CK933949

Overview
NameCK933949
Unique NameCK933949
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length814
Libraries
Library NameType
Developing fruit peel at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
CK933949_ssr745 microsatellite CK933949_ssr745:745..756. BLAST: Citrus ESTs to Prunus persica proteins V1
Homology
BLAST of CK933949 vs. ExPASy Swiss-Prot
Match: DRL33_ARATH (Probable disease resistance protein At5g43740 OS=Arabidopsis thaliana GN=At5g43740 PE=2 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 5.760e-20
Identity = 74/252 (29.37%), Postives = 122/252 (48.41%), Query Frame = 1
Query:   67 SHIHRSIGGKKIFLVLDDVW-DGDSNKWDPFFFCLKNGLHGSKILVTTRNESIARMMGTTESDTISIEQLAEEECWLFFKQLAFFGRCFEDCERLEPIGRKIARKCKGLPLAAKVIGNLLRSKITVKEWQR---ILDSEMWKLEEIGQGLLAPLLLSYNDLPSNSMVKRCFSYCAVFPKDYSMDKEELISLWMAQGYFNAXXXXXXXXXXXXYFNILATRSFFQEIEKDEDDDDFMRCKMHDIVHDFAQFVS 810
            S I+ ++  KK  L+LDD+W + D  K        +NG   SKI+ TTR+  + + M   +   I +  L+ +E W  F+ L          + +  + R +A KC GLPLA  VIG  +  K T++EW     +L+S   +   + + +L  L  SY+ L  N  +K CF YC++FP+D  + KE+ I  W+ +G+ N                 L  R+    IE +  D+     KMHD++ + A +++
Sbjct:  243 SLIYNNLERKKFVLLLDDLWSEVDMTKIGVPPPTRENG---SKIVFTTRSTEVCKHMKADKQ--IKVACLSPDEAWELFR-LTVGDIILRSHQDIPALARIVAAKCHGLPLALNVIGKAMSCKETIQEWSHAINVLNSAGHEFPGMEERILPILKFSYDSL-KNGEIKLCFLYCSLFPEDSEIPKEKWIEYWICEGFINPNRYEDGGTNHGYDIIGLLVRAHLL-IECELTDN----VKMHDVIREMALWIN 482          
BLAST of CK933949 vs. ExPASy Swiss-Prot
Match: DRL23_ARATH (Putative disease resistance protein At4g10780 OS=Arabidopsis thaliana GN=At4g10780 PE=2 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 2.859e-19
Identity = 77/275 (28.00%), Postives = 129/275 (46.91%), Query Frame = 1
Query:    4 IIEGLGES-----KEASGLSEFQSLMSHIHRSIGGKKIFLVLDDVWDGDSNKWDPFFFCLKNGLHGSK--ILVTTRNESIARMMGTTESDTISIEQLAEEECWLFFKQLAFFGRCFEDCERLEPIGRKIARKCKGLPLAAKVIGNLLRSKITVKEWQRILD---SEMWKLEEIGQGLLAPLLLSYNDLPSNSMVKRCFSYCAVFPKDYSMDKEELISLWMAQGYFNAXXXXXXXXXXXXYFNILATRSFFQEIEKDEDDDDFMRCKMHDIVHDFA 798
            I E +GE      KE +   E Q  +  I   +  K+  L+LDD+W     K D     + +    +K  ++ TTR+  +   MG    D + ++ L+  + W  F++           + LE + +K+A KC+GLPLA  VIG  +  K  V+EW   +D   S   +   +   +L  L  SY++L ++  V+ CF YCA++P+DYS+ K  LI  W+ +G+ +              + IL T    +     E+  + +  KMHD+V + A
Sbjct:  221 IQEDIGEKLGFIGKEWNKKQESQKAVD-ILNCLSKKRFVLLLDDIW----KKVDLTKIGIPSQTRENKCKVVFTTRSLDVCARMGV--HDPMEVQCLSTNDAWELFQEKVGQISLGSHPDILE-LAKKVAGKCRGLPLALNVIGETMAGKRAVQEWHHAVDVLTSYAAEFSGMDDHILLILKYSYDNL-NDKHVRSCFQYCALYPEDYSIKKYRLIDYWICEGFIDGNIGKERAVNQG--YEILGT--LVRACLLSEEGKNKLEVKMHDVVREMA 482          
BLAST of CK933949 vs. ExPASy Swiss-Prot
Match: RP8L3_ARATH (Disease resistance RPP8-like protein 3 OS=Arabidopsis thaliana GN=RPP8L3 PE=2 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 6.369e-19
Identity = 77/243 (31.69%), Postives = 114/243 (46.91%), Query Frame = 1
Query:   97 KIFLVLDDVWDGDSNKWDPF--FFCLKNGLHGSKILVTTRNESIARMMGTTESDTISIEQLAEEECWLFFKQLAFFGRCFEDCERLEPIGRKIARKCKGLPLAAKVIGNLLRSKITVKEWQRILDSEMWKLEEIGQGLLAP---------LLLSYNDLPSNSMVKRCFSYCAVFPKDYSMDKEELISLWMAQGYFNAXXXXXXXXXXXXYFNILATRSFFQEIEKDEDDDDFMRCKMHDIVHD 792
            +  +VLDDVW  +   WD     F  K G    K+L+T+RNE +      T   +     L  +E W  F+++    R   + E +E IG+++   C GLPLA KV+G LL +K T  EW+R+  SE    + +G+  L           L LSY DLP++  +K CF Y A FP+DY +    L S W A+G ++             Y   L  R+     EK         C+MHD++ +
Sbjct:  265 RYLVVLDDVWKEED--WDRIKEVFPRKRGW---KMLLTSRNEGVGLHADPT-CLSFRARILNPKESWKLFERIVP-RRNETEYEEMEAIGKEMVTYCGGLPLAVKVLGGLLANKHTASEWKRV--SENIGAQIVGKSCLDDNSLNSVYRILSLSYEDLPTD--LKHCFLYLAHFPEDYKIKTRTLYSYWAAEGIYDG---LTILDSGEDYLEELVRRNLV-IAEKSNLSWRLKLCQMHDMMRE 492          
BLAST of CK933949 vs. ExPASy Swiss-Prot
Match: RP8L2_ARATH (Probable disease resistance RPP8-like protein 2 OS=Arabidopsis thaliana GN=RPP8L2 PE=1 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 6.369e-19
Identity = 69/252 (27.38%), Postives = 112/252 (44.44%), Query Frame = 1
Query:   58 SLMSHIHRSIGGKKIFLVLDDVWDGDSNKWDPFFFCLKNGLHGSKILVTTRNESIARMMGTTESDTISIEQLAEEECWLFFKQLAFFGRCFEDCERLEPIGRKIARKCKGLPLAAKVIGNLLRSKITVKEWQRILDSEMWKL-------EEIGQGLLAPLLLSYNDLPSNSMVKRCFSYCAVFPKDYSMDKEELISLWMAQGYFNAXXXXXXXXXXXXYFNILATRSFFQEIEKDEDDDDFMRCKMHDIVHD 792
            +L   +   +   +  LVLDDVW  +   WD       +   G K+L+T+RNE +      T         L  E+ W  F+++    R   + +  E +G+++   C GLPLA KV+G LL  K TV EW+R+  + +  +       ++    +   L LSY DLP    +K CF Y A FP+DY +D + L + W+A+G                 +     R     +E+         C+MHD++ +
Sbjct:  252 TLQGELFELLESGRYLLVLDDVWKEED--WDRIKAVFPHK-RGWKMLLTSRNEGLGLHADPT-CFAFRPRILTPEQSWKLFERIVSSRRDKTEFKVDEAMGKEMVTYCGGLPLAVKVLGGLLAKKHTVLEWKRVHSNIVTHIVGKSGLSDDNSNSVYRVLSLSYEDLP--MQLKHCFFYLAHFPEDYKIDVKILFNYWVAEGIITPFHDGSTIQDTGESYLEELVRRNMVVVEESYLTSRIEYCQMHDMMRE 497          
BLAST of CK933949 vs. ExPASy Swiss-Prot
Match: R1B17_SOLDE (Putative late blight resistance protein homolog R1B-17 OS=Solanum demissum GN=R1B-17 PE=3 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 1.086e-18
Identity = 58/249 (23.29%), Postives = 121/249 (48.59%), Query Frame = 1
Query:   61 LMSHIHRSIGGKKIFLVLDDVWDGDSNKWDPFFFCLKNGLHGSKILVTTRNESIARMMGTTESDTISIEQLAEEECWLFFKQLAFFG-RCFEDCERLEPIGRKIARKCKGLPLAAKVIGNLLRS-KITVKEWQRILDSEMWKLEEIGQGLLAPLLLSYNDLPSNSMVKRCFSYCAVFPKDYSMDKEELISLWMAQGYFNAXXXXXXXXXXXXYFNILATRSFFQEIEKDEDDDDFMRCKMHDIVHDFAQ 801
            L   + +++  ++  +++DDVWD  +  WD    C  +  + S+I++TTR+  +A+   +  SD + +    E+E W   ++  F   RC      L+ +G +IA+ C+ LPL+  ++  +L   +  V+ W+++ ++    +    + ++     SY+ LP +  +K CF Y   F +D  +D   LI LW+++ +  +            Y   L  R+     ++ + D     C++HD++ DF +
Sbjct:  631 LADKLRKTLLSRRYLILVDDVWDNSA--WDDLRGCFPDANNRSRIILTTRHHEVAKY-ASVHSDPLHLRMFDEDESWKLLEKKVFGEKRC--SSLLLKDVGLRIAKMCEQLPLSIVLVAGILSEMEKEVECWEQVANNLGTHIHNDSRAIVNQ---SYHVLPCH--LKSCFLYFGAFLEDEVIDISRLIRLWISESFIKSSEGRRLEDIAEGYLENLIGRNLVMVTQRADSDGKVKACRLHDVLLDFCK 869          
BLAST of CK933949 vs. ExPASy Swiss-Prot
Match: DRL37_ARATH (Probable disease resistance protein At5g47250 OS=Arabidopsis thaliana GN=At5g47250 PE=2 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 1.086e-18
Identity = 61/190 (32.11%), Postives = 102/190 (53.68%), Query Frame = 1
Query:   97 KIFLVLDDVWDGDSNKWDPFFFCLKNGLHGSK--ILVTTRNESIARMMGTTESDTISIEQLAEEECWLFFKQLAFFGRCFEDCERLEPIGRKIARKCKGLPLAAKVIGNLLRSKITVKEWQRILDS-EMWKLEEIG--QGLLAPLLLSYNDLPSNSMVKRCFSYCAVFPKDYSMDKEELISLWMAQGYFN 651
            +  L+LDD+W+      D     +   + G K  ++ TTR++ +  +M   E   I ++ L+E + W  F        C +    +  I +KI  KC GLPLA +VI   + SK TV +W+R LD+ E ++ E  G  +G+   L LSY+ L + +   +CF YCA+FPK Y + ++EL+  W+ +G+ +
Sbjct:  261 RFVLLLDDLWE------DVSLTAIGIPVLGKKYKVVFTTRSKDVCSVMRANED--IEVQCLSENDAWDLFDMKV---HC-DGLNEISDIAKKIVAKCCGLPLALEVIRKTMASKSTVIQWRRALDTLESYRSEMKGTEKGIFQVLKLSYDYLKTKN--AKCFLYCALFPKAYYIKQDELVEYWIGEGFID 436          
BLAST of CK933949 vs. ExPASy Swiss-Prot
Match: R1C3_SOLDE (Putative late blight resistance protein homolog R1C-3 OS=Solanum demissum GN=R1C-3 PE=3 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 1.853e-18
Identity = 62/266 (23.31%), Postives = 127/266 (47.74%), Query Frame = 1
Query:   10 EGLGESKEASGLSEFQSLMSHIHRSIGGKKIFLVLDDVWDGDSNKWDPFFFCLKNGLHGSKILVTTRNESIARMMGTTESDTISIEQLAEEECWLFFKQLAFFGRCFEDCERL-EPIGRKIARKCKGLPLAAKVIGNLLRS-KITVKEWQRILDSEMWKLEEIGQGLLAPLLLSYNDLPSNSMVKRCFSYCAVFPKDYSMDKEELISLWMAQGYFNAXXXXXXXXXXXXYFNILATRSFFQEIEKDEDDDDFMRCKMHDIVHDFAQ 801
            + +GE    + L     L   + +++  ++  +++DDVW+  ++ WD    C  +  + S+I++TTR+  +A+   +  SD + +    E E W   ++  F     E C  L   IG++IA+ C  LPL+  ++  +L   +  V+ W+++ ++    +    + ++     SY+ LP +  +K CF Y   F +D  +D   LI LW+++ +  +            Y   L  R+     ++D+ D     C++HD++ DF +
Sbjct:  585 DAIGEGSVRTELHA-NELADMLRKTLLPRRYLILVDDVWE--NSVWDDLSGCFPDVNNRSRIILTTRHHEVAKY-ASVHSDPLHLRMFDEVESWKLLEKKVFGE---ESCSPLLRDIGQRIAKMCGQLPLSIVLVAGILSEMEKEVEYWEQVANNLGTHIHNDSRAVVDQ---SYHVLPCH--LKSCFLYFGAFLEDRVIDISRLIRLWISESFVKSCEGRSLEDIAEGYLENLIGRNLVMVTQRDDSDGKVKACRLHDVLLDFCK 838          
BLAST of CK933949 vs. ExPASy Swiss-Prot
Match: R1B14_SOLDE (Putative late blight resistance protein homolog R1B-14 OS=Solanum demissum GN=R1B-14 PE=3 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 2.420e-18
Identity = 58/249 (23.29%), Postives = 120/249 (48.19%), Query Frame = 1
Query:   61 LMSHIHRSIGGKKIFLVLDDVWDGDSNKWDPFFFCLKNGLHGSKILVTTRNESIARMMGTTESDTISIEQLAEEECWLFFKQLAFFG-RCFEDCERLEPIGRKIARKCKGLPLAAKVIGNLLRS-KITVKEWQRILDSEMWKLEEIGQGLLAPLLLSYNDLPSNSMVKRCFSYCAVFPKDYSMDKEELISLWMAQGYFNAXXXXXXXXXXXXYFNILATRSFFQEIEKDEDDDDFMRCKMHDIVHDFAQ 801
            L   + +++  ++  +++DDVWD  +  WD    C  +  + S+I++TTR+  +A+   +  SD + +    E+E W   ++  F   RC      L+ +G +IA+ C  LPL+  ++  +L   +  V+ W+++ ++    +    + ++     SY+ LP +  +K CF Y   F +D  +D   LI LW+++ +  +            Y   L  R+     ++ + D     C++HD++ DF +
Sbjct:  631 LADKLRKTLLSRRYLILVDDVWDNSA--WDDLRGCFPDANNRSRIILTTRHHEVAKY-ASVHSDPLHLRMFDEDESWKLLEKKVFGEKRC--SSLLLKDVGLRIAKMCGQLPLSIVLVAGILSEMEKEVECWEQVANNLGTHIHNDSRAIVNQ---SYHVLPCH--LKSCFLYFGAFLEDEVIDISRLIRLWISESFIKSSEGRRLEDIAEGYLENLIGRNLVMVTQRADSDGKVKACRLHDVLLDFCK 869          
BLAST of CK933949 vs. ExPASy Swiss-Prot
Match: R1B23_SOLDE (Putative late blight resistance protein homolog R1B-23 OS=Solanum demissum GN=R1B-23 PE=3 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 3.161e-18
Identity = 62/266 (23.31%), Postives = 127/266 (47.74%), Query Frame = 1
Query:   10 EGLGESKEASGLSEFQSLMSHIHRSIGGKKIFLVLDDVWDGDSNKWDPFFFCLKNGLHGSKILVTTRNESIARMMGTTESDTISIEQLAEEECWLFFKQLAFFGRCFEDCERL-EPIGRKIARKCKGLPLAAKVIGNLLRS-KITVKEWQRILDSEMWKLEEIGQGLLAPLLLSYNDLPSNSMVKRCFSYCAVFPKDYSMDKEELISLWMAQGYFNAXXXXXXXXXXXXYFNILATRSFFQEIEKDEDDDDFMRCKMHDIVHDFAQ 801
            + +GE    + L     L   + +++  ++  +++DDVW+  ++ WD    C  +  + S+I++TTR+  +A+   +  SD + +    E E W   ++  F     E C  L   IG++IA+ C  LPL+  ++  +L   +  V+ W+++ ++    +    + ++     SY+ LP +  +K CF Y   F +D  +D   LI LW+++ +  +            Y   L  R+     ++D+ D     C++HD++ DF +
Sbjct:  555 DAIGEGSVRTELHA-NELADMLRKTLLPRRYLILVDDVWE--NSVWDDLSGCFPDVNNRSRIILTTRHHEVAKY-ASVHSDPLHLRMFDEVESWKLLEKKVFGE---ESCSPLLRDIGQRIAKMCGQLPLSIVLVAGILSEMEKEVECWEQVANNLGTHIHNDSRAVVDQ---SYHVLPCH--LKSCFLYFGAFLEDRVIDIPRLIRLWISESFIKSCEGRSLEDIAEGYLENLIGRNLVMVTQRDDSDGKVKACRLHDVLLDFCK 808          
BLAST of CK933949 vs. ExPASy Swiss-Prot
Match: DRL18_ARATH (Probable disease resistance protein At1g61310 OS=Arabidopsis thaliana GN=At1g61310 PE=2 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 3.161e-18
Identity = 66/253 (26.09%), Postives = 110/253 (43.48%), Query Frame = 1
Query:   73 IHRSIGGKKIFLVLDDVWDGDSNKWDPFFFCLKNGLHGSKILVTTRNESIARMMGTTESDTISIEQLAEEECWLFFKQLAFFGRCFEDCERLEPIGRKIARKCKGLPLAAKVIGNLLRSKITVKEWQRILDSEMWKLEEIG--QGLLAPLLLSYNDLPSNSMVKRCFSYCAVFPKDYSMDKEELISLWMAQGYFNAXXXXXXXXXXXXYFNILATRSFF-----QEIEKDEDDDDFMRCKMHDIVHDFAQFVS 810
            IHR + GK+  L+LDD+W+      +       + ++  K+  TTR+  +   MG  +   + +  L  E+ W  FK          D   +  + R++A+KC+GLPLA  VIG  + SK  V+EW+  +D       E    +  + P+L    D   +  +K CF YCA+FP+D  +  E LI   + +G+                     TR+        E+           C MHD+V + A +++
Sbjct:  249 IHRVLKGKRFVLMLDDIWE--KVDLEAIGIPYPSEVNKCKVAFTTRSREVCGEMG--DHKPMQVNCLEPEDAWELFKNKVGDNTLSSD-PVIVGLAREVAQKCRGLPLALNVIGETMASKTMVQEWEYAIDVLTRSAAEFSGMENKILPILKYSYDSLGDEHIKSCFLYCALFPEDGQIYTETLIDKLICEGFIGEDQVIKRARNKGYAMLGTLTRANLLTKVGTELANLLTKVSIYHCVMHDVVREMALWIA 496          
The following BLAST results are available for this feature:
BLAST of CK933949 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 62
Match NameE-valueIdentityDescription
DRL33_ARATH5.760e-2029.37Probable disease resistance protein At5g43740 OS=A... [more]
DRL23_ARATH2.859e-1928.00Putative disease resistance protein At4g10780 OS=A... [more]
RP8L3_ARATH6.369e-1931.69Disease resistance RPP8-like protein 3 OS=Arabidop... [more]
RP8L2_ARATH6.369e-1927.38Probable disease resistance RPP8-like protein 2 OS... [more]
R1B17_SOLDE1.086e-1823.29Putative late blight resistance protein homolog R1... [more]
DRL37_ARATH1.086e-1832.11Probable disease resistance protein At5g47250 OS=A... [more]
R1C3_SOLDE1.853e-1823.31Putative late blight resistance protein homolog R1... [more]
R1B14_SOLDE2.420e-1823.29Putative late blight resistance protein homolog R1... [more]
R1B23_SOLDE3.161e-1823.31Putative late blight resistance protein homolog R1... [more]
DRL18_ARATH3.161e-1826.09Probable disease resistance protein At1g61310 OS=A... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004543_C02 Developing fruit peel at 38 DAFB Citrus sinensis cDNA clone P38DAB10003_IIF_C02 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK933949 ID=CK933949; Name=CK933949; organism=Citrus sinensis; type=EST; length=814bp
GGGATCATTGAAGGTCTAGGCGAGTCAAAAGAAGCTTCTGGTTTAAGCGA
ATTCCAATCTCTTATGAGCCATATCCATAGATCAATTGGAGGAAAAAAAA
TTTTTCTTGTCTTAGATGATGTATGGGATGGGGATTCCAATAAATGGGAT
CCATTCTTCTTTTGTCTAAAGAATGGTCTCCACGGAAGTAAAATTTTGGT
AACCACACGTAATGAGTCAATTGCACGTATGATGGGAACAACAGAGTCAG
ATACTATCTCCATTGAACAACTGGCTGAAGAGGAATGCTGGTTGTTTTTC
AAGCAGTTAGCATTTTTCGGTCGCTGTTTCGAGGATTGTGAAAGATTAGA
ACCAATCGGGCGAAAAATTGCACGCAAGTGCAAAGGCCTGCCTCTTGCTG
CAAAGGTAATAGGGAATCTCTTGCGCTCTAAAATTACAGTAAAAGAGTGG
CAAAGAATTTTAGATAGTGAAATGTGGAAATTAGAAGAGATTGGGCAAGG
TCTTTTGGCTCCTTTGTTGTTGAGTTATAACGATTTGCCCTCCAATTCTA
TGGTAAAACGGTGCTTCTCATATTGTGCTGTCTTTCCAAAAGACTACAGT
ATGGATAAAGAAGAATTGATTAGTCTGTGGATGGCTCAAGGTTACTTTAA
CGCAGAAGAAGACGAAGAAATGGAGATGATTGGAGAAGAGTATTTCAACA
TCTTGGCAACACGCTCTTTCTTTCAAGAGATTGAAAAAGATGAGGATGAT
GATGATTTTATGAGGTGTAAGATGCATGACATAGTACATGATTTTGCCCA
ATTTGTAAGTAGAA
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