CK933955
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CK933955 vs. ExPASy Swiss-Prot
Match: SODC_DROPS (Superoxide dismutase [Cu-Zn] OS=Drosophila pseudoobscura pseudoobscura GN=Sod PE=3 SV=3) HSP 1 Score: 177.178 bits (448), Expect = 9.632e-44 Identity = 87/151 (57.62%), Postives = 102/151 (67.55%), Query Frame = 2 Query: 113 MVKAVAVLGGTEGVKGTVSFAQE-GDGPTTVSGSLSGLKPGPHGFHVHALGDTTNGCMSTGPHFNPAGKEHGAPEDDNRHAXXXXXXXXXXXXTATFTVVDNQIPLSGPNSIIGRAVVVHADPDDLGKGGHELSKSTGNAGGRVACGIIGL 562 MVKAV V+ G KGTV F QE + P V+G + GL G HGFHVH GD TNGCMS+GPHFNP KEHGAP D+NRH ++ D++I L G +SIIGR VVVHAD DDLGKGGHELSK+TGNAG R+ CG+IG+ Sbjct: 1 MVKAVCVINGD--AKGTVFFEQETSEAPVKVTGEVLGLAKGLHGFHVHEFGDNTNGCMSSGPHFNPRNKEHGAPTDENRHLGDLGNIQAAGDSPTAVSITDSKITLFGADSIIGRTVVVHADADDLGKGGHELSKTTGNAGARIGCGVIGI 149
BLAST of CK933955 vs. ExPASy Swiss-Prot
Match: SODC_DROER (Superoxide dismutase [Cu-Zn] OS=Drosophila erecta GN=Sod PE=3 SV=3) HSP 1 Score: 175.252 bits (443), Expect = 3.660e-43 Identity = 88/151 (58.28%), Postives = 102/151 (67.55%), Query Frame = 2 Query: 113 MVKAVAVLGGTEGVKGTVSFAQEG-DGPTTVSGSLSGLKPGPHGFHVHALGDTTNGCMSTGPHFNPAGKEHGAPEDDNRHAXXXXXXXXXXXXTATFTVVDNQIPLSGPNSIIGRAVVVHADPDDLGKGGHELSKSTGNAGGRVACGIIGL 562 +VKAV V+ G KGTV F QE + P VSG + GL HGFHVH GD TNGCMS+GPHFNP GKEHGAP D+NRH ++ D++I L G +SIIGR VVVHAD DDLGKGGHELSKSTGNAG R+ CG+IG+ Sbjct: 2 VVKAVCVINGD--AKGTVFFEQESSETPVKVSGEVCGLAKCLHGFHVHEFGDNTNGCMSSGPHFNPHGKEHGAPVDENRHLGDLGNIEATGDCPTKVSITDSKITLFGADSIIGRTVVVHADADDLGKGGHELSKSTGNAGARIGCGVIGI 150
BLAST of CK933955 vs. ExPASy Swiss-Prot
Match: SODC_DROBS (Superoxide dismutase [Cu-Zn] (Fragment) OS=Drosophila busckii GN=Sod PE=3 SV=1) HSP 1 Score: 174.481 bits (441), Expect = 6.243e-43 Identity = 83/137 (60.58%), Postives = 95/137 (69.34%), Query Frame = 2 Query: 155 KGTVSFAQEGDG-PTTVSGSLSGLKPGPHGFHVHALGDTTNGCMSTGPHFNPAGKEHGAPEDDNRHAXXXXXXXXXXXXTATFTVVDNQIPLSGPNSIIGRAVVVHADPDDLGKGGHELSKSTGNAGGRVACGIIGL 562 KGTV F QE + P V+G ++GL G HGFHVH GD TNGCMS+GPHFNP GKEHGAP D+NRH + D +I L G NSIIGR VVVHADPDDLGKGGHELSK+TGNAG R+ CG+IG+ Sbjct: 6 KGTVFFEQESEKCPVKVTGEVTGLAKGLHGFHVHEFGDNTNGCMSSGPHFNPQGKEHGAPTDENRHLGDLGNITATGDGPTAVDICDCKITLFGANSIIGRTVVVHADPDDLGKGGHELSKTTGNAGARIGCGVIGI 142
BLAST of CK933955 vs. ExPASy Swiss-Prot
Match: SODC_HALRO (Superoxide dismutase [Cu-Zn] OS=Halocynthia roretzi PE=1 SV=2) HSP 1 Score: 172.555 bits (436), Expect = 2.372e-42 Identity = 85/149 (57.05%), Postives = 104/149 (69.80%), Query Frame = 2 Query: 116 VKAVAVLGGTEGVKGTVSFAQEGDGPTTVSGSLSGLKPGPHGFHVHALGDTTNGCMSTGPHFNPAGKEHGAPEDDNRHAXXXXXXXXXXXXTATFTVVDNQIPLSGPNSIIGRAVVVHADPDDLGKGGHELSKSTGNAGGRVACGIIGL 562 +KAV VL G+ VKGT++F Q+ G TV+G +SGL PG HGFH+H GD TNGC S+G HFNP + HGAPEDD RH AT + D I L+G +SIIGRAVVVHA DDLGKGGHE SK+TG+AGGR++CG+IG+ Sbjct: 3 IKAVCVLVGS--VKGTLNFKQDAIGSCTVTGEVSGLIPGKHGFHIHEYGDLTNGCTSSGGHFNPFKQIHGAPEDDIRHVGDLGNITADSSGVATVNITDRMISLTGEHSIIGRAVVVHAGEDDLGKGGHEDSKTTGHAGGRLSCGVIGI 149
BLAST of CK933955 vs. ExPASy Swiss-Prot
Match: SODC_CERCA (Superoxide dismutase [Cu-Zn] OS=Ceratitis capitata GN=Sod PE=3 SV=2) HSP 1 Score: 170.244 bits (430), Expect = 1.177e-41 Identity = 84/151 (55.63%), Postives = 97/151 (64.24%), Query Frame = 2 Query: 113 MVKAVAVLGGTEGVKGTVSFAQE-GDGPTTVSGSLSGLKPGPHGFHVHALGDTTNGCMSTGPHFNPAGKEHGAPEDDNRHAXXXXXXXXXXXXTATFTVVDNQIPLSGPNSIIGRAVVVHADPDDLGKGGHELSKSTGNAGGRVACGIIGL 562 +VKAV V+ G VKGTV F Q+ P V+G ++GL G HGFHVH GD TNGC S GPHFNP G HGAP D NRH + D I L G NSI+GR +VVHADPDDLGKGGHELSK+TGNAG R+ CG+IG+ Sbjct: 2 VVKAVCVINGD--VKGTVHFEQQDAKSPVLVTGEVNGLAKGLHGFHVHEFGDNTNGCTSAGPHFNPYGNSHGAPSDLNRHLGDLGNIEASGDGATKVEISDKLITLFGENSIVGRTIVVHADPDDLGKGGHELSKTTGNAGARLGCGVIGI 150
BLAST of CK933955 vs. ExPASy Swiss-Prot
Match: SODC2_XENLA (Superoxide dismutase [Cu-Zn] B OS=Xenopus laevis GN=sod1-B PE=1 SV=3) HSP 1 Score: 168.318 bits (425), Expect = 4.474e-41 Identity = 82/149 (55.03%), Postives = 95/149 (63.76%), Query Frame = 2 Query: 113 MVKAVAVLGGTEGVKGTVSFAQEGDGPTTVSGSLSGLKPGPHGFHVHALGDTTNGCMSTGPHFNPAGKEHGAPEDDNRHAXXXXXXXXXXXXTATFTVVDNQIPLSGPNSIIGRAVVVHADPDDLGKGGHELSKSTGNAGGRVACGIIG 559 MVKAV VL G+ VKG V F Q+ +G +V G + GL G HGFH+H GD TNGCMS G HFNP K HGAP D +RH A F + D+ I L GPNSIIGR VVH DDLGKGG++ S TGNAGGR+ACG+IG Sbjct: 1 MVKAVCVLAGSGDVKGVVHFEQQDEGAVSVEGKIEGLTDGLHGFHIHVFGDNTNGCMSAGSHFNPENKNHGAPGDTDRHV-GDLGNVTAEGGVAQFKITDSLISLKGPNSIIGRTAVVHEKADDLGKGGNDESLKTGNAGGRLACGVIG 148
BLAST of CK933955 vs. ExPASy Swiss-Prot
Match: SODC1_XENLA (Superoxide dismutase [Cu-Zn] A OS=Xenopus laevis GN=sod1-A PE=1 SV=2) HSP 1 Score: 167.162 bits (422), Expect = 9.968e-41 Identity = 82/149 (55.03%), Postives = 93/149 (62.42%), Query Frame = 2 Query: 113 MVKAVAVLGGTEGVKGTVSFAQEGDGPTTVSGSLSGLKPGPHGFHVHALGDTTNGCMSTGPHFNPAGKEHGAPEDDNRHAXXXXXXXXXXXXTATFTVVDNQIPLSGPNSIIGRAVVVHADPDDLGKGGHELSKSTGNAGGRVACGIIG 559 MVKAV VL G+ VKG V F Q+ DG TV G + GL G HGFH+H GD TNGC+S GPHFNP K HG+P+D +RH A F D QI L G SIIGR VVH DDLGKGG + S TGNAGGR+ACG+IG Sbjct: 1 MVKAVCVLAGSGDVKGVVRFEQQDDGDVTVEGKIEGLTDGNHGFHIHVFGDNTNGCLSAGPHFNPQNKNHGSPKDADRHV-GDLGNVTAEGGVAQFKFTDPQISLKGERSIIGRTAVVHEKQDDLGKGGDDESLKTGNAGGRLACGVIG 148
BLAST of CK933955 vs. ExPASy Swiss-Prot
Match: SODC_CAVPO (Superoxide dismutase [Cu-Zn] OS=Cavia porcellus GN=SOD1 PE=1 SV=3) HSP 1 Score: 166.777 bits (421), Expect = 1.302e-40 Identity = 78/148 (52.70%), Postives = 95/148 (64.19%), Query Frame = 2 Query: 119 KAVAVLGGTEGVKGTVSFAQEGDGPTTVSGSLSGLKPGPHGFHVHALGDTTNGCMSTGPHFNPAGKEHGAPEDDNRHAXXXXXXXXXXXXTATFTVVDNQIPLSGPNSIIGRAVVVHADPDDLGKGGHELSKSTGNAGGRVACGIIGL 562 KAV VL G V+G + F Q+ +GP V G ++GL G HGFHVH GD T GC S GPHFNP K+HG P+D+ RH A ++ D+ I LSG NSIIGR +VVH PDDLGKGG+E S TGNAG R+ACG+IG+ Sbjct: 4 KAVCVLKGDGPVQGIIHFEQKANGPVVVKGRITGLVEGKHGFHVHEFGDNTQGCTSAGPHFNPLSKKHGGPQDEERHVGDLGNVTAGADGVANVSIEDSLISLSGANSIIGRTMVVHEKPDDLGKGGNEESTKTGNAGSRLACGVIGI 151
BLAST of CK933955 vs. ExPASy Swiss-Prot
Match: SODC_CALJA (Superoxide dismutase [Cu-Zn] OS=Callithrix jacchus GN=SOD1 PE=2 SV=3) HSP 1 Score: 166.392 bits (420), Expect = 1.700e-40 Identity = 81/150 (54.00%), Postives = 100/150 (66.67%), Query Frame = 2 Query: 116 VKAVAVLGGTEGVKGTVSFAQ-EGDGPTTVSGSLSGLKPGPHGFHVHALGDTTNGCMSTGPHFNPAGKEHGAPEDDNRHAXXXXXXXXXXXXTATFTVVDNQIPLSGPNSIIGRAVVVHADPDDLGKGGHELSKSTGNAGGRVACGIIGL 562 +KAV VL G V+GT++F Q E +GP V GS++GL G HGFHVH GD T GC S GPHFNP ++HG PED+ RH A ++ D+ I LSG +SIIGR +VVH DDLGKGG+E SK TGNAGGR+ACG+IG+ Sbjct: 3 MKAVCVLKGDGPVQGTINFEQKESNGPVKVWGSITGLAEGLHGFHVHQFGDNTQGCTSAGPHFNPLSRKHGGPEDEERHVGDLGNVTAGKDGVAKVSIEDSVISLSGDHSIIGRTLVVHEKADDLGKGGNEESKKTGNAGGRLACGVIGI 152
BLAST of CK933955 vs. ExPASy Swiss-Prot
Match: SODC_DANRE (Superoxide dismutase [Cu-Zn] OS=Danio rerio GN=sod1 PE=2 SV=1) HSP 1 Score: 165.622 bits (418), Expect = 2.900e-40 Identity = 82/149 (55.03%), Postives = 96/149 (64.43%), Query Frame = 2 Query: 119 KAVAVLGGTEGVKGTVSFAQEGDG-PTTVSGSLSGLKPGPHGFHVHALGDTTNGCMSTGPHFNPAGKEHGAPEDDNRHAXXXXXXXXXXXXTATFTVVDNQIPLSGPNSIIGRAVVVHADPDDLGKGGHELSKSTGNAGGRVACGIIGL 562 KAV VL GT V GTV F QEG+ P V+G ++GL PG HGFHVHA GD TNGC+S GPHFNP K HG P D RH A + D + LSG +SIIGR +V+H DDLGKGG+E S TGNAGGR+ACG+IG+ Sbjct: 4 KAVCVLKGTGEVTGTVYFNQEGEKKPVKVTGEITGLTPGKHGFHVHAFGDNTNGCISAGPHFNPHDKTHGGPTDSVRHVGDLGNVTADASGVAKIEIEDAMLTLSGQHSIIGRTMVIHEKEDDLGKGGNEESLKTGNAGGRLACGVIGI 152 The following BLAST results are available for this feature:
BLAST of CK933955 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 143
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Sequences
The
following sequences are available for this feature:
EST sequence >CK933955 ID=CK933955; Name=CK933955; organism=Citrus sinensis; type=EST; length=810bpback to top |