CK933970
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK933970 vs. ExPASy Swiss-Prot
Match: RIC1_ORYSJ (Ras-related protein RIC1 OS=Oryza sativa subsp. japonica GN=RIC1 PE=2 SV=2) HSP 1 Score: 127.102 bits (318), Expect = 9.616e-29 Identity = 68/166 (40.96%), Postives = 106/166 (63.86%), Query Frame = 1 Query: 157 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIA 654 L K++++GDSGVGK+ L+ ++ + + Y +TIG DF + V+ + + LQIWDTAGQERF+++ ++YRGA ++VYDV +SF+N+ W E AS +N +++GNK D+ +RVVS + +A A + IP+ ETSAK+ NVE+AF +A Sbjct: 8 LFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYAS----ENVNKLLVGNKCDL--AENRVVSYEAGKA-LADEIGIPFLETSAKDATNVEKAFMTMA 166
BLAST of CK933970 vs. ExPASy Swiss-Prot
Match: RB27A_MOUSE (Ras-related protein Rab-27A OS=Mus musculus GN=Rab27a PE=1 SV=1) HSP 1 Score: 127.102 bits (318), Expect = 9.616e-29 Identity = 74/184 (40.22%), Postives = 109/184 (59.24%), Query Frame = 1 Query: 157 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFE----------DRLFTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAXNALKSGE 678 L+K + LGDSGVGKTS++ QY + KF++++ T+G DF K V + + LQ+WDTAGQERF+SL AF+R A +L++D+ + +SF N+ NW + + A +PD V+ GNK D++ + R V E++AR A K IPYFETSA G N+ A + + +K E Sbjct: 9 LIKFLALGDSGVGKTSVLYQYTDGKFNSKFITTVGIDFREKRVVYRANGPDGAVGRGQRIHLQLWDTAGQERFRSLTTAFFRDAMGFLLLFDLTNEQSFLNVRNWISQLQMHAYCENPD---IVLCGNKSDLE--DQRAVKEEEARE-LAEKYGIPYFETSAANGTNISHAIEMLLDLIMKRME 186
BLAST of CK933970 vs. ExPASy Swiss-Prot
Match: RAB8A_CHICK (Ras-related protein Rab-8A OS=Gallus gallus GN=RAB8A PE=2 SV=1) HSP 1 Score: 127.102 bits (318), Expect = 9.616e-29 Identity = 69/166 (41.57%), Postives = 103/166 (62.05%), Query Frame = 1 Query: 157 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIA 654 L K++++GDSGVGKT + ++ F+ + +TIG DF + ++ + + LQIWDTAGQERF+++ A+YRGA +LVYD+ + KSF+N+ NW ASP + ++LGNK D + + R VS ++ AS G I + ETSAK IN+E AF +A Sbjct: 8 LFKLLLIGDSGVGKTCALFRFSEDAFNATFISTIGIDFKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFENIRNWVRNIEEHASP----DVEKMILGNKCDAN--DKRQVSREQGEKLAASFG-IKFMETSAKANINIENAFFTLA 166
BLAST of CK933970 vs. ExPASy Swiss-Prot
Match: RAB8A_PONAB (Ras-related protein Rab-8A OS=Pongo abelii GN=RAB8A PE=2 SV=1) HSP 1 Score: 126.716 bits (317), Expect = 1.256e-28 Identity = 70/166 (42.17%), Postives = 106/166 (63.86%), Query Frame = 1 Query: 157 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIA 654 L K++++GDSGVGKT ++ ++ F++ + +TIG DF + ++ + + LQIWDTAGQERF+++ A+YRGA +LVYD+ + KSFDN+ NW AS +D + ++LGNK DV+ + R VS+++ G I + ETSAK INVE AF +A Sbjct: 8 LFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIRNWIRNIEEHAS-ADVEK---MILGNKRDVN--DKRQVSKERGEKLALDYG-IKFMETSAKANINVENAFFTLA 166
BLAST of CK933970 vs. ExPASy Swiss-Prot
Match: RAB1_THEPA (Ras-related protein Rab-1 OS=Theileria parva GN=rab1 PE=1 SV=1) HSP 1 Score: 126.716 bits (317), Expect = 1.256e-28 Identity = 74/171 (43.27%), Postives = 105/171 (61.40%), Query Frame = 1 Query: 157 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAXNALK 669 L K+I++GDSG GK+SL+ ++ + +S Y +TIG DF K V+ ++ LQIWDTAGQERF+++ +YRGA + VYDV + SFD++ E +L N +++GNKID+ SRVVS +A+ A + N+ Y E SAK NVE+AF IA ALK Sbjct: 7 LFKIIVIGDSGTGKSSLLLRFADNTYSESYMSTIGVDFKIKTVKIDNTTIKLQIWDTAGQERFRTITSTYYRGAHGIICVYDVTNKLSFDHIT---ETWLQDIDKYATSNVCKLLIGNKIDL--AESRVVSADEAK-HVAEQNNMNYIEASAKTDSNVEKAFTTIA-KALK 170
BLAST of CK933970 vs. ExPASy Swiss-Prot
Match: RB11C_LOTJA (Ras-related protein Rab11C OS=Lotus japonicus GN=RAB11C PE=2 SV=1) HSP 1 Score: 126.331 bits (316), Expect = 1.640e-28 Identity = 65/165 (39.39%), Postives = 103/165 (62.42%), Query Frame = 1 Query: 157 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCI 651 L K++++GDSGVGK+++++++ +F + K+TIG +F T+ +Q E + QIWDTAGQER++++ A+YRGA +LVYD+ ++FDN+ W E A N ++ GNK D++ + R VSE A + K + + ETSA E N+E+AFQ I Sbjct: 12 LFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVQRWLRELRDHAD----SNIVIMMAGNKSDLN--HLRAVSEDDGGA-LSEKEGLSFLETSALEATNIEKAFQTI 169
BLAST of CK933970 vs. ExPASy Swiss-Prot
Match: RAB31_MOUSE (Ras-related protein Rab-31 OS=Mus musculus GN=Rab31 PE=1 SV=1) HSP 1 Score: 126.331 bits (316), Expect = 1.640e-28 Identity = 77/189 (40.74%), Postives = 102/189 (53.97%), Query Frame = 1 Query: 160 LKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAXNALKSGEEEEXXLPDTIDVGNSS 726 LKV +LGD+GVGK+S++ ++V F + TIGA F+TK V + L IWDTAGQERF SL +YRG+ V+VYD+ SF L W +E P+N + GNK D+ + R V K A+ + S G I ETSAK IN+EE FQ I+ G +E I +GN S Sbjct: 6 LKVCLLGDTGVGKSSIVCRFVQDHFDHNISPTIGASFMTKTVPCGNELHKFLIWDTAGQERFHSLAPMYYRGSAAAVIVYDITKQDSFHTLKKWVKEL----KEHGPENIVMAIAGNKCDL--SDIREVPLKDAKEYAESIGAI-VVETSAKNAINIEELFQGISRQIPPLGPQENGN-SGGIKLGNQS 186
BLAST of CK933970 vs. ExPASy Swiss-Prot
Match: RAB1D_DICDI (Ras-related protein Rab-1D OS=Dictyostelium discoideum GN=rab1D PE=1 SV=1) HSP 1 Score: 126.331 bits (316), Expect = 1.640e-28 Identity = 69/190 (36.32%), Postives = 114/190 (60.00%), Query Frame = 1 Query: 163 KVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAXNAL-KSGEEEEXXLPDTIDVGNSSQ 729 K++++GDSGVGK+ L+ ++ + +++ + +TIG DF K + + + LQIWDTAGQERF+++ ++YRGA +LVYD SF N+ W E A +N +++GNK D+ N +VV +A+++ S G IP+ ETSAK NVEE F +A + + + +E PD +D+ + ++ Sbjct: 12 KILLIGDSGVGKSCLLLRFADDSWTDTHISTIGVDFKIKTLNLDGKTIKLQIWDTAGQERFRTITSSYYRGAQGIILVYDCTDQDSFTNVKQWMGEIDRYAC----ENVNKLLVGNKTDL--VNEKVVDSNQAKSFAESYG-IPFIETSAKNATNVEECFISMARDIKNRLADIQETPKPDEVDIKSKNK 194
BLAST of CK933970 vs. ExPASy Swiss-Prot
Match: RAB1B_DICDI (Ras-related protein Rab-1B OS=Dictyostelium discoideum GN=rab1B PE=2 SV=2) HSP 1 Score: 126.331 bits (316), Expect = 1.640e-28 Identity = 66/171 (38.60%), Postives = 104/171 (60.82%), Query Frame = 1 Query: 157 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAXNALK 669 L K++++GDSGVGK+ L+ ++ + ++ Y +TIG DF + + + ++ LQIWDTAGQERF+++ ++YRGA ++VYDV SF+N+ W +E A D+ +++GNK D+ ++V AR + S G IP+ ETSAK NVE+AF +A K Sbjct: 8 LFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTINLDGKIIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDHVSFNNVKQWMQEIQRYAC----DSVTRLLVGNKCDLI--EKKIVDTSTAREYADSVG-IPFLETSAKSSANVEQAFMIMASEIKK 171
BLAST of CK933970 vs. ExPASy Swiss-Prot
Match: RAB1A_RAT (Ras-related protein Rab-1A OS=Rattus norvegicus GN=Rab1A PE=1 SV=3) HSP 1 Score: 126.331 bits (316), Expect = 1.640e-28 Identity = 66/171 (38.60%), Postives = 106/171 (61.99%), Query Frame = 1 Query: 157 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAXNALK 669 L K++++GDSGVGK+ L+ ++ + ++ Y +TIG DF + ++ + + LQIWDTAGQERF+++ ++YRGA ++VYDV +SF+N+ W +E AS +N +++GNK D+ +VV A+ + S G IP+ ETSAK NVE++F +A K Sbjct: 11 LFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYAS----ENVNKLLVGNKCDLT--TKKVVDYTTAKEFADSLG-IPFLETSAKNATNVEQSFMTMAAEIKK 174 The following BLAST results are available for this feature:
BLAST of CK933970 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CK933970 ID=CK933970; Name=CK933970; organism=Citrus sinensis; type=EST; length=729bpback to top |