CK933949

Overview
NameCK933949
Unique NameCK933949
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length814
Libraries
Library NameType
Developing fruit peel at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
CK933949_ssr745 microsatellite CK933949_ssr745:745..756. BLAST: Citrus ESTs to Prunus persica proteins V1
Homology
BLAST of CK933949 vs. ExPASy Swiss-Prot
Match: RP8L4_ARATH (Probable disease resistance RPP8-like protein 4 OS=Arabidopsis thaliana GN=RPP8L4 PE=2 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 2.958e-16
Identity = 64/197 (32.49%), Postives = 98/197 (49.75%), Query Frame = 1
Query:   97 KIFLVLDDVWDGDSNKWDPFFFCLKNGLHGSKILVTTRNESIARMMGTTESDTISIEQLAEEECWLFFKQLAFFGRCFEDC---ERLEPIGRKIARKCKGLPLAAKVIGNLLRSKITVKEWQRILDSEMWKLEEIGQGLLAP---------LLLSYNDLPSNSMVKRCFSYCAVFPKDYSMDKEELISLWMAQGYFN 651
            +  LVLDDVW  +   WD           G K+L+T+RNE +      T   T     L  EE W   +++ F  R   +    E +E +G+++   C GLPLA K +G LL +K TV EW+R+ D+   ++  +G   L           L LSY DLP++  +K  F Y A FP+D  +  ++L + W A+G ++
Sbjct:  267 RYLLVLDDVWKKED--WDRIKAVFPRK-RGWKMLLTSRNEGVGIHADPT-CLTFRASILNPEESWKLCERIVFPRRDETEVRLDEEMEAMGKEMVTHCGGLPLAVKALGGLLANKHTVPEWKRVSDNIGSQI--VGGSCLDDNSLNSVNRILSLSYEDLPTH--LKHRFLYLAHFPEDSKIYTQDLFNYWAAEGIYD 455          
BLAST of CK933949 vs. ExPASy Swiss-Prot
Match: R1A_SOLDE (Late blight resistance protein R1-A OS=Solanum demissum GN=R1A PE=3 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 2.958e-16
Identity = 57/249 (22.89%), Postives = 119/249 (47.79%), Query Frame = 1
Query:   61 LMSHIHRSIGGKKIFLVLDDVWDGDSNKWDPFFFCLKNGLHGSKILVTTRNESIARMMGTTESDTISIEQLAEEECWLFFKQLAFFGRCFEDCERL-EPIGRKIARKCKGLPLAAKVIGNLLRS-KITVKEWQRILDSEMWKLEEIGQGLLAPLLLSYNDLPSNSMVKRCFSYCAVFPKDYSMDKEELISLWMAQGYFNAXXXXXXXXXXXXYFNILATRSFFQEIEKDEDDDDFMRCKMHDIVHDFAQ 801
            L   + +++  ++  +++DDVW+  ++ WD    C  +  + S+I++TTR+  +A+   +  SD + +    E E W   ++  F     E C  L + +G +IA+ C  LPL+  ++  +L   +  V+ W+++ ++    +    + ++     SY+ LP +  +K CF Y   F +D  +D   LI LW+++ +  +            Y   L  R+     ++   D     C++HD++ DF +
Sbjct:  635 LADMLRKTLLPRRYLILVDDVWE--NSVWDDLRGCFPDVNNRSRIILTTRHHEVAKY-ASVHSDPLHLRMFDEVESWKLLEKKVFGE---ESCSPLLKNVGLRIAKMCGQLPLSIVLVAGILSEMEKEVECWEQVANNLGSYIHNDSRAIVDK---SYHVLPCH--LKSCFLYFGAFLEDRVIDISRLIRLWISEAFIKSSEGRRLEDIAEGYLENLIGRNLVMVTQRSISDGKAKECRLHDVLLDFCK 872          
BLAST of CK933949 vs. ExPASy Swiss-Prot
Match: RP8L1_ARATH (Putative disease resistance protein RPP8-like protein 1 OS=Arabidopsis thaliana GN=RPP8L1 PE=2 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 3.864e-16
Identity = 70/240 (29.17%), Postives = 111/240 (46.25%), Query Frame = 1
Query:   97 KIFLVLDDVWDGDSNKWDPFFFCLKNGLHGSKILVTTRNESIARMMGTTESDTISIEQLAEEECWLFFKQLAFFGRCFEDC-ERLEPIGRKIARKCKGLPLAAKVIGNLLRSKITVKEWQRILD------SEMWKLEEIGQGLLAPLLLSYNDLPSNSMVKRCFSYCAVFPKDYSMDKEELISLWMAQGYF-NAXXXXXXXXXXXXYFNILATRSFFQEIEKDEDDDDFMRCKMHDIVHD 792
            +  +VLDDVW  +   WD           G K+L+T+RNE +  +    +S       L  EE W   +++ F  R        +E +G+++   C GLPLA KV+G LL +K TV EW+R+ D      +    L++    +   L LSY +LP    +K CF Y A FP+ Y +  + L +   A+G   ++            Y   LA R+    I+K+        C+MHD++ +
Sbjct:  242 RYLVVLDDVWKEED--WDRIKAVFPRK-RGWKMLLTSRNEGVG-IHADPKSFGFKTRILTPEESWKLCEKIVFHRRDETGTLSDMEAMGKEMVTCCGGLPLAVKVLGGLLATKHTVPEWKRVYDNIGPHLAGRSSLDDNLNSIYRVLSLSYENLP--MCLKHCFLYLAHFPEYYEIHVKRLFNYLAAEGIITSSDDGTTIQDKGEDYLEELARRNMI-TIDKNYMFLRKKHCQMHDMMRE 474          
BLAST of CK933949 vs. ExPASy Swiss-Prot
Match: DRL13_ARATH (Putative disease resistance protein At1g59780 OS=Arabidopsis thaliana GN=At1g59780 PE=2 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 8.607e-16
Identity = 68/277 (24.55%), Postives = 124/277 (44.77%), Query Frame = 1
Query:    4 IIEGLGESKEASGLSEFQSLMSHIHRSIGGKKIFLVLDDVWDGDSNKWDPFFFCLKNGLHGSKILVTTRNESIARMMGTTESDTISIEQLAEEECWLFFKQLAFFGRC----FEDCERLEPIGRKIARKCKGLPLAAKVIGNLLRSKITVKEWQRILDSEMWKL--------EEIGQGLLAPLLLSYNDLPSNSMVKRCFSYCAVFPKDYSMDKEELISLWMAQG--YFNAXXXXXXXXXXXXYFNILATRSFFQEIEKDEDDDDFMRCKMHDIVHD 792
            I+  L    + S L E   +   + + +  KK  +V DD+W  +   W            G K+L+T+RN++I          T   E L  +ECW   +++AF  +     +   + +  + +++ + CK LPLA K++G LL +K T+++W+ I ++ +  +        E     +   L LS+  LP    +K C  Y A +P+D+ ++ E L  +W A+G  Y               Y   L  R+     E+D     F +C++HD++ +
Sbjct:  231 ILGNLSPKYKDSDLPE-DDIQKKLFQLLETKKALIVFDDLWKRED--WYRIAPMFPERKAGWKVLLTSRNDAIH-----PHCVTFKPELLTHDECWKLLQRIAFSKQKTITGYIIDKEMVKMAKEMTKHCKRLPLAVKLLGGLLDAKHTLRQWKLISENIISHIVVGGTSSNENDSSSVNHVLSLSFEGLP--GYLKHCLLYLASYPEDHEIEIERLSYVWAAEGITYPGNYEGATIRDVADLYIEELVKRNMVIS-ERDALTSRFEKCQLHDLMRE 496          
BLAST of CK933949 vs. ExPASy Swiss-Prot
Match: R1B8_SOLDE (Putative late blight resistance protein homolog R1B-8 OS=Solanum demissum GN=R1B-8 PE=5 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 1.124e-15
Identity = 57/267 (21.35%), Postives = 124/267 (46.44%), Query Frame = 1
Query:    4 IIEGLGESKEASGLSEFQSLMSHIHRSIGGKKIFLVLDDVWDGDSNKWDPFFFCLKNGLHGSKILVTTRNESIARMMGTTESDTISIEQLAEEECWLFFKQLAFFGRCFEDCERLEPIGRKIARKCKGLPLAAKVIGNLLRS-KITVKEWQRILDSEMWKLEEIGQGLLAPLLLSYNDLPSNSMVKRCFSYCAVFPKDYSMDKEELISLWMAQGYFNAXXXXXXXXXXXXYFNILATRSFFQEIEKDEDDDDFMRCKMHDIVHDFAQ 801
            I + +GE+ +         L   + +++  ++  +++DDVW+  ++ WD       +  + S+I++ TR+  +A+   +   D + +  L E+E W   ++  F G        L+ +G +IA+ C  LPL+  ++  +L   +  V+ W+++ ++    +    + ++     SY+ LP +  +K CF Y   F +D  +D   LI LW+++ +  +            Y   L  R+     ++   D     C++HD++ DF +
Sbjct:  531 IRDAIGENSDQHRELCANELADKLRKTLLRRRYLILVDDVWE--NSVWDDLRGWFPDANNRSRIILMTRHHEVAKY-ASVHGDPLHLRMLDEDESWKLLEKKVF-GEQSCSSPLLKNVGLRIAKMCGQLPLSIVLVAGILSEMEKEVECWEQVANNLGSHIHNDSRAIVDQ---SYHVLPCH--LKSCFLYFGAFLEDRVIDISRLIGLWISESFIKSCEGRRLEYIAEGYLENLIGRNLVMVTQRAISDGKVKACRLHDVLLDFCK 788          
BLAST of CK933949 vs. ExPASy Swiss-Prot
Match: RPS2_ARATH (Disease resistance protein RPS2 OS=Arabidopsis thaliana GN=RPS2 PE=1 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 1.918e-15
Identity = 66/256 (25.78%), Postives = 119/256 (46.48%), Query Frame = 1
Query:   73 IHRSIGGKKIFLVLDDVWDGDSNKWDPFFFCLKNGL------HGSKILVTTRNESIARMMGTTESDTISIEQLAEEECWLFFKQLAFFGRCFEDCERLEPIGRKIARKCKGLPLAAKVIGNLLRSKITVKEWQRILDSEM---WKLEEIGQGLLAPLL-LSYNDLPSNSMVKRCFSYCAVFPKDYSMDKEELISLWMAQGYFNAXXXXXXXXXXXXYFNILATRSFFQEIEKDEDDDDFMRCKMHDIVHDFAQFVS 810
            I+R++  K+  L+LDDVW+    +        K G+      +  K++ TTR+ ++   MG      + +E L ++  W  F    +     E    +  +   I  KC GLPLA   +G  +  + T +EW  I  SE+   +  E  G   +  LL  SY++L S+ +++ CF YCA+FP+++S++ E+L+  W+ +G+  +                L            E  D+  + KMH++V  FA +++
Sbjct:  248 IYRALRQKRFLLLLDDVWEEIDLE--------KTGVPRPDRENKCKVMFTTRSIALCNNMGAEYK--LRVEFLEKKHAWELFCSKVWRKDLLESSS-IRRLAEIIVSKCGGLPLALITLGGAMAHRETEEEW--IHASEVLTRFPAEMKGMNYVFALLKFSYDNLESD-LLRSCFLYCALFPEEHSIEIEQLVEYWVGEGFLTSSHGVNTIYKGYFLIGDLKAACLL------ETGDEKTQVKMHNVVRSFALWMA 483          
BLAST of CK933949 vs. ExPASy Swiss-Prot
Match: DRL38_ARATH (Probable disease resistance protein At5g47260 OS=Arabidopsis thaliana GN=At5g47260 PE=2 SV=2)

HSP 1 Score: 81.6481 bits (200), Expect = 5.579e-15
Identity = 50/159 (31.45%), Postives = 86/159 (54.09%), Query Frame = 1
Query:  181 HGSKILVTTRNESIARMMGTTESDTISIEQLAEEECWLFFKQLAFFG--RCFEDCERLEPIGRKIARKCKGLPLAAKVIGNLLRSKITVKEWQ---RILDSEMWKLEEIGQGLLAPLLLSYNDLPSNSMVKRCFSYCAVFPKDYSMDKEELISLWMAQG 642
            +G KI+ TT++          ++  + I  L+ EE W  F++       R  +D  +L    R +A  C+GLPLA  +IG  +  K TV+EW+    +L S   +  ++  G L P+L S  D  S+ +++ CF YCA+FP++  + KE+L++ W+ +G
Sbjct:  272 NGCKIVFTTQSLEACDESKWVDAK-VEITCLSPEEAWDLFQETVGENTLRSHQDIPKL---ARVVASTCRGLPLALNLIGEAMSGKRTVREWRYTIHVLASSTAEFPDMEDGTL-PILKSIYDNMSDEIIRLCFLYCALFPENLDIGKEDLVNYWICEG 425          
BLAST of CK933949 vs. ExPASy Swiss-Prot
Match: DRL19_ARATH (Putative disease resistance protein At1g63350 OS=Arabidopsis thaliana GN=At1g63350 PE=2 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 2.769e-14
Identity = 56/194 (28.87%), Postives = 97/194 (50.00%), Query Frame = 1
Query:   70 HIHRSIGGKKIFLVLDDVWDG-DSNKWDPFFFCLKNGLHGSKILVTTRNESIARMMGTTESDTISIEQLAEEECWLFFKQLAFFGRCFEDCERLEPIGRKIARKCKGLPLAAKVIGNLLRSKITVKEWQR---ILDSEMWKLEEIGQGLLAPLLLSYNDLPSNSMVKRCFSYCAVFPKDYSMDKEELISLWMAQ 639
            +++  +   +  L LDD+W+  +  +    F  +KN     K++ TTR+  +   MG  +   + ++ LA+ + +  F++         D E +  + R +A+KC GLPLA  V+   +  K TV+EW+    +L+S   K   +   +L  L  SY+ L     VK C  YCA+FP+D  + KE LI  W+ +
Sbjct:  246 YLYNFLRKMRFVLFLDDIWEKVNLVEIGVPFPTIKNKC---KVVFTTRSLDVCTSMGVEKP--MEVQCLADNDAYDLFQKKVGQITLGSDPE-IRELSRVVAKKCCGLPLALNVVSETMSCKRTVQEWRHAIYVLNSYAAKFSGMDDKILPLLKYSYDSLKGED-VKMCLLYCALFPEDAKIRKENLIEYWICE 432          
BLAST of CK933949 vs. ExPASy Swiss-Prot
Match: R1A4_SOLDE (Putative late blight resistance protein homolog R1A-4 OS=Solanum demissum GN=R1A-4 PE=5 SV=2)

HSP 1 Score: 77.7962 bits (190), Expect = 8.056e-14
Identity = 51/248 (20.56%), Postives = 115/248 (46.37%), Query Frame = 1
Query:   61 LMSHIHRSIGGKKIFLVLDDVWDGDSNKWDPFFFCLKNGLHGSKILVTTRNESIARMMGTTESDTISIEQLAEEECWLFFKQLAFFGRCFEDCERLEPIGRKIARKCKGLPLAAKVIGNLLRS-KITVKEWQRILDSEMWKLEEIGQGLLAPLLLSYNDLPSNSMVKRCFSYCAVFPKDYSMDKEELISLWMAQGYFNAXXXXXXXXXXXXYFNILATRSFFQEIEKDEDDDDFMRCKMHDIVHDFAQ 801
            L   + +++  ++  +++DDVW+  ++ WD    C  +  + S+I++TTR+  +A+   +  SD + +    E+E W   ++  F  +       L+ +G +IA+ C  LPL+  ++  +L   +  V+ W+++ +     +    + ++     SY+ LP +  +K CF Y   F     +    LI LW+++ +  +            Y   L  R+     ++   +     C++HD++ +F +
Sbjct:  623 LADMLRKTLLPRRYLILVDDVWE--NSVWDDLRGCFPDANNRSRIILTTRHHEVAKY-ASVHSDPLHLRMFDEDESWKLLEKKVFGEQSCSPL--LKKVGLRIAKMCGQLPLSIVLVAGILSEMEKEVECWEQVANDLGTHIRSNSRAIVDQ---SYHVLPCH--LKSCFLYFGAFLGVREIRISRLIRLWISESFIKSCEGRRLEDIAEGYLENLIGRNLVMVTQRANSNGKVKACRLHDVLLNFCK 860          
BLAST of CK933949 vs. ExPASy Swiss-Prot
Match: DRL14_ARATH (Probable disease resistance protein At1g62630 OS=Arabidopsis thaliana GN=At1g62630 PE=2 SV=2)

HSP 1 Score: 75.8702 bits (185), Expect = 3.061e-13
Identity = 56/197 (28.43%), Postives = 95/197 (48.22%), Query Frame = 1
Query:   70 HIHRSIGGKKIFLVLDDVWD----GDSNKWDPFFFCLKNGLHGSKILVTTRNESIARMMGTTESDTISIEQLAEEECWLFFKQLAFFGRCFEDCERLEPIGRKIARKCKGLPLAAKVIGNLLRSKITVKEWQ---RILDSEMWKLEEIGQGLLAPLLLSYNDLPSNSMVKRCFSYCAVFPKDYSMDKEELISLWMAQ 639
            H+   +  KK  L LDD+WD     +    DP          G K+  T+R+ ++   MG  + + + ++ L E   +  F++         D   +  + R +A+KC GLPLA  VIG  +  K T++EW+    +L+S   +   +   +L  L  SY++L     VK    YCA++P+D  + KE+LI  W+ +
Sbjct:  246 HLFNFLKNKKFVLFLDDLWDKVELANIGVPDP------RTQKGCKLAFTSRSLNVCTSMG--DEEPMEVQCLEENVAFDLFQKKVGQKTLGSD-PGIPQLARIVAKKCCGLPLALNVIGETMSCKRTIQEWRNAIHVLNSYAAEFIGMEDKILPLLKYSYDNL-KGEHVKSSLLYCALYPEDAKIRKEDLIEHWICE 432          
The following BLAST results are available for this feature:
BLAST of CK933949 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 62
Match NameE-valueIdentityDescription
RP8L4_ARATH2.958e-1632.49Probable disease resistance RPP8-like protein 4 OS... [more]
R1A_SOLDE2.958e-1622.89Late blight resistance protein R1-A OS=Solanum dem... [more]
RP8L1_ARATH3.864e-1629.17Putative disease resistance protein RPP8-like prot... [more]
DRL13_ARATH8.607e-1624.55Putative disease resistance protein At1g59780 OS=A... [more]
R1B8_SOLDE1.124e-1521.35Putative late blight resistance protein homolog R1... [more]
RPS2_ARATH1.918e-1525.78Disease resistance protein RPS2 OS=Arabidopsis tha... [more]
DRL38_ARATH5.579e-1531.45Probable disease resistance protein At5g47260 OS=A... [more]
DRL19_ARATH2.769e-1428.87Putative disease resistance protein At1g63350 OS=A... [more]
R1A4_SOLDE8.056e-1420.56Putative late blight resistance protein homolog R1... [more]
DRL14_ARATH3.061e-1328.43Probable disease resistance protein At1g62630 OS=A... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004543_C02 Developing fruit peel at 38 DAFB Citrus sinensis cDNA clone P38DAB10003_IIF_C02 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK933949 ID=CK933949; Name=CK933949; organism=Citrus sinensis; type=EST; length=814bp
GGGATCATTGAAGGTCTAGGCGAGTCAAAAGAAGCTTCTGGTTTAAGCGA
ATTCCAATCTCTTATGAGCCATATCCATAGATCAATTGGAGGAAAAAAAA
TTTTTCTTGTCTTAGATGATGTATGGGATGGGGATTCCAATAAATGGGAT
CCATTCTTCTTTTGTCTAAAGAATGGTCTCCACGGAAGTAAAATTTTGGT
AACCACACGTAATGAGTCAATTGCACGTATGATGGGAACAACAGAGTCAG
ATACTATCTCCATTGAACAACTGGCTGAAGAGGAATGCTGGTTGTTTTTC
AAGCAGTTAGCATTTTTCGGTCGCTGTTTCGAGGATTGTGAAAGATTAGA
ACCAATCGGGCGAAAAATTGCACGCAAGTGCAAAGGCCTGCCTCTTGCTG
CAAAGGTAATAGGGAATCTCTTGCGCTCTAAAATTACAGTAAAAGAGTGG
CAAAGAATTTTAGATAGTGAAATGTGGAAATTAGAAGAGATTGGGCAAGG
TCTTTTGGCTCCTTTGTTGTTGAGTTATAACGATTTGCCCTCCAATTCTA
TGGTAAAACGGTGCTTCTCATATTGTGCTGTCTTTCCAAAAGACTACAGT
ATGGATAAAGAAGAATTGATTAGTCTGTGGATGGCTCAAGGTTACTTTAA
CGCAGAAGAAGACGAAGAAATGGAGATGATTGGAGAAGAGTATTTCAACA
TCTTGGCAACACGCTCTTTCTTTCAAGAGATTGAAAAAGATGAGGATGAT
GATGATTTTATGAGGTGTAAGATGCATGACATAGTACATGATTTTGCCCA
ATTTGTAAGTAGAA
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