CK933951

Overview
NameCK933951
Unique NameCK933951
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length858
Libraries
Library NameType
Developing fruit peel at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig8852 contig Csv1_Contig8852:1..855. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CK933951 vs. ExPASy Swiss-Prot
Match: AQP1_PIG (Aquaporin-1 OS=Sus scrofa GN=AQP1 PE=2 SV=3)

HSP 1 Score: 153.68 bits (387), Expect = 1.246e-36
Identity = 92/220 (41.82%), Postives = 124/220 (56.36%), Query Frame = 2
Query:  209 ELKSWSFYRAGIAEFMATFLFLYITVLTVMG----VSKSNTKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLLLARKLSLTRAVFYMVMQCLGAVCGAGVVKGFEGSKNYERLGGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIFNKDHAWDDHWIF 856
            E K   F+RA +AEF+A  LF++I++ + +G    V  + T  +      ++ AFG  I  L      ISG H+NPAVT GLLL+ ++S+ RAV Y++ QC+GA+    ++ G   S     L  G N +A G   G GLG EIIGT  LV  V + TD +R          APL IGF+V L HL  I  TG GINPARS G+A+I    H + DHW+F
Sbjct:    4 EFKKKIFWRAVVAEFLAMTLFIFISIGSALGFQYPVRNNQTSGAAQDNVKVSLAFGLSIATLAQSVGHISGAHLNPAVTLGLLLSCQISVLRAVMYIIAQCVGAIVATAILSGITSSLPGNSL--GLNSLAPGVDSGQGLGIEIIGTLQLVLCVLATTDRRRRDLGGS----APLAIGFSVALGHLLAIDYTGCGINPARSFGSAVI---THNFQDHWVF 214          
BLAST of CK933951 vs. ExPASy Swiss-Prot
Match: AQP1_BOVIN (Aquaporin-1 OS=Bos taurus GN=AQP1 PE=1 SV=3)

HSP 1 Score: 152.525 bits (384), Expect = 2.776e-36
Identity = 92/220 (41.82%), Postives = 123/220 (55.91%), Query Frame = 2
Query:  209 ELKSWSFYRAGIAEFMATFLFLYITVLTVMGVS---KSNTKCSTVGIQ-GIAWAFGGMIFALVYCTAGISGGHINPAVTFGLLLARKLSLTRAVFYMVMQCLGAVCGAGVVKGFEGSKNYERLGGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIFNKDHAWDDHWIF 856
            E K   F+RA +AEF+A  LF++I++ + +G     KSN     V     ++ AFG  I  L      ISG H+NPAVT GLLL+ ++S+ RA+ Y++ QC+GA+    ++ G   S     L  G N +A G   G GLG EIIGT  LV  V + TD +R           PL IGF+V L HL  I  TG GINPARS G+++I    H + DHWIF
Sbjct:    4 EFKKKLFWRAVVAEFLAMILFIFISIGSALGFHYPIKSNQTTGAVQDNVKVSLAFGLSIATLAQSVGHISGAHLNPAVTLGLLLSCQISVLRAIMYIIAQCVGAIVATAILSGITSSLPDNSL--GLNALAPGVNSGQGLGIEIIGTLQLVLCVLATTDRRRRDLGGS----GPLAIGFSVALGHLLAIDYTGCGINPARSFGSSVI---THNFQDHWIF 214          
BLAST of CK933951 vs. ExPASy Swiss-Prot
Match: AQP1_SHEEP (Aquaporin-1 OS=Ovis aries GN=AQP1 PE=2 SV=3)

HSP 1 Score: 152.14 bits (383), Expect = 3.626e-36
Identity = 94/220 (42.73%), Postives = 126/220 (57.27%), Query Frame = 2
Query:  209 ELKSWSFYRAGIAEFMATFLFLYITVLTVMGVS---KSNTKCSTVGIQ-GIAWAFGGMIFALVYCTAGISGGHINPAVTFGLLLARKLSLTRAVFYMVMQCLGAVCGAGVVKGFEGSKNYERLGGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIFNKDHAWDDHWIF 856
            E K   F+RA +AEF+A  LF++I++ + +G     KSN     V     ++ AFG  I  L      ISG H+NPAVT GLLL+ ++S+ RA+ Y++ QC+GA+    ++ G   S     L  G N +A G   G GLG EIIGT  LV  V + TD +R  RD  +    PL IGF+V L HL  I  TG GINPARS G+++I    H + DHWIF
Sbjct:    4 EFKKKLFWRAVVAEFLAMILFIFISIGSALGFHYPIKSNQTTGAVQDNVKVSLAFGLSIATLAQSVGHISGAHLNPAVTLGLLLSCQISILRAIMYIIAQCVGAIVATVILSGITSSLPDNSL--GLNALAPGVNSGQGLGIEIIGTLQLVLCVLATTD-RRRRRD--LGDSGPLAIGFSVALGHLLAIDYTGCGINPARSFGSSVI---THNFQDHWIF 215          
BLAST of CK933951 vs. ExPASy Swiss-Prot
Match: AQP1_HUMAN (Aquaporin-1 OS=Homo sapiens GN=AQP1 PE=1 SV=3)

HSP 1 Score: 151.369 bits (381), Expect = 6.185e-36
Identity = 90/218 (41.28%), Postives = 123/218 (56.42%), Query Frame = 2
Query:  209 ELKSWSFYRAGIAEFMATFLFLYITVLTVMGVSK--SNTKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLLLARKLSLTRAVFYMVMQCLGAVCGAGVVKGFEGSKNYERLGGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIFNKDHAWDDHWIF 856
            E K   F+RA +AEF+AT LF++I++ + +G      N + +      ++ AFG  I  L      ISG H+NPAVT GLLL+ ++S+ RA+ Y++ QC+GA+    ++ G   S     L  G N +A G   G GLG EIIGT  LV  V + TD +R          APL IG +V L HL  I  TG GINPARS G+A+I    H + +HWIF
Sbjct:    4 EFKKKLFWRAVVAEFLATTLFVFISIGSALGFKYPVGNNQTAVQDNVKVSLAFGLSIATLAQSVGHISGAHLNPAVTLGLLLSCQISIFRALMYIIAQCVGAIVATAILSGITSSLTGNSL--GRNDLADGVNSGQGLGIEIIGTLQLVLCVLATTDRRRRDLGGS----APLAIGLSVALGHLLAIDYTGCGINPARSFGSAVI---THNFSNHWIF 212          
BLAST of CK933951 vs. ExPASy Swiss-Prot
Match: AQP1_CANFA (Aquaporin-1 OS=Canis familiaris GN=AQP1 PE=2 SV=3)

HSP 1 Score: 149.828 bits (377), Expect = 1.800e-35
Identity = 90/220 (40.91%), Postives = 121/220 (55.00%), Query Frame = 2
Query:  209 ELKSWSFYRAGIAEFMATFLFLYITVLTVMGVSKSNTKCSTVGIQG----IAWAFGGMIFALVYCTAGISGGHINPAVTFGLLLARKLSLTRAVFYMVMQCLGAVCGAGVVKGFEGSKNYERLGGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIFNKDHAWDDHWIF 856
            E K   F+RA +AEF+A  LF++I++ + +G +       T G       ++ AFG  I  L      ISG H+NPAVT GLLL+ ++S+ RAV Y++ QC+GA+    ++ G   S     L  G N +A G   G GLG EIIGT  LV  V + TD +R           PL IG +V L HL  I  TG GINPARS G+++I    H + DHWIF
Sbjct:    4 EFKKKLFWRAVVAEFLAMILFVFISIGSALGFNYPVRNNQTAGAAQDNVKVSLAFGLSIATLAQSVGHISGAHLNPAVTLGLLLSCQISILRAVMYIIAQCVGAIVATAILSGITSSLPDNSL--GRNELAPGVNSGQGLGIEIIGTLQLVLCVLATTDRRRRDLGGS----GPLAIGLSVALGHLLAIDYTGCGINPARSFGSSVI---THNFKDHWIF 214          
BLAST of CK933951 vs. ExPASy Swiss-Prot
Match: AQP1_MOUSE (Aquaporin-1 OS=Mus musculus GN=Aqp1 PE=1 SV=3)

HSP 1 Score: 149.443 bits (376), Expect = 2.350e-35
Identity = 89/218 (40.83%), Postives = 124/218 (56.88%), Query Frame = 2
Query:  209 ELKSWSFYRAGIAEFMATFLFLYITVLTVMGVSKSNTKCSTVGIQGI--AWAFGGMIFALVYCTAGISGGHINPAVTFGLLLARKLSLTRAVFYMVMQCLGAVCGAGVVKGFEGSKNYERLGGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIFNKDHAWDDHWIF 856
            E+K   F+RA +AEF+A  LF++I++ + +G +    +  T+    +  + AFG  I  L      ISG H+NPAVT GLLL+ ++S+ RAV Y++ QC+GA+    ++ G   S     L  G N +AHG   G GLG EIIGT  LV  V + TD +R          APL IG +V L HL  I  TG GINPARS G+A++      + +HWIF
Sbjct:    4 EIKKKLFWRAVVAEFLAMTLFVFISIGSALGFNYPLERNQTLVQDNVKVSLAFGLSIATLAQSVGHISGAHLNPAVTLGLLLSCQISILRAVMYIIAQCVGAIVATAILSGITSSLVDNSL--GRNDLAHGVNSGQGLGIEIIGTLQLVLCVLATTDRRRRDLGGS----APLAIGLSVALGHLLAIDYTGCGINPARSFGSAVLTRN---FSNHWIF 212          
BLAST of CK933951 vs. ExPASy Swiss-Prot
Match: AQP1_PONAB (Aquaporin-1 OS=Pongo abelii GN=AQP1 PE=2 SV=3)

HSP 1 Score: 148.288 bits (373), Expect = 5.236e-35
Identity = 89/218 (40.83%), Postives = 122/218 (55.96%), Query Frame = 2
Query:  209 ELKSWSFYRAGIAEFMATFLFLYITVLTVMGVSK--SNTKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLLLARKLSLTRAVFYMVMQCLGAVCGAGVVKGFEGSKNYERLGGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIFNKDHAWDDHWIF 856
            E K   F+RA +AEF+A  LF++I++ + +G      N + +      ++ AFG  I  L      ISG H+NPAVT GLLL+ ++S+ RA+ Y++ QC+GA+    ++ G   S     L  G N +A G   G GLG EIIGT  LV  V + TD +R          APL IG +V L HL  I  TG GINPARS G+A+I    H + +HWIF
Sbjct:    4 EFKKKLFWRAVVAEFLAMTLFVFISIGSALGFKYPVGNNQTAVQDNVKVSLAFGLSIATLAQSVGHISGAHLNPAVTLGLLLSCQISIFRALMYIIAQCVGAIVATAILSGITSSLPGNSL--GRNDLADGVNSGQGLGIEIIGTLQLVLCVLATTDRRRRDLGGS----APLAIGLSVALGHLLAIDYTGCGINPARSFGSAVI---THNFSNHWIF 212          
BLAST of CK933951 vs. ExPASy Swiss-Prot
Match: AQP1_RAT (Aquaporin-1 OS=Rattus norvegicus GN=Aqp1 PE=2 SV=4)

HSP 1 Score: 147.132 bits (370), Expect = 1.166e-34
Identity = 88/218 (40.37%), Postives = 124/218 (56.88%), Query Frame = 2
Query:  209 ELKSWSFYRAGIAEFMATFLFLYITVLTVMGVSKSNTKCSTVGIQGI--AWAFGGMIFALVYCTAGISGGHINPAVTFGLLLARKLSLTRAVFYMVMQCLGAVCGAGVVKGFEGSKNYERLGGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIFNKDHAWDDHWIF 856
            E+K   F+RA +AEF+A  LF++I++ + +G +    +  T+    +  + AFG  I  L      ISG H+NPAVT GLLL+ ++S+ RAV Y++ QC+GA+  + ++ G   S     L  G N +A G   G GLG EIIGT  LV  V + TD +R          APL IG +V L HL  I  TG GINPARS G+A++      + +HWIF
Sbjct:    4 EIKKKLFWRAVVAEFLAMTLFVFISIGSALGFNYPLERNQTLVQDNVKVSLAFGLSIATLAQSVGHISGAHLNPAVTLGLLLSCQISILRAVMYIIAQCVGAIVASAILSGITSSLLENSL--GRNDLARGVNSGQGLGIEIIGTLQLVLCVLATTDRRRRDLGGS----APLAIGLSVALGHLLAIDYTGCGINPARSFGSAVLTRN---FSNHWIF 212          
BLAST of CK933951 vs. ExPASy Swiss-Prot
Match: AQPA_RANES (Aquaporin FA-CHIP OS=Rana esculenta GN=AQPA PE=2 SV=1)

HSP 1 Score: 139.813 bits (351), Expect = 1.862e-32
Identity = 89/225 (39.56%), Postives = 128/225 (56.89%), Query Frame = 2
Query:  209 ELKSWSFYRAGIAEFMATFLFLYITVLTVMGVS-----KSNTKCSTVG----IQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLLLARKLSLTRAVFYMVMQCLGAVCGAGVVKGFEGSKNYERLGGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIFNKDHAWDDHWIF 856
            E K  +F+RA IAEF+A  LF++I++   +G +     K+N    TVG    I  ++ AFG  I  +      +SG H+NPAVT G LL+ ++S+ +AV Y++ QCLGAV    ++ G   +   E    G N ++ G + G GLG EI+ TF LV  V + TD +R+     V    PL IG +V L HL  I  TG G+NPARS G+A++  K+  +  HWIF
Sbjct:    4 EFKKKAFWRAVIAEFLAMILFVFISIGAALGFNFPIEEKAN---QTVGRSQDIVKVSLAFGISIATMAQSVGHVSGAHLNPAVTLGCLLSCQISILKAVMYIIAQCLGAVVATAILSGI--TSGLENNSLGLNGLSPGVSAGQGLGVEILVTFQLVLCVVAVTDRRRHDVSGSV----PLAIGLSVALGHLIAIDYTGCGMNPARSFGSAVL-TKNFTY--HWIF 216          
BLAST of CK933951 vs. ExPASy Swiss-Prot
Match: AQP4_RAT (Aquaporin-4 OS=Rattus norvegicus GN=Aqp4 PE=1 SV=1)

HSP 1 Score: 135.961 bits (341), Expect = 2.689e-31
Identity = 83/212 (39.15%), Postives = 121/212 (57.08%), Query Frame = 2
Query:  224 SFYRAGIAEFMATFLFLYITVLTVMGVSKSNTKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLLLARKLSLTRAVFYMVMQCLGAVCGAGVVKGFEGSKNYERLGGGANVVAHG-YTKGDGLGAEIIGTFVLVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIFNKDHAWDDHWIF 856
            +F++A  AEF+A  +F+ ++V + +    S      V +  I+  FG  I  +V C   ISGGHINPAVT  ++  RK+S+ ++VFY+  QCLGA+ GAG++           +GG      HG  T G GL  E+I TF LV+T+F++ D+KR    + V     L IGF+V + HL  I  TG  +NPARS G A+I      W++HWI+
Sbjct:   33 AFWKAVTAEFLAMLIFVLLSVGSTINWGGSENPLP-VDMVLISLCFGLSIATMVQCFGHISGGHINPAVTVAMVCTRKISIAKSVFYITAQCLGAIIGAGILYLVTPP---SVVGGLGVTTVHGNLTAGHGLLVELIITFQLVFTIFASCDSKR----TDVTGSVALAIGFSVAIGHLFAINYTGASMNPARSFGPAVIMGN---WENHWIY 233          
The following BLAST results are available for this feature:
BLAST of CK933951 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 192
Match NameE-valueIdentityDescription
AQP1_PIG1.246e-3641.82Aquaporin-1 OS=Sus scrofa GN=AQP1 PE=2 SV=3[more]
AQP1_BOVIN2.776e-3641.82Aquaporin-1 OS=Bos taurus GN=AQP1 PE=1 SV=3[more]
AQP1_SHEEP3.626e-3642.73Aquaporin-1 OS=Ovis aries GN=AQP1 PE=2 SV=3[more]
AQP1_HUMAN6.185e-3641.28Aquaporin-1 OS=Homo sapiens GN=AQP1 PE=1 SV=3[more]
AQP1_CANFA1.800e-3540.91Aquaporin-1 OS=Canis familiaris GN=AQP1 PE=2 SV=3[more]
AQP1_MOUSE2.350e-3540.83Aquaporin-1 OS=Mus musculus GN=Aqp1 PE=1 SV=3[more]
AQP1_PONAB5.236e-3540.83Aquaporin-1 OS=Pongo abelii GN=AQP1 PE=2 SV=3[more]
AQP1_RAT1.166e-3440.37Aquaporin-1 OS=Rattus norvegicus GN=Aqp1 PE=2 SV=4[more]
AQPA_RANES1.862e-3239.56Aquaporin FA-CHIP OS=Rana esculenta GN=AQPA PE=2 S... [more]
AQP4_RAT2.689e-3139.15Aquaporin-4 OS=Rattus norvegicus GN=Aqp4 PE=1 SV=1[more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCGF1004543_C04 Developing fruit peel at 38 DAFB Citrus sinensis cDNA clone P38DAB10003_IIF_C04 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK933951 ID=CK933951; Name=CK933951; organism=Citrus sinensis; type=EST; length=858bp
GGGGACGCTACATACACAACACAAACACAGCATCTTCTTTGAGAGAATAA
GAGAGCGAGAGAGAGGTTCATCATCGTCAATGGAGGGCAAAGAAGAGGAT
GTTAAGCTAGGAGCTAACAAGTTCTCAGAGAGGCAACCCATTGGGACATC
AGCTCAATCAGACAAAGACTACAAGGAGCCACCACCAGCACCTTTGTTTG
AGCCTGGTGAGCTCAAGTCATGGTCTTTTTACAGAGCTGGTATTGCAGAG
TTCATGGCTACCTTCTTGTTCCTCTACATCACTGTCTTGACTGTCATGGG
TGTCTCTAAGTCTAACACCAAGTGCTCCACTGTCGGTATCCAAGGAATTG
CTTGGGCCTTTGGTGGCATGATCTTTGCGCTTGTTTACTGCACTGCTGGT
ATCTCAGGAGGACACATCAACCCAGCAGTGACCTTCGGTCTGCTGCTAGC
GAGGAAGCTTTCCCTGACAAGGGCTGTCTTCTACATGGTCATGCAGTGCC
TTGGTGCTGTCTGTGGTGCTGGTGTTGTCAAGGGATTCGAAGGTTCAAAG
AACTACGAGAGGTTGGGTGGTGGAGCCAATGTTGTTGCTCACGGCTACAC
CAAGGGTGATGGTCTTGGTGCTGAGATTATTGGAACCTTTGTTCTTGTTT
ACACTGTCTTCTCTGCCACTGATGCGAAGAGAAACGCCAGAGACTCTCAT
GTCCCTATTTTGGCCCCCCTCCCCATTGGATTTGCTGTTTTCTTGGTCCA
CCTGGCCACCATCCCCATCACAGGAACTGGCATCAACCCAGCTAGGAGTC
TTGGAGCTGCCATCATCTTCAACAAAGACCATGCCTGGGATGACCATTGG
ATCTTCTG
back to top