CK933966
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CK933966 vs. ExPASy Swiss-Prot
Match: CB4B_SOLLC (Chlorophyll a-b binding protein CP24 10B, chloroplastic OS=Solanum lycopersicum GN=CAP10B PE=3 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 3.406e-12 Identity = 60/204 (29.41%), Postives = 81/204 (39.71%), Query Frame = 1 Query: 259 PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGFVEGYR---------------------IXXXXXXXXXXXXXXXXAFDPLGLA---------DDPDQFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPI 780 P +L G PGD+G+D GL DP RE E+IH RWAM LG G + WF+AGA +P I S ++ Q++LMG+VE R FDPL LA D ++ LK+ E+K+ RLAM +M F+ +A GK P+ Sbjct: 68 PEWLDGSLPGDFGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVLGIFV-------GQAWSGIPWFEAGA------------DPGAIAPFSFGSLLGTQLLLMGWVESKRWVDFFDNDSQSIDWATPWSKTAENFANFTGEQGYPGGKFFDPLALAGTLNNGVYVPDTEKLERLKLAEIKHSRLAMLAMLIFYFEA-GQGKTPL 251
BLAST of CK933966 vs. ExPASy Swiss-Prot
Match: CB29_CHLRE (Chlorophyll a-b binding protein CP29 OS=Chlamydomonas reinhardtii GN=Lhcb4 PE=1 SV=3) HSP 1 Score: 72.0182 bits (175), Expect = 4.449e-12 Identity = 70/223 (31.39%), Postives = 90/223 (40.36%), Query Frame = 1 Query: 259 PSYLTGEFPGDYGWDTAGLSADPE-----------TFAKN----------------------------------RELEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGFVEGYRIXXXXXXXXXXXXXXXXAFDPLGLADDPDQFA-ELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENL 789 P +L G PGD G+D GLS E AKN RE E+IH RWAML LG + E + GV W +AG G Y G L SI + +V+L+G E YR FDPL LA + ++ A LK E+K+ RLAM S FG+ VQA+ TG+G + +L Sbjct: 60 PEWLDGSLPGDRGFDPLGLSKPSEFVVIGVDENDQNAAKNNKGSVEAIVQATPDEVSSENRLAPYSEVFGLARFRECELIHGRWAMLACLGALVAE--ATTGVS-----WVEAGKVELD--GASYAG---LSLPFSITQLIWIEVILVGGAEFYR---NSETNPEKRCYPGGVFDPLKLASEDEERAFRLKTAEIKHARLAMVSFFGYGVQALSTGEGALGSL 267 The following BLAST results are available for this feature:
BLAST of CK933966 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 82
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Sequences
The
following sequences are available for this feature:
EST sequence >CK933966 ID=CK933966; Name=CK933966; organism=Citrus sinensis; type=EST; length=816bpback to top |