CK933949

Overview
NameCK933949
Unique NameCK933949
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length814
Libraries
Library NameType
Developing fruit peel at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
CK933949_ssr745 microsatellite CK933949_ssr745:745..756. BLAST: Citrus ESTs to Prunus persica proteins V1
Homology
BLAST of CK933949 vs. ExPASy Swiss-Prot
Match: R1B16_SOLDE (Putative late blight resistance protein homolog R1B-16 OS=Solanum demissum GN=R1B-16 PE=3 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 7.041e-18
Identity = 58/267 (21.72%), Postives = 127/267 (47.57%), Query Frame = 1
Query:    4 IIEGLGESKEASGLSEFQSLMSHIHRSIGGKKIFLVLDDVWDGDSNKWDPFFFCLKNGLHGSKILVTTRNESIARMMGTTESDTISIEQLAEEECWLFFKQLAFFGRCFEDCERLEPIGRKIARKCKGLPLAAKVIGNLLRS-KITVKEWQRILDSEMWKLEEIGQGLLAPLLLSYNDLPSNSMVKRCFSYCAVFPKDYSMDKEELISLWMAQGYFNAXXXXXXXXXXXXYFNILATRSFFQEIEKDEDDDDFMRCKMHDIVHDFAQ 801
            + + +GE  +   L +   L   + +++  ++  +++DDVWD  +  WD    C  +  + S+I++TTR+  +A+   +  SD + +    ++E W   ++  F  +       L+ +G +IA+ C  LPL+  ++  +L   +  V+ W+++ ++    +    + ++     SY+ LP +  +K CF Y   F +D  +D   LI LW+++ +  +            Y   L  R+     ++ + D     C++HD++ DF +
Sbjct:  612 LCDAVGEDSDRRELPD-NELADMLRKTLLPRRYLILVDDVWDNSA--WDDLRGCFPDVNNRSRIILTTRHHEVAKY-ASVHSDPLHLRMFDKDESWKLLEKKVFGEQSCSPL--LKDVGLRIAKMCGQLPLSIVLVAGILSEMEKEVECWEQVANNLGTHIHNDSRAIVNQ---SYHVLPCH--LKSCFLYFGAFLEDEVIDISRLIRLWISESFIKSSEGRRLEDIAEGYLENLIGRNLVMVTQRADSDGKVKACRLHDVLLDFCK 867          
BLAST of CK933949 vs. ExPASy Swiss-Prot
Match: DRL8_ARATH (Putative disease resistance protein At1g58400 OS=Arabidopsis thaliana GN=At1g58400 PE=2 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 9.196e-18
Identity = 78/272 (28.68%), Postives = 126/272 (46.32%), Query Frame = 1
Query:   22 ESKEASGLSEFQSLMSHIHRSIGGKKIFLVLDDVW-DGDSNKWDPFFFCLKNGLHGSKILVTTRNESIARMMGTTESDTISIEQLAEEECWLFFKQLAF---FGRCFEDCERLEPIGRKIARKCKGLPLAAKVIGNLLRSKITVKEWQRILDSEMWKLEEIGQ---------GLLAPLLLSYNDLPSNSMVKRCFSYCAVFPKDYSMDKEELISLWMAQGYFNA--XXXXXXXXXXXXYFNILATRSFFQEIEKDEDDDDFMRCKMHDIVHD 792
            E+K+     E   L   + + +   K  +V DD+W + D    +P F   K    G K+L+T+R E+IA M G         E L   E W+ F+++A        F+  + +E +G+++ + C GLPLA KV+G LL +K T  +W+R+  SE      +G+          +   L LS+ +LP  S +K CF Y A FP+D+++  E+L   W A+G                  Y   L  R+     E+D     F  C +HD++ +
Sbjct:  243 ETKDEILQMEEAELHDELFQLLETSKSLIVFDDIWKEEDWGLINPIFPPKK----GWKVLITSRTETIA-MHGNRRYVNFKPECLTILESWILFQRIAMPRVDESEFKVDKEMEMMGKQMIKYCGGLPLAVKVLGGLLAAKYTFHDWKRL--SENIGCHIVGRTDFSDGNNSSVYHVLSLSFEELP--SYLKHCFLYLAHFPEDHNIKVEKLSYCWAAEGILEPRHYHGQTIRDVGESYIEELVRRNMV-IAERDVTTLRFEACHLHDMMRE 504          
BLAST of CK933949 vs. ExPASy Swiss-Prot
Match: R1A6_SOLDE (Putative late blight resistance protein homolog R1A-6 OS=Solanum demissum GN=R1A-6 PE=3 SV=2)

HSP 1 Score: 89.7373 bits (221), Expect = 2.049e-17
Identity = 61/265 (23.02%), Postives = 124/265 (46.79%), Query Frame = 1
Query:   10 EGLGESKEASGLSEFQSLMSHIHRSIGGKKIFLVLDDVWDGDSNKWDPFFFCLKNGLHGSKILVTTRNESIARMMGTTESDTISIEQLAEEECWLFFKQLAFFGRCFEDCERLEPIGRKIARKCKGLPLAAKVIGNLLRS-KITVKEWQRILDSEMWKLEEIGQGLLAPLLLSYNDLPSNSMVKRCFSYCAVFPKDYSMDKEELISLWMAQGYFNAXXXXXXXXXXXXYFNILATRSFFQEIEKDEDDDDFMRCKMHDIVHDFAQ 801
            + +GE  E   L +   L   + +++  ++  +++DDVWD  +  WD    C  +  + S+I++TTR+  +A+   +  SD + +    E E W   ++  F  +       L+ IG +IA+ C  LPL+  ++  +L   +  V+ W+++ ++    +    + ++     SY+ LP +  +K CF Y   F +D  +D   LI LW+++ +  +            Y   L  R+     ++   D     C++HD++ DF +
Sbjct:  601 DAIGEESERRELPD-NELADMLRKTLLPRRYLILVDDVWDNSA--WDDLRGCFPDVNNRSRIILTTRHHEVAKY-ASVRSDPLHLRMFDEVESWKLLEKKVFGEQSCPPL--LKNIGLRIAKMCGQLPLSIVLVAGILSEMEKDVECWEQVANNLGSHIHNDSRAIVDQ---SYHVLPCH--LKSCFLYFGAFLEDRVIDISRLIRLWISEAFIKSSEGRSLEDIAEGYLENLIGRNLVMVTQRAISDGKVKACRLHDVLLDFCK 854          
BLAST of CK933949 vs. ExPASy Swiss-Prot
Match: R1A10_SOLDE (Putative late blight resistance protein homolog R1A-10 OS=Solanum demissum GN=R1A-10 PE=3 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 2.049e-17
Identity = 61/265 (23.02%), Postives = 124/265 (46.79%), Query Frame = 1
Query:   10 EGLGESKEASGLSEFQSLMSHIHRSIGGKKIFLVLDDVWDGDSNKWDPFFFCLKNGLHGSKILVTTRNESIARMMGTTESDTISIEQLAEEECWLFFKQLAFFGRCFEDCERLEPIGRKIARKCKGLPLAAKVIGNLLRS-KITVKEWQRILDSEMWKLEEIGQGLLAPLLLSYNDLPSNSMVKRCFSYCAVFPKDYSMDKEELISLWMAQGYFNAXXXXXXXXXXXXYFNILATRSFFQEIEKDEDDDDFMRCKMHDIVHDFAQ 801
            + +GE  E   L +   L   + +++  ++  +++DDVWD  +  WD    C  +  + S+I++TTR+  +A+   +  SD + +    E E W   ++  F  +       L+ IG +IA+ C  LPL+  ++  +L   +  V+ W+++ ++    +    + ++     SY+ LP +  +K CF Y   F +D  +D   LI LW+++ +  +            Y   L  R+     ++   D     C++HD++ DF +
Sbjct:  601 DAIGEESERRELPD-NELADMLRKTLLPRRYLILVDDVWDNSA--WDDLRGCFPDVNNRSRIILTTRHHEVAKY-ASVRSDPLHLRMFDEVESWKLLEKKVFGEQSCPPL--LKNIGLRIAKMCGQLPLSIVLVAGILSEMEKDVECWEQVANNLGSHIHNDSRAIVDQ---SYHVLPCH--LKSCFLYFGAFLEDRVIDISRLIRLWISEAFIKSSEGRSLEDIAEGYLENLIGRNLVMVTQRAISDGKVKACRLHDVLLDFCK 854          
BLAST of CK933949 vs. ExPASy Swiss-Prot
Match: RFL1_ARATH (Disease resistance protein RFL1 OS=Arabidopsis thaliana GN=RFL1 PE=2 SV=2)

HSP 1 Score: 88.9669 bits (219), Expect = 3.495e-17
Identity = 69/250 (27.60%), Postives = 112/250 (44.80%), Query Frame = 1
Query:   73 IHRSIGGKKIFLVLDDVWDGDSNKWDPFFFCLKNGLHGSKILVTTRNESIARMMGTTESDTISIEQLAEEECWLFFKQLAFFGRCFEDCERLEPIGRKIARKCKGLPLAAKVIGNLLRSKITVKEWQRILD--SEMWKLEEIGQGLLAPLLLSYNDLPSNSMVKRCFSYCAVFPKDYSMDKEELISLWMAQGYFNAXXXXXXXXXXXXYFNILAT---RSFFQEIEKDEDDDDFMRCKMHDIVHDFAQFV 807
            IH  +  KK  L+LDD+W+    K     +   +G +G K+  TT ++ +   MG    + + I  L     W   K+           + +  + RK++ KC GLPLA  VIG  +  K T++EW+   +  +       +   +L  L  SY+ L      K CF YC++FP+D+ + KE LI  W+ +G+                ++IL T    S   E  KD+D        MHD+V + A ++
Sbjct:  251 IHNVLRRKKFVLLLDDIWEKVELKVIGVPY--PSGENGCKVAFTTHSKEVCGRMGV--DNPMEISCLDTGNAWDLLKKKVGENTLGSHPD-IPQLARKVSEKCCGLPLALNVIGETMSFKRTIQEWRHATEVLTSATDFSGMEDEILPILKYSYDSLNGED-AKSCFLYCSLFPEDFEIRKEMLIEYWICEGFIKEKQGREKAFNQG--YDILGTLVRSSLLLEGAKDKD-----VVSMHDMVREMALWI 487          
BLAST of CK933949 vs. ExPASy Swiss-Prot
Match: RPP8_ARATH (Disease resistance protein RPP8 OS=Arabidopsis thaliana GN=RPP8 PE=1 SV=2)

HSP 1 Score: 88.5817 bits (218), Expect = 4.564e-17
Identity = 72/260 (27.69%), Postives = 115/260 (44.23%), Query Frame = 1
Query:   58 SLMSHIHRSIGGKKIFLVLDDVWDGDSNKWDPFFFCLKNGLHGSKILVTTRNESIARMMGTTESDTISIEQLAEEECWLFFKQLAFFGRCFEDC---ERLEPIGRKIARKCKGLPLAAKVIGNLLRSKITVKEWQRILDS-------EMWKLEEIGQGLLAPLLLSYNDLPSNSMVKRCFSYCAVFPKDYSMDKEELISLWMAQGYFNAXXXXXXXXXXXXYFNILATRSFFQEIEKDEDDDDFMR-----CKMHDIVHD 792
            +L   + + +   +  +VLDDVW  +   WD           G K+L+T+RNE +      T   T     L  EE W   +++ F  R   +    E +E +G+++   C GLPLA K +G LL +K TV EW+R+ D+         W  +     +   L LSY DLP++  +K CF   A FP+D  +    L   W A+G ++             Y   L  R+          DD+++      C+MHD++ +
Sbjct:  254 ALQRKLFQLLEAGRYLVVLDDVWKKED--WDVIKAVFPRK-RGWKMLLTSRNEGVGIHADPT-CLTFRASILNPEESWKLCERIVFPRRDETEVRLDEEMEAMGKEMVTHCGGLPLAVKALGGLLANKHTVPEWKRVFDNIGSQIVGGSWLDDNSLNSVYRILSLSYEDLPTH--LKHCFLNLAHFPEDSEISTYSLFYYWAAEGIYDG---STIEDSGEYYLEELVRRNLVIA------DDNYLSWQSKYCQMHDMMRE 498          
BLAST of CK933949 vs. ExPASy Swiss-Prot
Match: R1B19_SOLDE (Putative late blight resistance protein homolog R1B-19 OS=Solanum demissum GN=R1B-19 PE=5 SV=2)

HSP 1 Score: 87.8113 bits (216), Expect = 7.785e-17
Identity = 58/268 (21.64%), Postives = 127/268 (47.39%), Query Frame = 1
Query:    4 IIEGLGESKEASGLSEFQSLMSHIHRSIGGKKIFLVLDDVWDGDSNKWDPFFFCLKNGLHGSKILVTTRNESIARMMGTTESDTISIEQLAEEECWLFFKQLAFFGRCFEDCERL-EPIGRKIARKCKGLPLAAKVIGNL-LRSKITVKEWQRILDSEMWKLEEIGQGLLAPLLLSYNDLPSNSMVKRCFSYCAVFPKDYSMDKEELISLWMAQGYFNAXXXXXXXXXXXXYFNILATRSFFQEIEKDEDDDDFMRCKMHDIVHDFAQ 801
            + + +GE  E   L +   L   + +++  ++  +++DDVW+  ++ WD    C  +  + S+I++TTR+  +A+   +   D + +    E E W F ++  F     E C  L   +G++IA+ C  LP +  ++  +    +  V+ W+++ ++   ++    + ++     SY+ LP +  +K CF Y A F +D  +    L+ LW+++ +  +            Y   L  R+     ++ + D     C++HD++ DF +
Sbjct:  615 LCDTIGEESERRELPD-NELADMLRKTLLPRRYLILVDDVWE--NSVWDDLRGCFPDTNNRSRIILTTRHHEVAKY-ASVHIDPLHLRMFDENESWKFLEKNVFGE---ESCSPLLRDVGQRIAKMCGQLPFSIVLVAGIPSEMEKEVECWEQVANNLGTRIHNDSRAIVDQ---SYHVLPCH--LKSCFLYFAAFLEDVVIYISRLLRLWISEAFIKSSEGRSLEDIAEGYLENLIGRNLVMVTQRADSDGKVKTCRLHDVLLDFCK 870          
BLAST of CK933949 vs. ExPASy Swiss-Prot
Match: R13L2_ARATH (Putative disease resistance RPP13-like protein 2 OS=Arabidopsis thaliana GN=RPP13L2 PE=2 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 1.017e-16
Identity = 74/266 (27.82%), Postives = 124/266 (46.62%), Query Frame = 1
Query:    4 IIEGLGESKEASGLSEF--QSLMSHIHRSIGGKKIFLVLDDVWDGDSNKWDPFFFCLKNGLHGSKILVTTRNESIARMMGTTESDTISIEQLAEEECWLFFKQLAFFGRCFEDCERLEPIGRKIARKCKGLPLAAKVIGNLLRSKITVKEWQRILDSEMWKLEEIGQGLLAPLLLSYNDLPSNSMVKRCFSYCAVFPKDYSMDKEELISLWMAQGYFNAXXXXXXXXXXXXYFNILATRSFFQEIEKDEDDDDFMRCKMHDIVHDF 795
            II  L E+ E   L +   Q L  ++H  +  K+  +V+DD+W+ ++   +     L     GS++++TT    +A         T +I  L  +E W  F++ AF      D E L+ IG+++ +KC GLP    V+  L+  K    EW  +  S   K + I    L  L  S+ D+     +K CF Y +VFP+DY +D E+LI L +A+G+               Y   L   S  + +++ +     M  ++HD+V +F
Sbjct:  235 IISSLEETSEGE-LEKMAQQELEVYLHDILQEKRYLVVVDDIWESEA--LESLKRALPCSYQGSRVIITTSIRVVAEGRDKRVY-THNIRFLTFKESWNLFEKKAFRYILKVDQE-LQKIGKEMVQKCGGLPRTTVVLAGLMSRK-KPNEWNDVWSSLRVKDDNIHVSSLFDL--SFKDMGHE--LKLCFLYLSVFPEDYEVDVEKLIQLLVAEGFIQEDEEMTMEDVARYYIEDLVYISLVEVVKRKK--GKLMSFRIHDLVREF 488          
BLAST of CK933949 vs. ExPASy Swiss-Prot
Match: R1B12_SOLDE (Putative late blight resistance protein homolog R1B-12 OS=Solanum demissum GN=R1B-12 PE=3 SV=2)

HSP 1 Score: 87.0409 bits (214), Expect = 1.328e-16
Identity = 59/268 (22.01%), Postives = 125/268 (46.64%), Query Frame = 1
Query:    4 IIEGLGESKEASGLSEFQSLMSHIHRSIGGKKIFLVLDDVWDGDSNKWDPFFFCLKNGLHGSKILVTTRNESIARMMGTTESDTISIEQLAEEECWLFFKQLAFFGRCFEDCERL-EPIGRKIARKCKGLPLAAKVIGNLLRS-KITVKEWQRILDSEMWKLEEIGQGLLAPLLLSYNDLPSNSMVKRCFSYCAVFPKDYSMDKEELISLWMAQGYFNAXXXXXXXXXXXXYFNILATRSFFQEIEKDEDDDDFMRCKMHDIVHDFAQ 801
            + + +GE      L +   L     +++  ++  +++DDVW+  +  WD    C  +  + S+I++TTR+  +A+   +  SD + +    E+E W   ++  F     E C  L + +G +IA+ C  LPL+  ++  +L   +  V+ W+++ ++    +    + ++     SY+ LP +  +K CF Y   F +D  ++   LI LW+++ +  +            Y   L  R+     ++   D     C++HD++ DF +
Sbjct:  640 LCDAVGEDSARRELPD-NELADMFRKTLLPRRYLILVDDVWENSA--WDDLRGCFPDVNNRSRIILTTRHHEVAKY-ASVHSDPLHLRMFGEDESWKLLEKKVFGE---ERCSPLLKNVGLRIAKMCGRLPLSIVLVAGILSEMEKEVECWEQVANNLGSHIHNDSRAIVDQ---SYHVLPFH--LKSCFLYFGAFLEDRVINVSRLIRLWISESFIKSCEGRRLEDIAEGYLENLIGRNLVMVTQRANSDGKVKACRLHDVLLDFCK 895          
BLAST of CK933949 vs. ExPASy Swiss-Prot
Match: RP8HA_ARATH (Disease resistance protein RPH8A OS=Arabidopsis thaliana GN=RPH8A PE=3 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 2.265e-16
Identity = 60/195 (30.77%), Postives = 98/195 (50.26%), Query Frame = 1
Query:   97 KIFLVLDDVWDGDSNKWDPFFFCLKNGLHGSKILVTTRNESIARMMGTTESDTISIEQLAEEECWLFFKQLAFFGRCFEDC---ERLEPIGRKIARKCKGLPLAAKVIGNLLRSKITVKEWQRILDSEMWKL-------EEIGQGLLAPLLLSYNDLPSNSMVKRCFSYCAVFPKDYSMDKEELISLWMAQGYFN 651
            +  +VLDDVW  +   WD           G K+L+T+RNE +      T   T     L  EE W   +++ F  R   +    E +E +G+++   C GLPLA K +G LL +K TV EW+R+ D+   ++       +     +   L LSY DLP++  +K CF + A +P+D  +  ++L + W A+G ++
Sbjct:  267 RYLVVLDDVWKKED--WDRIKAVFPRK-RGWKMLLTSRNEGVGIHADPT-CLTFRASILNPEESWKLCERIVFPRRDETEVRLDEEMEAMGKEMVTHCGGLPLAVKALGGLLANKHTVPEWKRVSDNIGSQIVGGSCLDDNSLNSVYRILSLSYEDLPTH--LKHCFLHLAHYPEDSKIYTQDLFNYWAAEGIYD 455          
The following BLAST results are available for this feature:
BLAST of CK933949 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 62
Match NameE-valueIdentityDescription
R1B16_SOLDE7.041e-1821.72Putative late blight resistance protein homolog R1... [more]
DRL8_ARATH9.196e-1828.68Putative disease resistance protein At1g58400 OS=A... [more]
R1A6_SOLDE2.049e-1723.02Putative late blight resistance protein homolog R1... [more]
R1A10_SOLDE2.049e-1723.02Putative late blight resistance protein homolog R1... [more]
RFL1_ARATH3.495e-1727.60Disease resistance protein RFL1 OS=Arabidopsis tha... [more]
RPP8_ARATH4.564e-1727.69Disease resistance protein RPP8 OS=Arabidopsis tha... [more]
R1B19_SOLDE7.785e-1721.64Putative late blight resistance protein homolog R1... [more]
R13L2_ARATH1.017e-1627.82Putative disease resistance RPP13-like protein 2 O... [more]
R1B12_SOLDE1.328e-1622.01Putative late blight resistance protein homolog R1... [more]
RP8HA_ARATH2.265e-1630.77Disease resistance protein RPH8A OS=Arabidopsis th... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004543_C02 Developing fruit peel at 38 DAFB Citrus sinensis cDNA clone P38DAB10003_IIF_C02 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK933949 ID=CK933949; Name=CK933949; organism=Citrus sinensis; type=EST; length=814bp
GGGATCATTGAAGGTCTAGGCGAGTCAAAAGAAGCTTCTGGTTTAAGCGA
ATTCCAATCTCTTATGAGCCATATCCATAGATCAATTGGAGGAAAAAAAA
TTTTTCTTGTCTTAGATGATGTATGGGATGGGGATTCCAATAAATGGGAT
CCATTCTTCTTTTGTCTAAAGAATGGTCTCCACGGAAGTAAAATTTTGGT
AACCACACGTAATGAGTCAATTGCACGTATGATGGGAACAACAGAGTCAG
ATACTATCTCCATTGAACAACTGGCTGAAGAGGAATGCTGGTTGTTTTTC
AAGCAGTTAGCATTTTTCGGTCGCTGTTTCGAGGATTGTGAAAGATTAGA
ACCAATCGGGCGAAAAATTGCACGCAAGTGCAAAGGCCTGCCTCTTGCTG
CAAAGGTAATAGGGAATCTCTTGCGCTCTAAAATTACAGTAAAAGAGTGG
CAAAGAATTTTAGATAGTGAAATGTGGAAATTAGAAGAGATTGGGCAAGG
TCTTTTGGCTCCTTTGTTGTTGAGTTATAACGATTTGCCCTCCAATTCTA
TGGTAAAACGGTGCTTCTCATATTGTGCTGTCTTTCCAAAAGACTACAGT
ATGGATAAAGAAGAATTGATTAGTCTGTGGATGGCTCAAGGTTACTTTAA
CGCAGAAGAAGACGAAGAAATGGAGATGATTGGAGAAGAGTATTTCAACA
TCTTGGCAACACGCTCTTTCTTTCAAGAGATTGAAAAAGATGAGGATGAT
GATGATTTTATGAGGTGTAAGATGCATGACATAGTACATGATTTTGCCCA
ATTTGTAAGTAGAA
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