTATGAGGTGTAAGATGCATGACATAGTACATGATTTTGCCCA
ATTTGTAAGTAGAA
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