CK933951

Overview
NameCK933951
Unique NameCK933951
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length858
Libraries
Library NameType
Developing fruit peel at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig8852 contig Csv1_Contig8852:1..855. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of CK933951 vs. ExPASy Swiss-Prot
Match: AQP2_HORSE (Aquaporin-2 (Fragment) OS=Equus caballus GN=AQP2 PE=3 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 5.273e-11
Identity = 42/104 (40.38%), Postives = 58/104 (55.77%), Query Frame = 2 
Query:  218 SWSFYRAGIAEFMATFLFLYITVLTVMGVSKSNTKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLLLARKLSLTRAVFYMVMQCLGAVCGAGVV 529
            S +F RA +AEF+AT LF++  + + +     N   +   +  IA AFG  I  LV     +SG HINPAVT   L+   +S  RA FY+  Q LGAV GA ++
Sbjct:    1 SIAFSRAVLAEFLATLLFVFFGLGSAL-----NWPQAMPSVLQIAMAFGLAIGTLVQALGHVSGAHINPAVTVACLVGCHVSFLRAAFYVAAQLLGAVAGAALL 99
[Close]
BLAST of CK933951 vs. ExPASy Swiss-Prot
Match: AQP2_DUGDU (Aquaporin-2 (Fragment) OS=Dugong dugon GN=AQP2 PE=3 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 6.886e-11
Identity = 42/104 (40.38%), Postives = 57/104 (54.81%), Query Frame = 2 
Query:  218 SWSFYRAGIAEFMATFLFLYITVLTVMGVSKSNTKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLLLARKLSLTRAVFYMVMQCLGAVCGAGVV 529
            S +F RA  +EF+AT LF++  + + +     N   +   +  IA AFG  I  LV     ISG HINPAVT   L+   +S  RA FY+  Q LGAV GA ++
Sbjct:    1 SIAFSRAVFSEFLATLLFVFFGLGSAL-----NWPQALPSVLQIAMAFGLAIGTLVQALGHISGAHINPAVTVACLVGCHVSFLRATFYLAAQLLGAVAGAAIL 99
The following BLAST results are available for this feature:
BLAST of CK933951 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 192
Match NameE-valueIdentityDescription
AQP2_HORSE5.273e-1140.38Aquaporin-2 (Fragment) OS=Equus caballus GN=AQP2 P... [more]
AQP2_DUGDU6.886e-1140.38Aquaporin-2 (Fragment) OS=Dugong dugon GN=AQP2 PE=... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004543_C04 Developing fruit peel at 38 DAFB Citrus sinensis cDNA clone P38DAB10003_IIF_C04 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK933951 ID=CK933951; Name=CK933951; organism=Citrus sinensis; type=EST; length=858bp
GGGGACGCTACATACACAACACAAACACAGCATCTTCTTTGAGAGAATAA
GAGAGCGAGAGAGAGGTTCATCATCGTCAATGGAGGGCAAAGAAGAGGAT
GTTAAGCTAGGAGCTAACAAGTTCTCAGAGAGGCAACCCATTGGGACATC
AGCTCAATCAGACAAAGACTACAAGGAGCCACCACCAGCACCTTTGTTTG
AGCCTGGTGAGCTCAAGTCATGGTCTTTTTACAGAGCTGGTATTGCAGAG
TTCATGGCTACCTTCTTGTTCCTCTACATCACTGTCTTGACTGTCATGGG
TGTCTCTAAGTCTAACACCAAGTGCTCCACTGTCGGTATCCAAGGAATTG
CTTGGGCCTTTGGTGGCATGATCTTTGCGCTTGTTTACTGCACTGCTGGT
ATCTCAGGAGGACACATCAACCCAGCAGTGACCTTCGGTCTGCTGCTAGC
GAGGAAGCTTTCCCTGACAAGGGCTGTCTTCTACATGGTCATGCAGTGCC
TTGGTGCTGTCTGTGGTGCTGGTGTTGTCAAGGGATTCGAAGGTTCAAAG
AACTACGAGAGGTTGGGTGGTGGAGCCAATGTTGTTGCTCACGGCTACAC
CAAGGGTGATGGTCTTGGTGCTGAGATTATTGGAACCTTTGTTCTTGTTT
ACACTGTCTTCTCTGCCACTGATGCGAAGAGAAACGCCAGAGACTCTCAT
GTCCCTATTTTGGCCCCCCTCCCCATTGGATTTGCTGTTTTCTTGGTCCA
CCTGGCCACCATCCCCATCACAGGAACTGGCATCAACCCAGCTAGGAGTC
TTGGAGCTGCCATCATCTTCAACAAAGACCATGCCTGGGATGACCATTGG
ATCTTCTG
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