CK933970
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK933970 vs. ExPASy Swiss-Prot
Match: RGP2_ORYSJ (Ras-related protein RGP2 OS=Oryza sativa subsp. japonica GN=RGP2 PE=2 SV=2) HSP 1 Score: 134.035 bits (336), Expect = 7.866e-31 Identity = 71/165 (43.03%), Postives = 106/165 (64.24%), Query Frame = 1 Query: 157 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCI 651 L K++++GDSGVGK+++++++ FS K+TIG +F TK +Q E + QIWDTAGQER++++ A+YRGA +LVYD+ +SFDN++ W E A S +++GNK D+ + R VSE + +A A K + + ETSA E +NVEEAFQ I Sbjct: 12 LFKMVLIGDSGVGKSNILSRFTRNHFSLDSKSTIGVEFATKSLQMEGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQSFDNVHRWLRELRDHADSS----IVIMMVGNKSDLI--HLRAVSEDEGKA-LAEKEGLFFLETSAMEAVNVEEAFQTI 169
BLAST of CK933970 vs. ExPASy Swiss-Prot
Match: RAB13_RAT (Ras-related protein Rab-13 OS=Rattus norvegicus GN=Rab13 PE=2 SV=2) HSP 1 Score: 134.035 bits (336), Expect = 7.866e-31 Identity = 71/170 (41.76%), Postives = 106/170 (62.35%), Query Frame = 1 Query: 157 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAXNAL 666 L K++++GDSGVGKT L+ ++ F++ Y +TIG DF + V+ E + LQ+WDTAGQERF+++ A+YRGA +LVYD+ KSF+N+ NW + AS ++LGNK D++ R V ++A A + I +FETSAK +NV+EAF +A + L Sbjct: 8 LFKLLLIGDSGVGKTCLIIRFAEDNFNSTYISTIGIDFKIRTVEIEGKRIKLQVWDTAGQERFKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSIKENASA----GVERLLLGNKCDMEA--KRKVQREQAER-LAREHRIRFFETSAKSSVNVDEAFSSLARDIL 170
BLAST of CK933970 vs. ExPASy Swiss-Prot
Match: RB27B_RAT (Ras-related protein Rab-27B OS=Rattus norvegicus GN=Rab27b PE=2 SV=3) HSP 1 Score: 133.65 bits (335), Expect = 1.027e-30 Identity = 80/203 (39.41%), Postives = 123/203 (60.59%), Query Frame = 1 Query: 157 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDR----------LFTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAXNALKSGEE--EEXXLPDTIDVGNSSQ 729 L+K++ LGDSGVGKT+ + +Y + KF+ ++ T+G DF K V ++ + LQ+WDTAGQERF+SL AF+R A +L++D+ S +SF N+ NW + A +PD V++GNK D+ + R V+E++AR A K IPYFETSA G NVE++ + + +K E+ E+ +PDT++ NS + Sbjct: 9 LIKLLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYDTQGADGSSGKAFKVHLQLWDTAGQERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVRNWMSQLQANAYCENPD---IVLIGNKADL--LDQREVNERQARE-LAEKYGIPYFETSAATGQNVEKSVETLLDLIMKRMEKCVEKTQVPDTVNGVNSGK 205
BLAST of CK933970 vs. ExPASy Swiss-Prot
Match: RAB13_MOUSE (Ras-related protein Rab-13 OS=Mus musculus GN=Rab13 PE=2 SV=1) HSP 1 Score: 133.265 bits (334), Expect = 1.342e-30 Identity = 71/170 (41.76%), Postives = 105/170 (61.76%), Query Frame = 1 Query: 157 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAXNAL 666 L K++++GDSGVGKT L+ ++ F++ Y +TIG DF + V E + LQ+WDTAGQERF+++ A+YRGA +LVYD+ KSF+N+ NW + AS ++LGNK D++ R V ++A A + I +FETSAK +NV+EAF +A + L Sbjct: 8 LFKLLLIGDSGVGKTCLIIRFAEDNFNSTYISTIGIDFKIRTVDIEGKRIKLQVWDTAGQERFKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSIKENASA----GVERLLLGNKCDMEA--KRQVQREQAEK-LAREHRIRFFETSAKSSVNVDEAFSSLARDIL 170
BLAST of CK933970 vs. ExPASy Swiss-Prot
Match: RAB2B_DICDI (Ras-related protein Rab-2B OS=Dictyostelium discoideum GN=rab2B PE=3 SV=1) HSP 1 Score: 132.494 bits (332), Expect = 2.289e-30 Identity = 72/180 (40.00%), Postives = 110/180 (61.11%), Query Frame = 1 Query: 157 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAXNALKSGEEEEXXL 696 L K I++GDS VGK++L+ Q+V+K+F+ TIG +F ++ + D+ LQIWDTAGQE+F+S+ A+YRGA C ++VYD+ SF++LN+W L + V++GNK D++ +R VS +A+ + A K + +FETSAK +NV+EAF+ LK E L Sbjct: 24 LFKYIMVGDSAVGKSNLLLQFVDKRFAPNSDFTIGVEFGSRSININDKQIKLQIWDTAGQEKFRSITRAYYRGAVCAMIVYDITRRDSFESLNSW----LTDCRKFSSCDVTTVLIGNKADLEA--NRQVSTSEAKEF-AEKNGLMFFETSAKTALNVDEAFEKSTEQILKKLESNPGLL 196
BLAST of CK933970 vs. ExPASy Swiss-Prot
Match: ARA3_ARATH (Ras-related protein ARA-3 OS=Arabidopsis thaliana GN=ARA-3 PE=2 SV=1) HSP 1 Score: 131.724 bits (330), Expect = 3.904e-30 Identity = 77/202 (38.12%), Postives = 117/202 (57.92%), Query Frame = 1 Query: 139 PSRRRT----LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAXN-ALKSGEEEEXXLPDTIDVGNSSQ 729 P+R R L+K++++GDSGVGK+ L+ ++ + F+ + TIG DF + ++ + + LQIWDTAGQERF+++ A+YRGA +LVYDV SF+N+ NW AS DN +++GNK D+D + R V K +A A + I +FETSAK +NVEE F I + + + + P TI + + Q Sbjct: 5 PARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHAS----DNVNKILVGNKADMD-ESKRAVPTAKGQA-LADEYGIKFFETSAKTNLNVEEVFFSIGRDIKQRLSDTDSRAEPATIKISQTDQ 200
BLAST of CK933970 vs. ExPASy Swiss-Prot
Match: RB1BV_BETVU (Ras-related protein RAB1BV OS=Beta vulgaris GN=RAB1BV PE=2 SV=1) HSP 1 Score: 131.339 bits (329), Expect = 5.099e-30 Identity = 74/176 (42.05%), Postives = 108/176 (61.36%), Query Frame = 1 Query: 139 PSRRRT----LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIA 654 P+R R L+K++++GDSGVGK+ L+ ++ + F+ + TIG DF + ++ + + LQIWDTAGQERF+++ A+YRGA +LVYDV SF+N+ NW AS DN +++GNK D+D + R V K +A A + I +FETSAK +NVEE F IA Sbjct: 5 PARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHAS----DNVNKILVGNKADMD-ESKRAVPTAKGQA-LADEYGIKFFETSAKTNLNVEEVFFSIA 174
BLAST of CK933970 vs. ExPASy Swiss-Prot
Match: RAB1C_DICDI (Ras-related protein Rab-1C OS=Dictyostelium discoideum GN=Rab1C PE=2 SV=1) HSP 1 Score: 131.339 bits (329), Expect = 5.099e-30 Identity = 69/172 (40.12%), Postives = 113/172 (65.70%), Query Frame = 1 Query: 157 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAXNALKS 672 LLK++++GDSGVGK+ ++ ++ + +F++ Y +TIG DF + ++ + + LQIWDTAGQERF+++ ++YRGA ++VYD+ SM SF+++ W + ASPS +++GNK D++ + R V K A+ + A + NIP ETSAKE ++EAF +A + KS Sbjct: 33 LLKILVIGDSGVGKSCMLLRFADNRFTDSYISTIGVDFCIRTIELDGKKIKLQIWDTAGQERFKTITTSYYRGAHGLIIVYDITSMDSFNSIKRWLIDVDRFASPS----VLKLIVGNKCDLN--SKRAVDFKIAKKF-ADELNIPIMETSAKESTAIDEAFIKLASDIKKS 197
BLAST of CK933970 vs. ExPASy Swiss-Prot
Match: RYL1_YARLI (Ras-like GTP-binding protein RYL1 OS=Yarrowia lipolytica GN=RYL1 PE=3 SV=1) HSP 1 Score: 130.568 bits (327), Expect = 8.697e-30 Identity = 68/166 (40.96%), Postives = 105/166 (63.25%), Query Frame = 1 Query: 157 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIA 654 L+K++++GDSGVGK+ L+ ++ +F+ + TIG DF + + ++ LQ+WDTAGQERF+++ A+YRGA +LVYDV KSF+N+ NW + A+ + +++GNK D+D RVVS ++ +A A K IP+ E S+K INVEE F +A Sbjct: 11 LIKLLLIGDSGVGKSCLLLRFCEDQFTPSFITTIGIDFKIRTIDIGNQRVKLQVWDTAGQERFRTITTAYYRGAMGILLVYDVTDEKSFNNIENWYQNVQSYAN----EGVELILVGNKCDLD--EKRVVSTEQGQA-LADKFGIPFLEASSKTNINVEECFYSVA 169
BLAST of CK933970 vs. ExPASy Swiss-Prot
Match: YPTM1_MAIZE (GTP-binding protein YPTM1 OS=Zea mays GN=YPTM1 PE=2 SV=2) HSP 1 Score: 130.183 bits (326), Expect = 1.136e-29 Identity = 69/172 (40.12%), Postives = 108/172 (62.79%), Query Frame = 1 Query: 157 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAXNALKS 672 L K++++GDS VGK+ + ++ + + + Y +TIG DF + V+ E + LQIWDTAGQERF+++ ++YRGA ++VYD+ M+SF+N+ W +E A+ D+ +++GNK D+ +R V A+A+ G IP+ ETSAKE INVEEAF ++ KS Sbjct: 8 LFKLLLIGDSSVGKSCFLLRFADDSYVDSYISTIGVDFKIRTVEVEGKTVKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDITDMESFNNVKQWLDEIDRYAN----DSVRKLLVGNKCDL--AENRAVDTSVAQAYAQEVG-IPFLETSAKESINVEEAFLAMSAAIKKS 172 The following BLAST results are available for this feature:
BLAST of CK933970 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CK933970 ID=CK933970; Name=CK933970; organism=Citrus sinensis; type=EST; length=729bpback to top |