CK933958
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CK933958 vs. ExPASy Swiss-Prot
Match: PEL19_ARATH (Putative pectate lyase 19 OS=Arabidopsis thaliana GN=At5g15110 PE=2 SV=1) HSP 1 Score: 249.21 bits (635), Expect = 1.495e-65 Identity = 122/230 (53.04%), Postives = 158/230 (68.70%), Query Frame = 3 Query: 129 SSPVQDPELVVEEVHKSINASRRNL-----GFLS-----CGTGNPIDDCWRCDPKWEENRQQLADCAIGFGKQAIGGKDGKIYVVTDSGDDDPVNPKPGTLRYAVIQDEPLWIIFARDMVITLKEELIMNSFKTIDGRGASVHIAGGPCITIQYVTNIIIHGINIHDCKRGGNANVRDSPSHYGWRTISDGDGVSIFGGSHVWVDHCSLSNCNDGLIDAIHGSTAITISN 788 + P ++ + +E + S N++RR+L G S C NPID CWRC W + R++L C GFG + GGK G+IYVVT + D+D VNPKPGTLR+AVIQ EPLWIIF DM I L +EL++NS KTID RGA+VH+A G IT+Q+V N+IIHG++IH +RDS H+G RT +DGDG+SI+G S++W+DH S+S C DGLIDAI GST ITISN Sbjct: 79 AKPEEEEKEFIEMLGSSTNSTRRSLRGKGKGKWSKLKGPCTASNPIDKCWRCRSDWAKRRKKLTRCVRGFGHRTTGGKRGRIYVVTSNLDEDMVNPKPGTLRHAVIQKEPLWIIFKNDMSIRLNQELLINSHKTIDARGANVHVAHGAGITMQFVKNVIIHGLHIHHISESSGGMIRDSVDHFGMRTRADGDGLSIYGSSNIWLDHISMSKCQDGLIDAIVGSTGITISN 308 HSP 2 Score: 22.3274 bits (46), Expect = 1.495e-65 Identity = 8/12 (66.67%), Postives = 10/12 (83.33%), Query Frame = 1 Query: 790 NYMTHHNKVMLL 825 ++ THHN VMLL Sbjct: 309 SHFTHHNDVMLL 320
BLAST of CK933958 vs. ExPASy Swiss-Prot
Match: PEL6_ARATH (Probable pectate lyase 6 OS=Arabidopsis thaliana GN=At2g02720 PE=2 SV=1) HSP 1 Score: 249.595 bits (636), Expect = 1.587e-65 Identity = 115/210 (54.76%), Postives = 157/210 (74.76%), Query Frame = 3 Query: 159 VEEVHKSINASRRNLGFLSCGTGNPIDDCWRCDPKWEENRQQLADCAIGFGKQAIGGKDGKIYVVTDSGDDDPVNPKPGTLRYAVIQDEPLWIIFARDMVITLKEELIMNSFKTIDGRGASVHIAGGPCITIQYVTNIIIHGINIHDCKRGGNANVRDSPSHYGWRTISDGDGVSIFGGSHVWVDHCSLSNCNDGLIDAIHGSTAITISN 788 + +V + +RR F S N ID CWR D W++NR++LADC +GFG++ GGK+G IYVVTD D+D + PKPGT+R+AV +D PLWIIFAR M+I L++ELI+ + KTIDGRGA ++I GG +T+Q+V N+IIH I+I KRG + DS H+G RT+SDGDG++IFG ++VW+DH S+++C+DG+IDAI GSTAITISN Sbjct: 81 LRQVGRGKKTTRRGGRFESL---NAIDKCWRGDKNWDKNRKKLADCVLGFGRKTTGGKNGPIYVVTDPSDNDLLKPKPGTIRHAVTRDRPLWIIFARSMIIKLQQELIITNDKTIDGRGAKIYITGGAGLTLQFVRNVIIHNIHIKQIKRGAGGLIIDSEQHFGLRTVSDGDGINIFGATNVWIDHVSMTDCSDGMIDAIMGSTAITISN 287
BLAST of CK933958 vs. ExPASy Swiss-Prot
Match: PEL7_ARATH (Probable pectate lyase 7 OS=Arabidopsis thaliana GN=At3g01270 PE=2 SV=1) HSP 1 Score: 247.284 bits (630), Expect = 5.637e-65 Identity = 122/229 (53.28%), Postives = 154/229 (67.25%), Query Frame = 3 Query: 144 DPELVVEEVHKSINASRRNLGFLSCGTG--------------NPIDDCWRCDPKWEENRQQLADCAIGFGKQAIGGKDGKIYVVTDSGDDDPVNPKPGTLRYAVIQDEPLWIIFARDMVITLKEELIMNSFKTIDGRGASVHIAGGPCITIQYVTNIIIHGINIHDCKRGGNANVRDSPSHYGWRTISDGDGVSIFGGSHVWVDHCSLSNCNDGLIDAIHGSTAITISN 788 + E V+E + N++RR+L G G NPID CWRC P W R++L C GFG + GGK G+IYVVT DDD VNP+PGTLR+AVIQ EPLWI+F DM I L +EL++ S KTID RGA+VHIA G IT+QYV NIIIHG+++H + +RDS +H+G R +DGDG+SIFG +++W+DH S+S C DGLIDAI GSTAITISN Sbjct: 83 EEEDVIEMISSPTNSTRRSLTGRGKGKGKGKWSKLTGPCTASNPIDKCWRCQPDWARRRKKLVHCVRGFGYRTTGGKRGRIYVVTSPRDDDMVNPRPGTLRHAVIQKEPLWIVFKHDMSIRLSQELMITSDKTIDARGANVHIAYGAGITMQYVHNIIIHGLHVHHIVKSSGGLIRDSINHFGHRGEADGDGISIFGATNIWLDHISMSKCQDGLIDAIMGSTAITISN 311 HSP 2 Score: 22.3274 bits (46), Expect = 5.637e-65 Identity = 8/12 (66.67%), Postives = 10/12 (83.33%), Query Frame = 1 Query: 790 NYMTHHNKVMLL 825 ++ THHN VMLL Sbjct: 312 SHFTHHNDVMLL 323
BLAST of CK933958 vs. ExPASy Swiss-Prot
Match: PEL3_ARATH (Probable pectate lyase 3 OS=Arabidopsis thaliana GN=AT59 PE=2 SV=1) HSP 1 Score: 247.669 bits (631), Expect = 6.029e-65 Identity = 111/191 (58.12%), Postives = 145/191 (75.92%), Query Frame = 3 Query: 216 CGTGNPIDDCWRCDPKWEENRQQLADCAIGFGKQAIGGKDGKIYVVTDSGDDDPVNPKPGTLRYAVIQDEPLWIIFARDMVITLKEELIMNSFKTIDGRGASVHIAGGPCITIQYVTNIIIHGINIHDCKRGGNANVRDSPSHYGWRTISDGDGVSIFGGSHVWVDHCSLSNCNDGLIDAIHGSTAITISN 788 C NPID+CWRCD W NR++LADC +GFG++ GGKDG IYVV D+ D+D +NPKPGTLR+AV +D PLWIIFAR M+I L++EL++ S KTIDGRGA V+I G +T+Q+V N+IIH I + G +RDS +H G RT SDGDG+S+FG +++W+DH S++ C DG+IDAI GSTA+TISN Sbjct: 101 CLAYNPIDNCWRCDRNWANNRKKLADCVLGFGRRTTGGKDGPIYVVKDASDNDLINPKPGTLRHAVTRDGPLWIIFARSMIIKLQQELMITSDKTIDGRGARVYIMEGAGLTLQFVNNVIIHNIYVKHIVPGNGGLIRDSEAHIGLRTKSDGDGISLFGATNIWIDHVSMTRCADGMIDAIDGSTAVTISN 291
BLAST of CK933958 vs. ExPASy Swiss-Prot
Match: PEL21_ARATH (Putative pectate lyase 21 OS=Arabidopsis thaliana GN=At5g55720 PE=2 SV=1) HSP 1 Score: 245.358 bits (625), Expect = 2.775e-64 Identity = 118/196 (60.20%), Postives = 146/196 (74.49%), Query Frame = 3 Query: 213 SCGT-GNPIDDCWRCDPKWEENRQQLADCAIGFGKQAIGGKDGKIYVVTDSGDDDPVNPKPGTLRYAVIQDEPLWIIFARDMVITLKEELIMNSFKTIDGRGASVHIAGGPCITIQYVTNIIIHGINIHDC---KRGGNANVRDSPSHYGWRTISDGDGVSIFGGSHVWVDHCSLSNCNDGLIDAIHGSTAITISN 788 SC GNPID+CWRCD W++NR+ LADCA+GFG+ +IGG+ G+ Y VTDSGDD+P+NP PGTLRYA QD+PLWIIF RDMVI LK++L + S+KTIDGRG +V IA GPC+T+ V+NIII+ + IHDC KR N S Y SDGDG+SIF +W+DHC+L C DGLIDA++GST ITISN Sbjct: 43 SCSANGNPIDECWRCDENWKDNRKNLADCAVGFGRDSIGGRAGEFYTVTDSGDDNPLNPTPGTLRYAATQDQPLWIIFDRDMVIQLKQDLQVASYKTIDGRGNNVQIAYGPCLTLYKVSNIIINNLYIHDCVPVKR----NALSSLGGY-----SDGDGISIFESRDIWIDHCTLEKCYDGLIDAVNGSTDITISN 229 HSP 2 Score: 21.9422 bits (45), Expect = 2.775e-64 Identity = 8/12 (66.67%), Postives = 11/12 (91.67%), Query Frame = 1 Query: 790 NYMTHHNKVMLL 825 +YM +HN+VMLL Sbjct: 230 SYMLNHNEVMLL 241
BLAST of CK933958 vs. ExPASy Swiss-Prot
Match: PEL4_ARATH (Probable pectate lyase 4 OS=Arabidopsis thaliana GN=At1g30350 PE=2 SV=1) HSP 1 Score: 236.884 bits (603), Expect = 3.297e-62 Identity = 113/187 (60.43%), Postives = 135/187 (72.19%), Query Frame = 3 Query: 228 NPIDDCWRCDPKWEENRQQLADCAIGFGKQAIGGKDGKIYVVTDSGDDDPVNPKPGTLRYAVIQDEPLWIIFARDMVITLKEELIMNSFKTIDGRGASVHIAGGPCITIQYVTNIIIHGINIHDCKRGGNANVRDSPSHYGWRTISDGDGVSIFGGSHVWVDHCSLSNCNDGLIDAIHGSTAITISN 788 NPID CWR +PKW NRQ LA CA+G+GK AIGGK+G IYVVT+ D+ P P PGTLRYAV Q +PLWI FARDMVI LK +L++NS+KTIDGRGA V IA GPC+ I+ V ++IIHGI+IHDCK N DGDG+ +F +HVW+DHC LS C+DGLID I STA+TISN Sbjct: 36 NPIDACWRRNPKWATNRQALAHCAVGYGKAAIGGKNGPIYVVTNPSDN-PTRPSPGTLRYAVSQPKPLWITFARDMVIVLKSQLMINSYKTIDGRGAKVEIANGPCLRIRQVKHVIIHGISIHDCKADPNG--------------MDGDGIRVFQSTHVWIDHCFLSRCHDGLIDVIVSSTAVTISN 207 HSP 2 Score: 23.483 bits (49), Expect = 3.297e-62 Identity = 9/12 (75.00%), Postives = 10/12 (83.33%), Query Frame = 1 Query: 790 NYMTHHNKVMLL 825 NY T H+KVMLL Sbjct: 208 NYFTQHDKVMLL 219
BLAST of CK933958 vs. ExPASy Swiss-Prot
Match: PEL_TOBAC (Pectate lyase OS=Nicotiana tabacum PE=2 SV=1) HSP 1 Score: 233.417 bits (594), Expect = 1.177e-60 Identity = 112/191 (58.64%), Postives = 133/191 (69.63%), Query Frame = 3 Query: 216 CGTGNPIDDCWRCDPKWEENRQQLADCAIGFGKQAIGGKDGKIYVVTDSGDDDPVNPKPGTLRYAVIQDEPLWIIFARDMVITLKEELIMNSFKTIDGRGASVHIAGGPCITIQYVTNIIIHGINIHDCKRGGNANVRDSPSHYGWRTISDGDGVSIFGGSHVWVDHCSLSNCNDGLIDAIHGSTAITISN 788 C N ID CWRCDP W ENRQ++ADCA+GFG AIGGK G+IYVVTD+ DDD V+PKPGTLRY VIQ EPLWIIF ++M I L ELI+ S KTIDGRG +VHI G I IQ +NIII + IH+ +R+S H G R +GDG+SIF +W+DH S+S DGLIDA+ ST ITISN Sbjct: 42 CRAENAIDKCWRCDPNWAENRQKMADCALGFGSNAIGGKLGRIYVVTDNSDDDVVDPKPGTLRYGVIQKEPLWIIFGKNMKIKLSRELIVTSNKTIDGRGFNVHIQNGAGIKIQSASNIIISNLRIHNIVPTPGGLLRESEDHVGLRGSDEGDGISIFSSHDIWIDHISMSRATDGLIDAVAASTNITISN 232
BLAST of CK933958 vs. ExPASy Swiss-Prot
Match: PEL56_SOLLC (Probable pectate lyase P56 OS=Solanum lycopersicum GN=LAT56 PE=2 SV=2) HSP 1 Score: 224.172 bits (570), Expect = 7.139e-58 Identity = 113/207 (54.59%), Postives = 137/207 (66.18%), Query Frame = 3 Query: 177 SINASRRNLGFL---SCGTGNPIDDCWRCDPKWEENRQQLADCAIGFGKQAIGGKDGKIYVVTDSGDDDPVNPKPGTLRYAVIQDEPLWIIFARDMVITLKEELIMNSFKTIDGRGASVHIAGGPCITIQYVTNIIIHGINIHDCKRGGNANVRDSPSHYGWRTISDGDGVSIFGGSHVWVDHCSLSNCNDGLIDAIHGSTAITISN 788 +INA RR L C N ID CWRCDP W E+RQ++ADCA+GFG A+GGK G Y+VTD+ DDD V+PKPGTLR+ VIQ PLWI FAR M I L ELI++S KTIDGRG VHIA G I IQ +N+II + IH+ +R+S H G R +GD +SIF +W+DH S+S DGLIDA+ GST ITISN Sbjct: 27 AINAPRRKLTKKYRGPCMAVNSIDKCWRCDPFWAEDRQKMADCALGFGINAMGGKYGPYYIVTDNSDDDVVDPKPGTLRFGVIQKGPLWITFARSMRIRLTRELIVSSNKTIDGRGKYVHIANGAGIKIQSASNVIISNLRIHNIVPTAGGLLRESDDHLGLRGADEGDAISIFNSHDIWIDHISMSRATDGLIDAVAGSTNITISN 233
BLAST of CK933958 vs. ExPASy Swiss-Prot
Match: MPA12_AMBAR (Pollen allergen Amb a 1.2 OS=Ambrosia artemisiifolia PE=1 SV=1) HSP 1 Score: 212.231 bits (539), Expect = 2.807e-54 Identity = 114/220 (51.82%), Postives = 138/220 (62.73%), Query Frame = 3 Query: 135 PVQDPELVVEEVHKSINASRRNLGFLSCGTGNPIDDCWRCDPKWEENRQQLADCAIGFGKQAIGGKDGKIYVVTDSGDDDPVNPKPGTLRYAVIQDEPLWIIFARDMVITLKEELIMNSFKTIDGRGASVHIAGGPCITIQYVTNIIIHGINIHDCK--RGGNANVRDSPSHYGWRTISDGDGVSIFGGSHVWVDHCSLSNCNDGLIDAIHGSTAITISN 788 PV+ E VEE S N +RR+L +C N ID CWRC W NRQ LADCA GF K GGK G +Y VT DDD NPK GTLR+A Q+ PLWIIF R+MVI L +EL++NS KTIDGRG V+I +T+ V NIIIH INIHD K GG D P R SDGD +++ G S +W+DHCSLS +DGL+D GS+ +T+SN Sbjct: 22 PVRSAE-DVEEFLPSANETRRSLK--ACEAHNIIDKCWRCKADWANNRQALADCAQGFAKGTYGGKHGDVYTVTSDKDDDVANPKEGTLRFAAAQNRPLWIIFKRNMVIHLNQELVVNSDKTIDGRGVKVNIVNAG-LTLMNVKNIIIHNINIHDIKVCPGGMIKSNDGPPIL--RQQSDGDAINVAGSSQIWIDHCSLSKASDGLLDITLGSSHVTVSN 235
BLAST of CK933958 vs. ExPASy Swiss-Prot
Match: MPA14_AMBAR (Pollen allergen Amb a 1.4 OS=Ambrosia artemisiifolia PE=1 SV=1) HSP 1 Score: 209.149 bits (531), Expect = 2.376e-53 Identity = 114/218 (52.29%), Postives = 131/218 (60.09%), Query Frame = 3 Query: 147 PELVVEEVHKSINASRRNLGFLSCGTGNPIDDCWRCDPKWEENRQQLADCAIGFGKQAIGGKDGKIYVVTDSGDDDPVNPKPGTLRYAVIQDEPLWIIFARDMVITLKEELIMNSFKTIDGRGASVHIAGGPCITIQYVTNIIIHGINIHD--CKRGGNANVRDSPSHYGWRTISDGDGVSIFGGSHVWVDHCSLSNCNDGLIDAIHGSTAITISNKL 794 P E++ + + ++ +CGT N ID CWR W ENR+ LADCA GF K IGGKDG IY VT DDD NPK GTLR+ Q+ PLWIIFARDMVI L EL +N+ KTIDGRGA V I I V NIIIH I +HD GG D P R SDGD + I GGS +W+DHCSLS DGLIDA HGST T+SN L Sbjct: 22 PVRSAEDLQQILPSANETRSLTTCGTYNIIDGCWRGKADWAENRKALADCAQGFAKGTIGGKDGDIYTVTSELDDDVANPKEGTLRFGAAQNRPLWIIFARDMVIRLDRELAINNDKTIDGRGAKVEIINAG-FAIYNVKNIIIHNIIMHDIVVNPGGLIKSHDGPPVP--RKGSDGDAIGISGGSQIWIDHCSLSKAVDGLIDAKHGSTHFTVSNCL 236 The following BLAST results are available for this feature:
BLAST of CK933958 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 38
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Sequences
The
following sequences are available for this feature:
EST sequence >CK933958 ID=CK933958; Name=CK933958; organism=Citrus sinensis; type=EST; length=827bpback to top |