CK933958

Overview
NameCK933958
Unique NameCK933958
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length827
Libraries
Library NameType
Developing fruit peel at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK933958 vs. ExPASy Swiss-Prot
Match: MPA11_AMBAR (Pollen allergen Amb a 1.1 OS=Ambrosia artemisiifolia PE=1 SV=1)

HSP 1 Score: 208.379 bits (529), Expect = 4.054e-53
Identity = 106/205 (51.71%), Postives = 130/205 (63.41%), Query Frame = 3
Query:  180 INASRRNLGFLSCGTGNPIDDCWRCDPKWEENRQQLADCAIGFGKQAIGGKDGKIYVVTDSGDDDPVNPKPGTLRYAVIQDEPLWIIFARDMVITLKEELIMNSFKTIDGRGASVHIAGGPCITIQYVTNIIIHGINIHDCKRGGNANVRDSPSHYGWRTISDGDGVSIFGGSHVWVDHCSLSNCNDGLIDAIHGSTAITISNKL 794
            +N +RR     + G  N ID CWR    W ENR+ LADCA GFGK  +GGKDG IY VT   DDD  NPK GTLR+   Q+ PLWIIF RDMVI L +E+++NS KTIDGRGA V I      T+  V N+IIH IN+HD K      ++ +      R  SDGD +SI G S +W+DHCSLS   DGL+DA  G+T +T+SN L
Sbjct:   35 VNETRR---LTTSGAYNIIDGCWRGKADWAENRKALADCAQGFGKGTVGGKDGDIYTVTSELDDDVANPKEGTLRFGAAQNRPLWIIFERDMVIRLDKEMVVNSDKTIDGRGAKVEIINAG-FTLNGVKNVIIHNINMHDVKVNPGGLIKSNDGPAAPRAGSDGDAISISGSSQIWIDHCSLSKSVDGLVDAKLGTTRLTVSNSL 235          
BLAST of CK933958 vs. ExPASy Swiss-Prot
Match: MPAA2_AMBAR (Pollen allergen Amb a 2 OS=Ambrosia artemisiifolia PE=1 SV=1)

HSP 1 Score: 206.838 bits (525), Expect = 1.179e-52
Identity = 105/208 (50.48%), Postives = 133/208 (63.94%), Query Frame = 3
Query:  165 EVHKSINASRRNLGFLSCGTGNPIDDCWRCDPKWEENRQQLADCAIGFGKQAIGGKDGKIYVVTDSGDDDPVNPKPGTLRYAVIQDEPLWIIFARDMVITLKEELIMNSFKTIDGRGASVHIAGGPCITIQYVTNIIIHGINIHDCKRGGNANVRDSPSHYGWRTISDGDGVSIFGGSHVWVDHCSLSNCNDGLIDAIHGSTAITISN 788
            ++  S N +RR+L    C   N ID CWRC P W ENRQ L +CA GFGK   GGK G IY+VT   DDD VNPK GTLR+   QD PLWIIF RDM+I L++E+++ S KTIDGRGA V +  G  IT+  V N+IIH I+IHD +      ++ +      R  SDGD + + G S +W+DHC+LS   DGL+D   GST +TISN
Sbjct:   30 DILPSPNDTRRSLQ--GCEAHNIIDKCWRCKPDWAENRQALGNCAQGFGKATHGGKWGDIYMVTSDQDDDVVNPKEGTLRFGATQDRPLWIIFQRDMIIYLQQEMVVTSDKTIDGRGAKVELVYGG-ITLMNVKNVIIHNIDIHDVRVLPGGRIKSNGGPAIPRHQSDGDAIHVTGSSDIWIDHCTLSKSFDGLVDVNWGSTGVTISN 234          
BLAST of CK933958 vs. ExPASy Swiss-Prot
Match: MPA13_AMBAR (Pollen allergen Amb a 1.3 OS=Ambrosia artemisiifolia PE=1 SV=1)

HSP 1 Score: 206.838 bits (525), Expect = 1.179e-52
Identity = 114/220 (51.82%), Postives = 135/220 (61.36%), Query Frame = 3
Query:  135 PVQDPELVVEEVHKSINASRRNLGFLSCGTGNPIDDCWRCDPKWEENRQQLADCAIGFGKQAIGGKDGKIYVVTDSGDDDPVNPKPGTLRYAVIQDEPLWIIFARDMVITLKEELIMNSFKTIDGRGASVHIAGGPCITIQYVTNIIIHGINIHDCK--RGGNANVRDSPSHYGWRTISDGDGVSIFGGSHVWVDHCSLSNCNDGLIDAIHGSTAITISN 788
            PV+  E  V E+  S+N +R      +C   N ID CWR    WE NRQ LADCA GF K   GGK G +Y VT + DDD  NPK GTLR+A  Q+ PLWIIF  DMVI L +EL++NS KTIDGRG  V I  G  +T+  V NIIIH INIHD K   GG     D P     R  SDGD +++ G S +W+DHCSLS   DGL+D   GST +TISN
Sbjct:   22 PVRSAE-GVGEILPSVNETR---SLQACEALNIIDKCWRGKADWENNRQALADCAQGFAKGTYGGKWGDVYTVTSNLDDDVANPKEGTLRFAAAQNRPLWIIFKNDMVINLNQELVVNSDKTIDGRGVKVEIINGG-LTLMNVKNIIIHNINIHDVKVLPGGMIKSNDGPPIL--RQASDGDTINVAGSSQIWIDHCSLSKSFDGLVDVTLGSTHVTISN 234          
BLAST of CK933958 vs. ExPASy Swiss-Prot
Match: SBP_CRYJA (Sugi basic protein OS=Cryptomeria japonica PE=1 SV=2)

HSP 1 Score: 203.371 bits (516), Expect = 1.304e-51
Identity = 98/199 (49.25%), Postives = 134/199 (67.34%), Query Frame = 3
Query:  213 SCGTGNPIDDCWRCDPKWEENRQQLADCAIGFGKQAIGGKDGKIYVVTDSGDDDPVNPKPGTLRYAVIQDEPLWIIFARDMVITLKEELIMNSFKTIDGRGASVHIA-GGPCITIQYVTNIIIHGINIHDCKRG--GNANVRDSPSHYGWRTI--SDGDGVSIFGGSHVWVDHCSLSNCNDGLIDAIHGSTAITISNKL 794
            SC + NPID CWR D  W +NR +LADCA+GFG   +GGK G +Y VT+S DDDPVNP PGTLRY   +D PLWIIF+ +M I LK  + +  +KT DGRGA V+I  GGPC+ I+ V+N+IIHG++++ C     GN  + +S   +G   +   DGD +++   +++W+DH S SN +DGL+D    ST +TISN L
Sbjct:   18 SCFSDNPIDSCWRGDSNWAQNRMKLADCAVGFGSSTMGGKGGDLYTVTNS-DDDPVNPAPGTLRYGATRDRPLWIIFSGNMNIKLKMPMYIAGYKTFDGRGAQVYIGNGGPCVFIKRVSNVIIHGLHLYGCSTSVLGNVLINES---FGVEPVHPQDGDALTLRTATNIWIDHNSFSNSSDGLVDVTLSSTGVTISNNL 212          
BLAST of CK933958 vs. ExPASy Swiss-Prot
Match: MPAJ1_JUNVI (Major pollen allergen Jun v 1 OS=Juniperus virginiana PE=1 SV=1)

HSP 1 Score: 200.29 bits (508), Expect = 1.104e-50
Identity = 100/200 (50.00%), Postives = 134/200 (67.00%), Query Frame = 3
Query:  210 LSCGTGNPIDDCWRCDPKWEENRQQLADCAIGFGKQAIGGKDGKIYVVTDSGDDDPVNPKPGTLRYAVIQDEPLWIIFARDMVITLKEELIMNSFKTIDGRGASVHIA-GGPCITIQYVTNIIIHGINIHDCKRG--GNANVRDS----PSHYGWRTISDGDGVSIFGGSHVWVDHCSLSNCNDGLIDAIHGSTAITISN 788
            +SC + NPID CWR D  W +NR +LADCA+GFG   +GGK G  Y VT S DD+PVNP PGTLRY   +++ LWIIF+++M I LK  L +   KTIDGRGA VH+  GGPC+ ++ V+++I+HG++IH C     G+  V +S    P H       DGD +++   ++ W+DH SLS+C+DGLID   GST ITISN
Sbjct:   17 VSCCSDNPIDSCWRGDSNWGQNRMKLADCAVGFGSSTMGGKGGDFYTVT-SADDNPVNPTPGTLRYGATREKTLWIIFSQNMNIKLKMPLYVAGHKTIDGRGADVHLGNGGPCLFMRKVSHVILHGLHIHGCNTSVLGDVLVSESIGVVPVH-----AQDGDAITMRNVTNAWIDHNSLSDCSDGLIDVTLGSTGITISN 210          
BLAST of CK933958 vs. ExPASy Swiss-Prot
Match: MPAC1_CHAOB (Major pollen allergen Cha o 1 OS=Chamaecyparis obtusa PE=1 SV=1)

HSP 1 Score: 199.904 bits (507), Expect = 1.442e-50
Identity = 99/200 (49.50%), Postives = 131/200 (65.50%), Query Frame = 3
Query:  210 LSCGTGNPIDDCWRCDPKWEENRQQLADCAIGFGKQAIGGKDGKIYVVTDSGDDDPVNPKPGTLRYAVIQDEPLWIIFARDMVITLKEELIMNSFKTIDGRGASVHIA-GGPCITIQYVTNIIIHGINIHDCKRGGNANVRDS------PSHYGWRTISDGDGVSIFGGSHVWVDHCSLSNCNDGLIDAIHGSTAITISN 788
            +SC + NPID CWR D  W++NR +LADCA+GFG  A+GGK G  Y VT S DDDPVNP PGTLRY   ++  LWIIF++++ I L   L +   KTIDGRGA VHI  GGPC+ ++ V+++I+HG+NIH C    + NV  S      P H       DGD +++   + VW+DH SLS+ +DGL+D    ST +TISN
Sbjct:   17 VSCFSDNPIDSCWRGDANWDQNRMKLADCAVGFGSSAMGGKGGAFYTVT-SSDDDPVNPAPGTLRYGATRERSLWIIFSKNLNIKLNMPLYIAGNKTIDGRGAEVHIGNGGPCLFMRTVSHVILHGLNIHGCNTSVSGNVLISEASGVVPVH-----AQDGDAITMRNVTDVWIDHNSLSDSSDGLVDVTLASTGVTISN 210          
BLAST of CK933958 vs. ExPASy Swiss-Prot
Match: MPAJ1_JUNAS (Major pollen allergen Jun a 1 OS=Juniperus ashei PE=1 SV=1)

HSP 1 Score: 198.749 bits (504), Expect = 3.212e-50
Identity = 99/200 (49.50%), Postives = 134/200 (67.00%), Query Frame = 3
Query:  210 LSCGTGNPIDDCWRCDPKWEENRQQLADCAIGFGKQAIGGKDGKIYVVTDSGDDDPVNPKPGTLRYAVIQDEPLWIIFARDMVITLKEELIMNSFKTIDGRGASVHIA-GGPCITIQYVTNIIIHGINIHDCKRG--GNANVRDS----PSHYGWRTISDGDGVSIFGGSHVWVDHCSLSNCNDGLIDAIHGSTAITISN 788
            +SC + NPID CWR D  W++NR +LADCA+GFG   +GGK G  Y VT S DD+PVNP PGTLRY   +++ LWIIF+++M I LK  L +   KTIDGRGA VH+  GGPC+ ++ V+++I+H ++IH C     G+  V +S    P H       DGD +++   ++ W+DH SLS+C+DGLID   GST ITISN
Sbjct:   17 VSCYSDNPIDSCWRGDSNWDQNRMKLADCAVGFGSSTMGGKGGDFYTVT-STDDNPVNPTPGTLRYGATREKALWIIFSQNMNIKLKMPLYVAGHKTIDGRGADVHLGNGGPCLFMRKVSHVILHSLHIHGCNTSVLGDVLVSESIGVEPVH-----AQDGDAITMRNVTNAWIDHNSLSDCSDGLIDVTLGSTGITISN 210          
BLAST of CK933958 vs. ExPASy Swiss-Prot
Match: MPAC1_CUPAR (Major pollen allergen Cup a 1 OS=Cupressus arizonica PE=1 SV=1)

HSP 1 Score: 194.512 bits (493), Expect = 6.057e-49
Identity = 95/194 (48.97%), Postives = 132/194 (68.04%), Query Frame = 3
Query:  228 NPIDDCWRCDPKWEENRQQLADCAIGFGKQAIGGKDGKIYVVTDSGDDDPVNPKPGTLRYAVIQDEPLWIIFARDMVITLKEELIMNSFKTIDGRGASVHIA-GGPCITIQYVTNIIIHGINIHDCKRG--GNANVRDS----PSHYGWRTISDGDGVSIFGGSHVWVDHCSLSNCNDGLIDAIHGSTAITISN 788
            NPID CWR D  W++NR +LADC +GFG   +GGK G+IY VT S +D+PVNP PGTLRY   +++ LWIIF+++M I L+  L +  +KTIDGRGA VH+  GGPC+ ++  +++I+HG++IH C     G+  V +S    P H       DGD +++   ++ W+DH SLS+C+DGLID   GST ITISN
Sbjct:    2 NPIDSCWRGDSNWDQNRMKLADCVVGFGSSTMGGKGGEIYTVTSS-EDNPVNPTPGTLRYGATREKALWIIFSQNMNIKLQMPLYVAGYKTIDGRGAVVHLGNGGPCLFMRKASHVILHGLHIHGCNTSVLGDVLVSESIGVEPVH-----AQDGDAITMRNVTNAWIDHNSLSDCSDGLIDVTLGSTGITISN 189          
The following BLAST results are available for this feature:
BLAST of CK933958 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 38
Match NameE-valueIdentityDescription
MPA11_AMBAR4.054e-5351.71Pollen allergen Amb a 1.1 OS=Ambrosia artemisiifol... [more]
MPAA2_AMBAR1.179e-5250.48Pollen allergen Amb a 2 OS=Ambrosia artemisiifolia... [more]
MPA13_AMBAR1.179e-5251.82Pollen allergen Amb a 1.3 OS=Ambrosia artemisiifol... [more]
SBP_CRYJA1.304e-5149.25Sugi basic protein OS=Cryptomeria japonica PE=1 SV... [more]
MPAJ1_JUNVI1.104e-5050.00Major pollen allergen Jun v 1 OS=Juniperus virgini... [more]
MPAC1_CHAOB1.442e-5049.50Major pollen allergen Cha o 1 OS=Chamaecyparis obt... [more]
MPAJ1_JUNAS3.212e-5049.50Major pollen allergen Jun a 1 OS=Juniperus ashei P... [more]
MPAC1_CUPAR6.057e-4948.97Major pollen allergen Cup a 1 OS=Cupressus arizoni... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004543_B05 Developing fruit peel at 38 DAFB Citrus sinensis cDNA clone P38DAB10003_IIF_B05 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK933958 ID=CK933958; Name=CK933958; organism=Citrus sinensis; type=EST; length=827bp
GGGGACTCCACTCTCCCCTTTACTTCATTTTCTTTCCTAGCAGAGAGAAA
GTGAGAGAGATTGAACAAATGGCAATTCCACTCTTGCTTTGGTTGCTCTT
GTGCCTTTTAGCTCCAACCTTCATTTCCTCTTCACCAGTTCAAGATCCTG
AATTAGTAGTGGAAGAAGTACACAAAAGCATCAATGCGTCTAGGAGGAAT
TTGGGGTTTCTGTCGTGTGGGACCGGCAATCCGATCGACGACTGCTGGCG
GTGTGACCCGAAGTGGGAAGAGAACCGGCAGCAGCTAGCGGATTGCGCCA
TCGGGTTCGGCAAGCAGGCCATTGGTGGGAAAGATGGTAAGATATATGTT
GTTACGGACTCCGGTGACGATGACCCAGTGAACCCAAAGCCAGGCACTCT
GAGGTATGCTGTGATCCAAGACGAGCCCCTATGGATCATTTTCGCACGTG
ACATGGTGATCACATTGAAAGAGGAGTTGATCATGAACTCGTTCAAGACC
ATCGACGGCCGAGGAGCGAGCGTACACATAGCCGGTGGTCCATGCATTAC
TATCCAGTACGTGACCAACATCATTATTCATGGGATTAATATACATGACT
GTAAGAGAGGAGGCAACGCTAACGTGCGGGACTCACCAAGTCACTACGGG
TGGAGGACTATATCGGACGGCGATGGTGTATCCATCTTTGGTGGAAGCCA
CGTGTGGGTTGATCATTGCTCTTTGTCTAATTGCAACGATGGGTTGATCG
ATGCCATTCATGGATCCACAGCCATCACAATCTCAAACAAATTACATGAC
CCACCATAACAAAGTGATGCTTCTGGG
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