CK933949

Overview
NameCK933949
Unique NameCK933949
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length814
Libraries
Library NameType
Developing fruit peel at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
CK933949_ssr745 microsatellite CK933949_ssr745:745..756. BLAST: Citrus ESTs to Prunus persica proteins V1
Homology
BLAST of CK933949 vs. ExPASy Swiss-Prot
Match: RX24L_ARATH (Probable disease resistance protein RXW24L OS=Arabidopsis thaliana GN=RXW24L PE=2 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 8.887e-21
Identity = 78/263 (29.66%), Postives = 128/263 (48.67%), Query Frame = 1
Query:   61 LMSHIHRSIGGKKIFLVLDDVWDGDSNKWD---PFFFCLKNGLHGSKILVTTRNESIARMMGTTESDTISIEQLAEEECWLFFKQLAFFGRC---FEDCERLEPIGRKIARKCKGLPLAAKVIGNLLRSKITVKEWQRILDSEMWKLEEIGQG----LLAPLLLSYNDLPSNSMVKRCFSYCAVFPKDYSMDKEELISLWMAQGYF--NAXXXXXXXXXXXXYFNILATRSFFQEIEKDEDDDDFMRCKMHDIVHDFAQFVSR 813
            L   + R +   K  +VLDD+W  +   WD   P F   K    G K+L+T+R ESIA M G T   +   + L+  + W  F+ +A   +    F+  E +E +G+K+ + C GL LA KV+G LL +K T+ +W+R+ ++    + E   G    +   L +S+ +LP  + +K CF Y A FP+D+ +D E+L   W A+G                  Y   L  R+     E+D     F  C++HD++ +   F ++
Sbjct:  254 LHDDLFRLLESSKTLIVLDDIWKEED--WDLIKPIFPPKK----GWKVLLTSRTESIA-MRGDTTYISFKPKCLSIPDSWTLFQSIAMPRKDTSEFKVDEEMENMGKKMIKHCGGLSLAVKVLGGLLAAKYTLHDWKRLSENIGSHIVERTSGNNSSIDHVLSVSFEELP--NYLKHCFLYLAHFPEDHEIDVEKLHYYWAAEGISERRRYDGETIRDTGDSYIEELVRRNMVIS-ERDVMTSRFETCRLHDMMREICLFKAK 506          
BLAST of CK933949 vs. ExPASy Swiss-Prot
Match: DRL27_ARATH (Disease resistance protein At4g27190 OS=Arabidopsis thaliana GN=At4g27190 PE=2 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 8.887e-21
Identity = 74/243 (30.45%), Postives = 115/243 (47.33%), Query Frame = 1
Query:   94 KKIFLVLDDVWDGDSNKWDPFFFCLKNGLHGSKILVTTRNESIARMMGTTESDTISIEQLAEEECW-LFFKQLAFFGRCFEDCERLEPIGRKIARKCKGLPLAAKVIGNLLRSKITVKEWQRILD----SEMWKLEEIGQGLLAPLLLSYNDLPSNSMVKRCFSYCAVFPKDYSMDKEELISLWMAQGYFNAXXXXXXXXXXXXYFNILATRSFFQEIEKDEDDDDFMRCKMHDIVHDFAQFV 807
            +K  L+LDDVW       D           GSK+++T+R   + R M T     + ++ L EE+ W LF K      R     + +  I + ++++C GLPLA   +G  +R K  VK W  +L     S  W ++ I + +  PL LSY+ L   +  K CF  CA+FP+DYS++  E++  WMA+G+                   + T    ++    ED D     KMHD+V DFA ++
Sbjct:  247 RKFLLILDDVWKPID--LDLLGIPRTEENKGSKVILTSRFLEVCRSMKTDLD--VRVDCLLEEDAWELFCKNAGDVVRS----DHVRKIAKAVSQECGGLPLAIITVGTAMRGKKNVKLWNHVLSKLSKSVPW-IKSIEEKIFQPLKLSYDFLEDKA--KFCFLLCALFPEDYSIEVTEVVRYWMAEGFMEELGSQEDSMNEG-----ITTVESLKDYCLLEDGDRRDTVKMHDVVRDFAIWI 473          
BLAST of CK933949 vs. ExPASy Swiss-Prot
Match: DRL15_ARATH (Probable disease resistance protein At1g61180 OS=Arabidopsis thaliana GN=At1g61180 PE=2 SV=2)

HSP 1 Score: 100.523 bits (249), Expect = 1.161e-20
Identity = 68/249 (27.31%), Postives = 119/249 (47.79%), Query Frame = 1
Query:   73 IHRSIGGKKIFLVLDDVWDGDSNKWDPFFFCLKNGLHGSKILVTTRNESIARMMGTTESDTISIEQLAEEECWLFFKQLAFFGRCFEDCERLEPIGRKIARKCKGLPLAAKVIGNLLRSKITVKEWQ---RILDSEMWKLEEIGQGLLAPLLLSYNDLPSNSMVKRCFSYCAVFPKDYSMDKEELISLWMAQGYFNAXXXXXXXXXXXXYFNILATRSFFQEIEKDEDDDDFMRCKMHDIVHDFAQFVS 810
            IHR + GK+  L+LDD+W+      +       + ++  K+  TTR+  +   MG  +   + +  L  E+ W  FK          D   +E + R++A+KC+GLPLA  VIG  + SK  V+EW+    + ++   +  ++   +L  L  SY+ L  +  +K CF YCA+FP+D  +  E+LI  W+ +G+                + +L T +    + K         C MHD+V + A +++
Sbjct:  247 IHRVLKGKRFVLMLDDIWE--KVDLEAIGIPYPSEVNKCKVAFTTRSREVCGEMG--DHKPMQVNCLEPEDAWELFKNKVGDNTLSSDPVIVE-LAREVAQKCRGLPLALNVIGETMSSKTMVQEWEHAIHVFNTSAAEFSDMQNKILPILKYSYDSL-GDEHIKSCFLYCALFPEDGEIYNEKLIDYWICEGFIGEDQVIKRARNKG--YAMLGTLTRANLLTK----VGTYYCVMHDVVREMALWIA 483          
BLAST of CK933949 vs. ExPASy Swiss-Prot
Match: DRL10_ARATH (Probable disease resistance protein RDL5/RF45 OS=Arabidopsis thaliana GN=RDL5 PE=1 SV=2)

HSP 1 Score: 100.523 bits (249), Expect = 1.161e-20
Identity = 84/288 (29.17%), Postives = 128/288 (44.44%), Query Frame = 1
Query:    4 IIEGLGESKEASGLSEF--QSLMSHIHRSIGGKKIFLVLDDVWDGDSNKWD---PFFFCLKNGLHGSKILVTTRNESIARMMGTTESDTISIEQLAEEECWLFFKQLAFFGRC---FEDCERLEPIGRKIARKCKGLPLAAKVIGNLLRSKITVKEWQRILDSEMWKLEEIGQGLLA---------------PLLLSYNDLPSNSMVKRCFSYCAVFPKDYSMDKEELISLWMAQGYFNA--XXXXXXXXXXXXYFNILATRSFFQEIEKDEDDDDFMRCKMHDIVHD 792
            I+  L   +E   + E    +L   + R +   K  +VLDD+W+ +   W+   P F   K    G K+L+T+RNES+A M   T       E L  E+ W  F+++A   +    F+  E  E +G+ + + C GLPLA +V+G +L  K T  +W+R+        E IG  L+                 L LS+ +LP  S +K CF Y A FP+DY +  E L   W A+G F                Y   L  R+     E+D     F  C +HD++ +
Sbjct:  234 ILRDLKPKEEEKKIMEMTQDTLQGELIRLLETSKSLIVLDDIWEKED--WELIKPIFPPTK----GWKVLLTSRNESVA-MRRNTSYINFKPECLTTEDSWTLFQRIALPMKDAAEFKIDEEKEELGKLMIKHCGGLPLAIRVLGGMLAEKYTSHDWRRL-------SENIGSHLVGGRTNFNDDNNNTCNNVLSLSFEELP--SYLKHCFLYLAHFPEDYEIKVENLSYYWAAEGIFQPRHYDGETIRDVGDVYIEELVRRNMVIS-ERDVKTSRFETCHLHDMMRE 504          
BLAST of CK933949 vs. ExPASy Swiss-Prot
Match: DRL9_ARATH (Probable disease resistance protein At1g58602 OS=Arabidopsis thaliana GN=At1g58602 PE=2 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 2.586e-20
Identity = 83/280 (29.64%), Postives = 126/280 (45.00%), Query Frame = 1
Query:   22 ESKEASGLSEFQSLMSHIHRSIGGKKIFLVLDDVWDGDSNKWD---PFFFCLKNGLHGSKILVTTRNESIARMMGTTESDTISIEQLAEEECWLFFKQLAF---FGRCFEDCERLEPIGRKIARKCKGLPLAAKVIGNLLRSKITVKEWQRILDSEMWKLEEIGQGLLA---------------PLLLSYNDLPSNSMVKRCFSYCAVFPKDYSMDKEELISLWMAQGYFNA--XXXXXXXXXXXXYFNILATRSFFQEIEKDEDDDDFMRCKMHDIVHD 792
            E K+   ++E+ +L   +++ +   K  +VLDD+W  +   W+   P F   K    G K+L+T+RNESI     T   +    E L  ++ W  F+++AF       FE  E +E +G K+   C GLPLA KV+G +L  K T  +W+R+        E IG  L+                 L LS+ +LP  S +K CF Y A FP+DY +  E L   W A+  F                Y   L  R+     E+D     F  C +HD++ +
Sbjct:  247 EEKKILEMTEY-TLQRELYQLLEMSKSLIVLDDIWKKED--WEVIKPIFPPTK----GWKLLLTSRNESIVAPTNTKYFN-FKPECLKTDDSWKLFQRIAFPINDASEFEIDEEMEKLGEKMIEHCGGLPLAIKVLGGMLAEKYTSHDWRRL-------SENIGSHLVGGRTNFNDDNNNSCNYVLSLSFEELP--SYLKHCFLYLAHFPEDYEIKVENLSYYWAAEEIFQPRHYDGEIIRDVGDVYIEELVRRNMVIS-ERDVKTSRFETCHLHDMMRE 508          
BLAST of CK933949 vs. ExPASy Swiss-Prot
Match: DRL5_ARATH (Probable disease resistance protein At1g51480 OS=Arabidopsis thaliana GN=At1g51480 PE=2 SV=2)

HSP 1 Score: 99.3673 bits (246), Expect = 2.586e-20
Identity = 66/200 (33.00%), Postives = 107/200 (53.50%), Query Frame = 1
Query:   67 SHIHRSIGGKKIFLVLDDVW-DGDSNKWDPFFFCLKNGLHGSKILVTTRNESIARMMGTTESDTISIEQLAEEECWLFFKQLAFFGRCFEDCERLEPIGRKIARKCKGLPLAAKVIGNLLRSKITVKEWQR---ILDSEMW-KLEEIGQGLLAPLLLSYNDLPSNSMVKRCFSYCAVFPKDYSMDKEELISLWMAQGYFN 651
            S I+ ++  KK  L+LDD+W + D NK        +NG   +KI+ T R++ +++ M       I +  L+ +E W  F+ +          E +  + R +A KC GLPLA  VIG  +  K T++EW     +L+S    K   + + +L  L  SY+ L  N  +K CF YC++FP+D+ ++KE+LI  W+ +GY N
Sbjct:  245 SLINNNLKRKKFVLLLDDLWSEVDLNKIGVPPPTRENG---AKIVFTKRSKEVSKYMKADMQ--IKVSCLSPDEAWELFR-ITVDDVILSSHEDIPALARIVAAKCHGLPLALIVIGEAMACKETIQEWHHAINVLNSPAGHKFPGMEERILLVLKFSYDSL-KNGEIKLCFLYCSLFPEDFEIEKEKLIEYWICEGYIN 437          
BLAST of CK933949 vs. ExPASy Swiss-Prot
Match: DRL31_ARATH (Putative disease resistance protein At5g05400 OS=Arabidopsis thaliana GN=At5g05400 PE=2 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 2.586e-20
Identity = 77/257 (29.96%), Postives = 123/257 (47.86%), Query Frame = 1
Query:   61 LMSHIHRSIGGKKIFLVLDDVWDGDSNKWDPFFFCLKN-GL-----HGSKILVTTRNESIARMMGTTESDTISIEQLAEEECW-LFFKQLAFFGRCFEDCERLEPIGRKIARKCKGLPLAAKVIGNLLRSKITVKEWQRILDSEMWKLEEIGQGLLAPLLLSYNDLPSNSMVKRCFSYCAVFPKDYSMDKEELISLWMAQGYFNAXXXXXXXXXXXXYFNILATRSFFQEIEKDEDDDDFMRCKMHDIVHDFAQFVS 810
            + S I RS+  KK  L+LDD+W     K D     L N G+     +GSKI  T+R+  +   MG  +   I +  L  ++ W LF + +       E   ++  + + IARKC GLPLA  VIG  +  K +++EW       +     I   +L+ L  SY+DL      K CF + A+FP+DY + K++LI  W+ QG                 + I+ T +    +++ E  +   + KMHD+V + A ++S
Sbjct:  246 IASTIKRSLENKKYMLLLDDMW----TKVD-----LANIGIPVPKRNGSKIAFTSRSNEVCGKMGVDKE--IEVTCLMWDDAWDLFTRNMK---ETLESHPKIPEVAKSIARKCNGLPLALNVIGETMARKKSIEEWH----DAVGVFSGIEADILSILKFSYDDLKCEK-TKSCFLFSALFPEDYEIGKDDLIEYWVGQGIILGSKGINYKG-----YTIIGTLTRAYLLKESETKE---KVKMHDVVREMALWIS 475          
BLAST of CK933949 vs. ExPASy Swiss-Prot
Match: DRL28_ARATH (Probable disease resistance protein At4g27220 OS=Arabidopsis thaliana GN=At4g27220 PE=2 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 2.586e-20
Identity = 78/247 (31.58%), Postives = 116/247 (46.96%), Query Frame = 1
Query:   79 RSIGGKKIFLVLDDVWDGDSNKWDPFFFCLKNGLHGSKILVTTRNESIARMMGTTESDTISIEQLAEEECW-LFFKQLAFFGRCFEDCERLEPIGRKIARKCKGLPLAAKVIGNLLRSKITVKEWQRILDSEMWKLEEIG--QGLLAPLLLSYNDLPSNSMVKRCFSYCAVFPKDYSMDKEELISLWMAQGYFNAXXXXXXXXXXXXYFNILATRSFFQEIEKD----EDDDDFMRCKMHDIVHDFA 798
            R I  K   L+LDDVW             L+     SK+++T+R   + + M T E+  I +  L E+E W LF   +        + + ++PI + ++ +C GLPLA   IG  LR K  V+ W+  L+        I   + +   L LSY+ L  N  +K CF +CA+FP+DYS+   ELI  W+A+G  +             Y +++       E  KD    ED D     KMHD+V DFA
Sbjct:  211 RLIDLKNFLLILDDVWHPIDLDQLGIPLALERS-KDSKVVLTSRRLEVCQQMMTNEN--IKVACLQEKEAWELFCHNVGEVA----NSDNVKPIAKDVSHECCGLPLAIITIGRTLRGKPQVEVWKHTLNLLKRSAPSIDTEEKIFGTLKLSYDFLQDN--MKSCFLFCALFPEDYSIKVSELIMYWVAEGLLDG---------QHHYEDMMNEGVTLVERLKDSCLLEDGDSCDTVKMHDVVRDFA 439          
BLAST of CK933949 vs. ExPASy Swiss-Prot
Match: DRL2_ARATH (Probable disease resistance protein At1g12290 OS=Arabidopsis thaliana GN=At1g12290 PE=2 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 3.377e-20
Identity = 71/242 (29.34%), Postives = 112/242 (46.28%), Query Frame = 1
Query:   94 KKIFLVLDDVWDGDSNKWDPFFFCLKNGLHGSKILVTTRNESIARMMGTTESDTISIEQLAEEECWLFFKQLAFFGRCFEDCERLEPIGRKIARKCKGLPLAAKVIGNLLRSKITVKEWQRILDSEMWKLEEIG---QGLLAPLLLSYNDLPSNSMVKRCFSYCAVFPKDYSMDKEELISLWMAQGYFNAXXXXXXXXXXXXYFNILATRSFFQEIEKDEDDDDFMRCKMHDIVHDFAQFVS 810
            K+  L+LDD+W     +            +G KI  TTR +S+   MG    D + +  L  ++ W  FK+             +  I RK+A+ C GLPLA  VIG  +  K T +EW R +D         G   + +L  L  SY++L S S VK CF YC++FP+D  ++KE LI  W+ +G+ +              + IL T      + +    ++    KMHD+V + A +++
Sbjct:  257 KRFVLLLDDIWK--RVELTEIGIPNPTSENGCKIAFTTRCQSVCASMGV--HDPMEVRCLGADDAWDLFKKKVG-DITLSSHPDIPEIARKVAQACCGLPLALNVIGETMACKKTTQEWDRAVDVSTTYAANFGAVKERILPILKYSYDNLESES-VKTCFLYCSLFPEDDLIEKERLIDYWICEGFIDGDENKKGAVGEG--YEILGTLVCASLLVEGGKFNNKSYVKMHDVVREMALWIA 490          
BLAST of CK933949 vs. ExPASy Swiss-Prot
Match: DRL11_ARATH (Probable disease resistance protein RDL6/RF9 OS=Arabidopsis thaliana GN=RDL6 PE=2 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 3.377e-20
Identity = 83/288 (28.82%), Postives = 128/288 (44.44%), Query Frame = 1
Query:    4 IIEGLGESKEASGLSEF--QSLMSHIHRSIGGKKIFLVLDDVWDGDSNKWD---PFFFCLKNGLHGSKILVTTRNESIARMMGTTESDTISIEQLAEEECWLFFKQLAFFGRC---FEDCERLEPIGRKIARKCKGLPLAAKVIGNLLRSKITVKEWQRILDSEMWKLEEIGQGLLA---------------PLLLSYNDLPSNSMVKRCFSYCAVFPKDYSMDKEELISLWMAQGYFNA--XXXXXXXXXXXXYFNILATRSFFQEIEKDEDDDDFMRCKMHDIVHD 792
            I+  L   +E   + E    +L   + R +   K  +VLDD+W+ +   W+   P F   K    G K+L+T+RNES+A M   T       E L  E+ W  F+++A   +    F+  E  E +G+ + + C GLPLA +V+G +L  K T  +W+R+        E IG  L+                 L LS+ +LP  S +K CF Y A FP DY ++ + L   W A+G F                Y   L  R+     E+D     F  C +HD++ +
Sbjct:  234 ILRDLKPKEEEKKIMEMTQDTLQGELIRLLETSKSLIVLDDIWEKED--WELIKPIFPPTK----GWKVLLTSRNESVA-MRRNTSYINFKPECLTTEDSWTLFQRIALPMKDAAEFKIDEEKEELGKLMIKHCGGLPLAIRVLGGMLAEKYTSHDWRRL-------SENIGSHLVGGRTNFNDDNNNTCNYVLSLSFEELP--SYLKHCFLYLAHFPDDYEINVKNLSYYWAAEGIFQPRHYDGEIIRDVGDVYIEELVRRNMVIS-ERDVKTSRFETCHLHDMMRE 504          
The following BLAST results are available for this feature:
BLAST of CK933949 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 62
Match NameE-valueIdentityDescription
RX24L_ARATH8.887e-2129.66Probable disease resistance protein RXW24L OS=Arab... [more]
DRL27_ARATH8.887e-2130.45Disease resistance protein At4g27190 OS=Arabidopsi... [more]
DRL15_ARATH1.161e-2027.31Probable disease resistance protein At1g61180 OS=A... [more]
DRL10_ARATH1.161e-2029.17Probable disease resistance protein RDL5/RF45 OS=A... [more]
DRL9_ARATH2.586e-2029.64Probable disease resistance protein At1g58602 OS=A... [more]
DRL5_ARATH2.586e-2033.00Probable disease resistance protein At1g51480 OS=A... [more]
DRL31_ARATH2.586e-2029.96Putative disease resistance protein At5g05400 OS=A... [more]
DRL28_ARATH2.586e-2031.58Probable disease resistance protein At4g27220 OS=A... [more]
DRL2_ARATH3.377e-2029.34Probable disease resistance protein At1g12290 OS=A... [more]
DRL11_ARATH3.377e-2028.82Probable disease resistance protein RDL6/RF9 OS=Ar... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004543_C02 Developing fruit peel at 38 DAFB Citrus sinensis cDNA clone P38DAB10003_IIF_C02 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK933949 ID=CK933949; Name=CK933949; organism=Citrus sinensis; type=EST; length=814bp
GGGATCATTGAAGGTCTAGGCGAGTCAAAAGAAGCTTCTGGTTTAAGCGA
ATTCCAATCTCTTATGAGCCATATCCATAGATCAATTGGAGGAAAAAAAA
TTTTTCTTGTCTTAGATGATGTATGGGATGGGGATTCCAATAAATGGGAT
CCATTCTTCTTTTGTCTAAAGAATGGTCTCCACGGAAGTAAAATTTTGGT
AACCACACGTAATGAGTCAATTGCACGTATGATGGGAACAACAGAGTCAG
ATACTATCTCCATTGAACAACTGGCTGAAGAGGAATGCTGGTTGTTTTTC
AAGCAGTTAGCATTTTTCGGTCGCTGTTTCGAGGATTGTGAAAGATTAGA
ACCAATCGGGCGAAAAATTGCACGCAAGTGCAAAGGCCTGCCTCTTGCTG
CAAAGGTAATAGGGAATCTCTTGCGCTCTAAAATTACAGTAAAAGAGTGG
CAAAGAATTTTAGATAGTGAAATGTGGAAATTAGAAGAGATTGGGCAAGG
TCTTTTGGCTCCTTTGTTGTTGAGTTATAACGATTTGCCCTCCAATTCTA
TGGTAAAACGGTGCTTCTCATATTGTGCTGTCTTTCCAAAAGACTACAGT
ATGGATAAAGAAGAATTGATTAGTCTGTGGATGGCTCAAGGTTACTTTAA
CGCAGAAGAAGACGAAGAAATGGAGATGATTGGAGAAGAGTATTTCAACA
TCTTGGCAACACGCTCTTTCTTTCAAGAGATTGAAAAAGATGAGGATGAT
GATGATTTTATGAGGTGTAAGATGCATGACATAGTACATGATTTTGCCCA
ATTTGTAAGTAGAA
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