CK933958
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK933958 vs. ExPASy Swiss-Prot
Match: PEL15_ARATH (Probable pectate lyase 15 OS=Arabidopsis thaliana GN=At4g13710 PE=2 SV=1) HSP 1 Score: 340.887 bits (873), Expect = 8.068e-94 Identity = 153/221 (69.23%), Postives = 185/221 (83.71%), Query Frame = 3 Query: 144 DPELVVEEVHKSINAS------RRNLGFLSCGTGNPIDDCWRCDPKWEENRQQLADCAIGFGKQAIGGKDGKIYVVTDSGDDDPVNPKPGTLRYAVIQDEPLWIIFARDMVITLKEELIMNSFKTIDGRGASVHIAGGPCITIQYVTNIIIHGINIHDCKRGGNANVRDSPSHYGWRTISDGDGVSIFGGSHVWVDHCSLSNCNDGLIDAIHGSTAITISN 788 DP++V +EV K + S RR LGF SCGTGNPIDDCWRCD W +NR++LADC IGFG+ AIGG+DG+ Y+VTD D+D VNPKPGTLR+AVIQ+EPLWI+F RDMVI LK+ELIMNSFKTID RG++VHIA G CITIQ++TN+IIHG++IHDCK GNA VR SPSH+GWRT++DGD VSIFG SH+W+DH SLS+C DGL+DA+ GSTAIT+SN Sbjct: 88 DPDMVADEVAKLVQMSEQNRTARRKLGFFSCGTGNPIDDCWRCDRNWHKNRKRLADCGIGFGRNAIGGRDGRFYIVTDPTDEDVVNPKPGTLRHAVIQEEPLWIVFKRDMVIELKQELIMNSFKTIDARGSNVHIANGACITIQFITNVIIHGLHIHDCKPTGNAMVRSSPSHFGWRTMADGDAVSIFGSSHIWIDHNSLSHCADGLVDAVMGSTAITVSN 308 HSP 2 Score: 25.0238 bits (53), Expect = 8.068e-94 Identity = 9/12 (75.00%), Postives = 11/12 (91.67%), Query Frame = 1 Query: 790 NYMTHHNKVMLL 825 N+ THHN+VMLL Sbjct: 309 NHFTHHNEVMLL 320
BLAST of CK933958 vs. ExPASy Swiss-Prot
Match: PEL1_ARATH (Probable pectate lyase 1 OS=Arabidopsis thaliana GN=At1g04680 PE=2 SV=2) HSP 1 Score: 337.035 bits (863), Expect = 6.771e-93 Identity = 150/217 (69.12%), Postives = 182/217 (83.87%), Query Frame = 3 Query: 138 VQDPELVVEEVHKSINASRRNLGFLSCGTGNPIDDCWRCDPKWEENRQQLADCAIGFGKQAIGGKDGKIYVVTDSGDDDPVNPKPGTLRYAVIQDEPLWIIFARDMVITLKEELIMNSFKTIDGRGASVHIAGGPCITIQYVTNIIIHGINIHDCKRGGNANVRDSPSHYGWRTISDGDGVSIFGGSHVWVDHCSLSNCNDGLIDAIHGSTAITISN 788 V D L + E+ + RR LG+ +CGTGNPIDDCWRCDP W +NR++LADC IGFG+ AIGG+DG+ YVVTD DD+PVNP+PGTLR+AVIQD PLWI+F RDMVI LK+ELI+NSFKTIDGRGA+VHIA G CITIQ+VTN+I+HG++IHDCK GNA VR S +H+GWRT++DGD +SIFG SHVW+DH SLS+C DGL+DA+ GSTAITISN Sbjct: 51 VADEVLALTEMSVRNHTERRKLGYFTCGTGNPIDDCWRCDPNWHKNRKRLADCGIGFGRNAIGGRDGRFYVVTDPRDDNPVNPRPGTLRHAVIQDRPLWIVFKRDMVIQLKQELIVNSFKTIDGRGANVHIANGGCITIQFVTNVIVHGLHIHDCKPTGNAMVRSSETHFGWRTMADGDAISIFGSSHVWIDHNSLSHCADGLVDAVMGSTAITISN 267 HSP 2 Score: 25.7942 bits (55), Expect = 6.771e-93 Identity = 9/12 (75.00%), Postives = 12/12 (100.00%), Query Frame = 1 Query: 790 NYMTHHNKVMLL 825 N++THHN+VMLL Sbjct: 268 NHLTHHNEVMLL 279
BLAST of CK933958 vs. ExPASy Swiss-Prot
Match: PEL12_ARATH (Probable pectate lyase 12 OS=Arabidopsis thaliana GN=At3g53190 PE=2 SV=2) HSP 1 Score: 317.775 bits (813), Expect = 1.513e-86 Identity = 149/227 (65.64%), Postives = 173/227 (76.21%), Query Frame = 3 Query: 135 PVQDPELVVEEVHKSINAS--RRNL-------GFLSCGTGNPIDDCWRCDPKWEENRQQLADCAIGFGKQAIGGKDGKIYVVTDSGDDDPVNPKPGTLRYAVIQDEPLWIIFARDMVITLKEELIMNSFKTIDGRGASVHIAGGPCITIQYVTNIIIHGINIHDCKRGGNANVRDSPSHYGWRTISDGDGVSIFGGSHVWVDHCSLSNCNDGLIDAIHGSTAITISN 788 P DPELV +V +NAS RR G C TGNPIDDCW+CDP W NRQ LADC IGFG+ A+GGK G+ Y VTDS DDD VNPKPGTLRY VIQ+EPLWI+F +M+I LK+ELI NS+KT+DGRGA+VHI GG CIT+QYV+NIIIH I+IH C + GN NVR SP+HYG+RT SDGDG+SIFG +W+DHCSLS C DGLIDA+ GST ITISN Sbjct: 34 PHPDPELVAYQVQWKVNASITRRQALDTTDQAGSTPCITGNPIDDCWKCDPNWPNNRQGLADCGIGFGQYALGGKGGQFYFVTDSSDDDAVNPKPGTLRYGVIQEEPLWIVFPSNMMIKLKQELIFNSYKTLDGRGANVHIVGGGCITLQYVSNIIIHNIHIHHCYQSGNTNVRSSPTHYGFRTKSDGDGISIFGSKDIWIDHCSLSRCKDGLIDAVMGSTGITISN 260 HSP 2 Score: 23.8682 bits (50), Expect = 1.513e-86 Identity = 8/12 (66.67%), Postives = 11/12 (91.67%), Query Frame = 1 Query: 790 NYMTHHNKVMLL 825 N+ +HHN+VMLL Sbjct: 261 NFFSHHNEVMLL 272
BLAST of CK933958 vs. ExPASy Swiss-Prot
Match: PEL9_ARATH (Probable pectate lyase 9 OS=Arabidopsis thaliana GN=At3g24230 PE=2 SV=1) HSP 1 Score: 317.775 bits (813), Expect = 2.575e-86 Identity = 148/228 (64.91%), Postives = 175/228 (76.75%), Query Frame = 3 Query: 123 ISSSPVQDPELVVEEVHKSINAS------RRNLGFLSCGTGNPIDDCWRCDPKWEENRQQLADCAIGFGKQAIGGKDGKIYVVTDSGDDDPVNPKPGTLRYAVIQDEPLWIIFARDMVITLKEELIMNSFKTIDGRGASVHIAGGPCITIQYVTNIIIHGINIHDCKRGGNANVRDSPSHYGWRTISDGDGVSIFGGSHVWVDHCSLSNCNDGLIDAIHGSTAITISN 788 ++ V DP+ V EV I+ S RR LGF SCG GN IDDCWRCD W +NR+ LADC +GFG +A GG++G YVVTD DDD VNPKPGTLR+AVIQ EPLWIIF RDMVI LK+ELIMNSFKTID RGA+VHIA G CITIQ +TN+I+HG++IHDCKR GN VR SPS G+R +DGD ++IFG SH+W+DH SLSNC DGL+D ++GSTAITISN Sbjct: 63 LNEHAVTDPDKVAHEVSNLIHMSEQNITARRKLGFFSCGNGNLIDDCWRCDRNWNKNRKHLADCGMGFGSKAFGGRNGSYYVVTDHSDDDVVNPKPGTLRHAVIQVEPLWIIFKRDMVIKLKQELIMNSFKTIDARGANVHIANGACITIQNITNVIVHGLHIHDCKRTGNVTVRSSPSQAGFRGTADGDAINIFGSSHIWIDHNSLSNCTDGLVDVVNGSTAITISN 290 HSP 2 Score: 23.0978 bits (48), Expect = 2.575e-86 Identity = 8/12 (66.67%), Postives = 11/12 (91.67%), Query Frame = 1 Query: 790 NYMTHHNKVMLL 825 N+ THH++VMLL Sbjct: 291 NHFTHHDEVMLL 302
BLAST of CK933958 vs. ExPASy Swiss-Prot
Match: PEL2_ARATH (Putative pectate lyase 2 OS=Arabidopsis thaliana GN=At1g11920 PE=2 SV=1) HSP 1 Score: 276.944 bits (707), Expect = 3.365e-74 Identity = 127/187 (67.91%), Postives = 149/187 (79.68%), Query Frame = 3 Query: 228 NPIDDCWRCDPKWEENRQQLADCAIGFGKQAIGGKDGKIYVVTDSGDDDPVNPKPGTLRYAVIQDEPLWIIFARDMVITLKEELIMNSFKTIDGRGASVHIAGGPCITIQYVTNIIIHGINIHDCKRGGNANVRDSPSHYGWRTISDGDGVSIFGGSHVWVDHCSLSNCNDGLIDAIHGSTAITISN 788 NPID CWR +P W NR+ LADCA+GFGK A+GGK G IYVVT+ DD P NP+PGTLRYAVIQ +PLWI FARDMVI L+ ELIMNS+KTIDGRGA V IA GPCITIQ+V+++IIHGI+IHDCK G + VR SP+H G R SDGD ++IF SH+W+DHC S C DGLID +H STA+TISN Sbjct: 37 NPIDSCWRRNPYWASNRRALADCAVGFGKSAVGGKYGSIYVVTNPSDD-PENPRPGTLRYAVIQSKPLWITFARDMVIVLRNELIMNSYKTIDGRGAKVEIAYGPCITIQHVSHVIIHGISIHDCKPGKSGRVRSSPTHVGSRKGSDGDAIAIFDSSHIWIDHCFFSRCQDGLIDVLHASTAVTISN 222 HSP 2 Score: 23.483 bits (49), Expect = 3.365e-74 Identity = 9/12 (75.00%), Postives = 10/12 (83.33%), Query Frame = 1 Query: 790 NYMTHHNKVMLL 825 NY T H+KVMLL Sbjct: 223 NYFTQHDKVMLL 234
BLAST of CK933958 vs. ExPASy Swiss-Prot
Match: PEL13_ARATH (Probable pectate lyase 13 OS=Arabidopsis thaliana GN=PMR6 PE=1 SV=1) HSP 1 Score: 265.774 bits (678), Expect = 2.568e-71 Identity = 124/205 (60.49%), Postives = 155/205 (75.61%), Query Frame = 3 Query: 177 SINASRRNLGFLSCGTGNPIDDCWRC-DPKWEENRQQLADCAIGFGKQAIGGKDGKIYVVTDSGDDDPVNPKPGTLRYAVIQDEPLWIIFARDMVITLKEELIMNSFKTIDGRGASVHIAGGPCITIQYVTNIIIHGINIHDCKRGGNANVRDSPSHYGWRTISDGDGVSIFGGSHVWVDHCSLSNCNDGLIDAIHGSTAITISN 788 S ++S + SC TGNPIDDCWRC D W NRQ+LADC+IGFG +GGK+GKIYVVTDS D++P NP PGTLRY VIQ+EPLWI+F+ +M+I LK+ELI+NS+KT+DGRG++VHI G C+T+QYV +IIIH ++I+DCK R SDGDG+SIFG +WVDHCS+S+C DGLIDA+ GSTAITISN Sbjct: 62 SSSSSSSSSSSSSCRTGNPIDDCWRCSDADWSTNRQRLADCSIGFGHGTLGGKNGKIYVVTDSSDNNPTNPTPGTLRYGVIQEEPLWIVFSSNMLIRLKQELIINSYKTLDGRGSAVHITGNGCLTLQYVQHIIIHNLHIYDCKPSAGFEKRGR---------SDGDGISIFGSQKIWVDHCSMSHCTDGLIDAVMGSTAITISN 257 HSP 2 Score: 25.0238 bits (53), Expect = 2.568e-71 Identity = 9/12 (75.00%), Postives = 11/12 (91.67%), Query Frame = 1 Query: 790 NYMTHHNKVMLL 825 NY THH++VMLL Sbjct: 258 NYFTHHDEVMLL 269
BLAST of CK933958 vs. ExPASy Swiss-Prot
Match: PEL17_ARATH (Putative pectate lyase 17 OS=Arabidopsis thaliana GN=At4g22090 PE=3 SV=1) HSP 1 Score: 261.536 bits (667), Expect = 1.381e-69 Identity = 121/187 (64.71%), Postives = 145/187 (77.54%), Query Frame = 3 Query: 228 NPIDDCWRCDPKWEENRQQLADCAIGFGKQAIGGKDGKIYVVTDSGDDDPVNPKPGTLRYAVIQDEPLWIIFARDMVITLKEELIMNSFKTIDGRGASVHIAGGPCITIQYVTNIIIHGINIHDCKRGGNANVRDSPSHYGWRTISDGDGVSIFGGSHVWVDHCSLSNCNDGLIDAIHGSTAITISN 788 NP+D CWR W+ NR+ LADCA+GFG +GGK G IYVVT+ D+ NP PG+LRY VIQ +PLWI FA+DMVITL EL++NS+KTIDGRGA V IA GPCITIQ VTN+I+HGI+IHDCK G + VR SP+H G R SDGD ++IFG S+VW+DHC L++C DGLID IH STAITISN Sbjct: 47 NPVDSCWRLKSDWDVNREDLADCAVGFGSSTLGGKKGNIYVVTNPYDNAQ-NPHPGSLRYGVIQAKPLWITFAKDMVITLANELMVNSYKTIDGRGAKVEIAYGPCITIQDVTNVIVHGISIHDCKPGKSGKVRSSPTHVGHRKGSDGDAITIFGSSNVWIDHCYLASCTDGLIDVIHASTAITISN 232 HSP 2 Score: 23.483 bits (49), Expect = 1.381e-69 Identity = 9/12 (75.00%), Postives = 10/12 (83.33%), Query Frame = 1 Query: 790 NYMTHHNKVMLL 825 NY T H+KVMLL Sbjct: 233 NYFTQHDKVMLL 244
BLAST of CK933958 vs. ExPASy Swiss-Prot
Match: PEL59_SOLLC (Probable pectate lyase P59 OS=Solanum lycopersicum GN=LAT59 PE=2 SV=1) HSP 1 Score: 263.077 bits (671), Expect = 1.387e-69 Identity = 126/206 (61.17%), Postives = 152/206 (73.79%), Query Frame = 3 Query: 183 NASRRNLGFLS----CGTGNPIDDCWRCDPKWEENRQQLADCAIGFGKQAIGGKDGKIYVVTDSGDDDPVNPKPGTLRYAVIQDEPLWIIFARDMVITLKEELIMNSFKTIDGRGASVHIAGGPCITIQYVTNIIIHGINIHDCKRGGNANVRDSPSHYGWRTISDGDGVSIFGGSHVWVDHCSLSNCNDGLIDAIHGSTAITISN 788 N++RR LG C NPID CWRCDP W +NR++LADCA+GFG +AIGGKDG+ YVVTD+ DD +PKPGTLR+AVIQ EPLWIIF R M I L +E+IM S KTID RG +VHI G IT+QY+ N+IIHG++IHD G VRD+ H G RT SDGDG+SIFG S++W+DH S+ C DGLIDA+ GST ITISN Sbjct: 81 NSTRRGLGTKKYTGPCMVTNPIDKCWRCDPNWADNRKKLADCAMGFGSKAIGGKDGEFYVVTDNSDDYN-DPKPGTLRHAVIQKEPLWIIFKRGMNIRLHQEMIMQSDKTIDARGVNVHITKGAGITLQYIKNVIIHGLHIHDIVEGNGGMVRDAVDHIGIRTKSDGDGISIFGASYIWIDHVSMQRCYDGLIDAVEGSTGITISN 285
BLAST of CK933958 vs. ExPASy Swiss-Prot
Match: PEL16_ARATH (Probable pectate lyase 16 OS=Arabidopsis thaliana GN=At4g22080 PE=2 SV=1) HSP 1 Score: 255.758 bits (652), Expect = 7.407e-68 Identity = 117/187 (62.57%), Postives = 143/187 (76.47%), Query Frame = 3 Query: 228 NPIDDCWRCDPKWEENRQQLADCAIGFGKQAIGGKDGKIYVVTDSGDDDPVNPKPGTLRYAVIQDEPLWIIFARDMVITLKEELIMNSFKTIDGRGASVHIAGGPCITIQYVTNIIIHGINIHDCKRGGNANVRDSPSHYGWRTISDGDGVSIFGGSHVWVDHCSLSNCNDGLIDAIHGSTAITISN 788 NP+D CWR W NR+ LADC +GFG +GGK G +YVVT+ D+ NP+PG+LRY VIQ +PLWI FA+DMVITL+ EL++NS+KTIDGRGA V IA GPCITIQ VTN+I+HGI+IHDCK G VR SP+H G R SDGD ++IFG S++W+DHC L++C DGLID IH ST ITISN Sbjct: 47 NPVDSCWRLKSDWAANRKDLADCVVGFGSSTLGGKKGNLYVVTNPYDNAQ-NPQPGSLRYGVIQAKPLWITFAKDMVITLENELMVNSYKTIDGRGAKVEIAYGPCITIQDVTNVIVHGISIHDCKPGKYGMVRSSPTHVGHRKGSDGDAIAIFGSSNIWIDHCYLASCTDGLIDVIHASTGITISN 232 HSP 2 Score: 23.483 bits (49), Expect = 7.407e-68 Identity = 9/12 (75.00%), Postives = 10/12 (83.33%), Query Frame = 1 Query: 790 NYMTHHNKVMLL 825 NY T H+KVMLL Sbjct: 233 NYFTQHDKVMLL 244
BLAST of CK933958 vs. ExPASy Swiss-Prot
Match: PEL_LILLO (Pectate lyase OS=Lilium longiflorum PE=2 SV=1) HSP 1 Score: 252.292 bits (643), Expect = 2.448e-66 Identity = 126/223 (56.50%), Postives = 154/223 (69.06%), Query Frame = 3 Query: 147 PELVVEEVHKSI------NASRRNLG---FLSCGTGNPIDDCWRCDPKWEENRQQLADCAIGFGKQAIGGKDGKIYVVTDSGDDDPVNPKPGTLRYAVIQDEPLWIIFARDMVITLKEELIMNSFKTIDGRGASVHIAGGPCITIQYVTNIIIHGINIHDCKRGGNANVRDSPSHYGWRTISDGDGVSIFGGSHVWVDHCSLSNCNDGLIDAIHGSTAITISN 788 PE V +K++ N++RRNL C NPID CWRC W NR+ L C GFG++ GG G+IYVVTD DD +PK GTLR+ VIQD PLWIIF + MVI LK+ELI+N+ KTIDGRGA+V IAGG +T+Q+V N+IIHGI+IHD K G +RDS H G RT SDGDG+SI G S++W+DH SL+ C+DGLID I GSTAITISN Sbjct: 50 PEEVTNHFNKAVHSSFEGNSTRRNLRTNKLGQCLATNPIDRCWRCKKNWSANRKDLVKCVKGFGRKTTGGAAGEIYVVTDPSDDSLTDPKFGTLRWGVIQDRPLWIIFGKSMVIRLKQELIINNDKTIDGRGANVQIAGGAQLTVQFVHNVIIHGIHIHDIKPGEGGLIRDSEKHSGIRTRSDGDGISIIGSSNIWIDHVSLARCSDGLIDVILGSTAITISN 272 The following BLAST results are available for this feature:
BLAST of CK933958 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 38
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CK933958 ID=CK933958; Name=CK933958; organism=Citrus sinensis; type=EST; length=827bpback to top |