CK933977

Overview
NameCK933977
Unique NameCK933977
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length877
Libraries
Library NameType
Developing fruit peel at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1647 contig Csv1_Contig1647:1..877. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CK933977 vs. ExPASy Swiss-Prot
Match: CALR_CHLRE (Calreticulin OS=Chlamydomonas reinhardtii PE=2 SV=1)

HSP 1 Score: 303.138 bits (775), Expect = 1.317e-81
Identity = 144/226 (63.72%), Postives = 167/226 (73.89%), Query Frame = 3
Query:  141 FFEERFDDGWESRWVTSDWKKDENTAGEWNYTAGKWNGDPN-DKGIQTSEDYRFYAISAEFPE-FSNKDKTLVFQFSVKHEQKLDCGGGYMKLL--SGEVDQKKFGGDTPYSIMFGPDICGYSTKKVHAILTYNGTNKLIKKEVPCETDQLTHVYTFILRPDATYSILIDNVEKQSGSLYSDWDLLPPKTIKDPDAKKPEDWDDKEYIPDPEDKKPEGYDDIPKEI 806
            +F+E FD  W  RW  S WK  + +AGE+  TAGKW GD   DKGIQT  D +F+AISA     F N  K  V QFSVKHEQ LDCGGGY+K++  + E    +FGGDTPYSIMFGPDICGYST+KVH ILTY G N LIKK++  ETDQLTHVYT +++PD TY +LID  E  SGSLY DWD+LPPKTIKDP A KPEDWD++E I DPEDKKPEG+DDIP  I
Sbjct:   21 YFKETFDGSWADRWTKSSWKVSDGSAGEFKLTAGKWYGDAEADKGIQTGPDSKFFAISAPLATVFDNTGKDTVVQFSVKHEQDLDCGGGYIKVVPATSEKQMGEFGGDTPYSIMFGPDICGYSTRKVHVILTYKGKNYLIKKDIKAETDQLTHVYTLVIKPDNTYQVLIDLKEVASGSLYEDWDMLPPKTIKDPKASKPEDWDEREEIADPEDKKPEGWDDIPATI 246          
BLAST of CK933977 vs. ExPASy Swiss-Prot
Match: CALR_DICDI (Calreticulin OS=Dictyostelium discoideum GN=crtA PE=1 SV=3)

HSP 1 Score: 289.656 bits (740), Expect = 1.507e-77
Identity = 135/224 (60.27%), Postives = 168/224 (75.00%), Query Frame = 3
Query:  138 VFFEERFDDGWESRWVTSDWKKDENTAGEWNYTAGKWNGDPNDKGIQTSEDYRFYAISAEFPEFSNKDKTLVFQFSVKHEQKLDCGGGYMKLLSGEVDQKKFGGDTPYSIMFGPDICGYSTKKVHAILTYNGTNKLIKKEV-PCETDQLTHVYTFILRPDATYSILIDNVEKQSGSLYSDWDLLPPKTIKDPDAKKPEDWDDKEYIPDPEDKKPEGYDDIPKEI 806
            V F++ FD+ WESRWV SDW K++  +G+  +TAGKW GD N KGIQTSED RFYA+SA+FP FSNK K LV Q++VK+EQK+DCGG Y+KLL  ++DQ  F G++ YSIMFGPD+CG ++K+VH IL Y G N LIKKE+   ETDQLTH YT ++ PD TY +L+DN E Q+G+L  DW+LLP K IKDP   KP DW D + I DPED KP G+DDIP  I
Sbjct:   21 VHFKDTFDNDWESRWVVSDWHKEDGKSGKLVHTAGKWFGDENQKGIQTSEDARFYAVSAKFPSFSNKGKDLVLQYTVKNEQKVDCGGSYIKLLPSKLDQSAFDGESEYSIMFGPDVCG-ASKRVHVILNYKGKNHLIKKEINKVETDQLTHQYTLVISPDNTYKVLVDNKEIQAGNLADDWELLPSKQIKDPKQSKPVDWVDVKEIDDPEDVKPAGHDDIPASI 243          
BLAST of CK933977 vs. ExPASy Swiss-Prot
Match: CALR_BOMMO (Calreticulin OS=Bombyx mori GN=crt PE=1 SV=1)

HSP 1 Score: 277.33 bits (708), Expect = 7.739e-74
Identity = 132/219 (60.27%), Postives = 164/219 (74.89%), Query Frame = 3
Query:  138 VFFEERF-DDGWESRWVTSDWKKDENTAGEWNYTAGKWNGDP-NDKGIQTSEDYRFYAISAEFPEFSNKDKTLVFQFSVKHEQKLDCGGGYMKLLSGEVDQKKFGGDTPYSIMFGPDICGYSTKKVHAILTYNGTNKLIKKEVPCETDQLTHVYTFILRPDATYSILIDNVEKQSGSLYSDWDLLPPKTIKDPDAKKPEDWDDKEYIPDPEDKKPEGYD 788
            VFFEE+F DD WES WV S+    E   G++  TAGK+  DP +DKG++TSED RFYA+S +F  FSN+ K LV QF+VKHEQ +DCGGGY+K+   +++QK   G+TPY IMFGPDICG  TKKVH I +Y G N LIKK++ C+ D  TH+YT I++PD TY +LIDN + +SG L +DWD LP K IKDP+AKKPEDWDDK  IPDPEDKKPE +D
Sbjct:   21 VFFEEKFPDDSWESNWVYSEHPGKE--FGKFKLTAGKFFSDPEDDKGLKTSEDARFYALSRKFKPFSNEGKPLVVQFTVKHEQDIDCGGGYLKVFDCKLEQKDMHGETPYEIMFGPDICGPGTKKVHVIFSYKGKNHLIKKDIRCKDDVYTHLYTLIVKPDNTYEVLIDNEKVESGDLEADWDFLPNKKIKDPEAKKPEDWDDKPTIPDPEDKKPEDWD 237          
BLAST of CK933977 vs. ExPASy Swiss-Prot
Match: CALR_CRIGR (Calreticulin OS=Cricetulus griseus GN=CALR PE=2 SV=1)

HSP 1 Score: 268.085 bits (684), Expect = 4.695e-71
Identity = 128/220 (58.18%), Postives = 159/220 (72.27%), Query Frame = 3
Query:  138 VFFEERFDDG--WESRWVTSDWKKDENTAGEWNYTAGKWNGDPN-DKGIQTSEDYRFYAISAEFPEFSNKDKTLVFQFSVKHEQKLDCGGGYMKLLSGEVDQKKFGGDTPYSIMFGPDICGYSTKKVHAILTYNGTNKLIKKEVPCETDQLTHVYTFILRPDATYSILIDNVEKQSGSLYSDWDLLPPKTIKDPDAKKPEDWDDKEYIPDPEDKKPEGYD 788
            V+F+E+F DG  W +RWV S  K D    G++  ++GK+ GD   DKG+QTS+D RFYA+SA F  FSNK +TLV QF+VKHEQ +DCGGGY+KL  G +DQK   GD+ Y+IMFGPDICG  TKKVH I  Y G N LI K++ C+ D+ TH+YT I+RPD TY + IDN + +SGSL  DWD LPPK IKDPDA KPEDWD++  I DP D KPE +D
Sbjct:   21 VYFKEQFLDGDDWTNRWVESKHKSD---FGKFVLSSGKFYGDQEKDKGLQTSQDARFYALSARFEPFSNKGQTLVVQFTVKHEQNIDCGGGYVKLFPGSLDQKDMHGDSEYNIMFGPDICGPGTKKVHVIFNYKGKNVLINKDIRCKDDEFTHLYTLIVRPDNTYEVKIDNSQVESGSLEDDWDFLPPKKIKDPDAAKPEDWDERAKIDDPTDSKPEDWD 237          
BLAST of CK933977 vs. ExPASy Swiss-Prot
Match: CALR_RAT (Calreticulin OS=Rattus norvegicus GN=Calr PE=1 SV=1)

HSP 1 Score: 266.929 bits (681), Expect = 1.046e-70
Identity = 127/220 (57.73%), Postives = 159/220 (72.27%), Query Frame = 3
Query:  138 VFFEERFDDG--WESRWVTSDWKKDENTAGEWNYTAGKWNGDPN-DKGIQTSEDYRFYAISAEFPEFSNKDKTLVFQFSVKHEQKLDCGGGYMKLLSGEVDQKKFGGDTPYSIMFGPDICGYSTKKVHAILTYNGTNKLIKKEVPCETDQLTHVYTFILRPDATYSILIDNVEKQSGSLYSDWDLLPPKTIKDPDAKKPEDWDDKEYIPDPEDKKPEGYD 788
            ++F+E+F DG  W +RWV S  K D    G++  ++GK+ GD   DKG+QTS+D RFYA+SA F  FSNK +TLV QF+VKHEQ +DCGGGY+KL  G +DQK   GD+ Y+IMFGPDICG  TKKVH I  Y G N LI K++ C+ D+ TH+YT I+RPD TY + IDN + +SGSL  DWD LPPK IKDPDA KPEDWD++  I DP D KPE +D
Sbjct:   21 IYFKEQFLDGDAWTNRWVESKHKSD---FGKFVLSSGKFYGDQEKDKGLQTSQDARFYALSARFEPFSNKGQTLVVQFTVKHEQNIDCGGGYVKLFPGGLDQKDMHGDSEYNIMFGPDICGPGTKKVHVIFNYKGKNVLINKDIRCKDDEFTHLYTLIVRPDNTYEVKIDNSQVESGSLEDDWDFLPPKKIKDPDAAKPEDWDERAKIDDPTDSKPEDWD 237          
BLAST of CK933977 vs. ExPASy Swiss-Prot
Match: CALR_MACFU (Calreticulin OS=Macaca fuscata fuscata GN=CALR PE=2 SV=1)

HSP 1 Score: 265.774 bits (678), Expect = 2.330e-70
Identity = 126/220 (57.27%), Postives = 157/220 (71.36%), Query Frame = 3
Query:  138 VFFEERF--DDGWESRWVTSDWKKDENTAGEWNYTAGKWNGDPN-DKGIQTSEDYRFYAISAEFPEFSNKDKTLVFQFSVKHEQKLDCGGGYMKLLSGEVDQKKFGGDTPYSIMFGPDICGYSTKKVHAILTYNGTNKLIKKEVPCETDQLTHVYTFILRPDATYSILIDNVEKQSGSLYSDWDLLPPKTIKDPDAKKPEDWDDKEYIPDPEDKKPEGYD 788
            V+F+E+F   DGW SRW+ S  K D    G++  ++GK+ GD   DKG+QTS+D RFYA+SA F  FSNK +TLV QF+VKHEQ +DCGGGY+KL    +DQ    GD+ Y+IMFGPDICG  TKKVH I  Y G N LI K++ C+ D+ TH+YT I+RPD TY + IDN + +SGSL  DWD LPPK IKDPDA KPEDWD++  I DP D KPE +D
Sbjct:   21 VYFKEQFLDGDGWTSRWIESKHKSD---FGKFVLSSGKFYGDEEKDKGLQTSQDARFYALSASFEPFSNKGQTLVVQFTVKHEQNIDCGGGYVKLFPNSLDQTDMHGDSEYNIMFGPDICGPGTKKVHVIFNYKGKNVLINKDIRCKDDEFTHLYTLIVRPDNTYEVKIDNSQVESGSLEDDWDFLPPKKIKDPDASKPEDWDERAKIDDPTDSKPEDWD 237          
BLAST of CK933977 vs. ExPASy Swiss-Prot
Match: CALR_MACFA (Calreticulin OS=Macaca fascicularis GN=CALR PE=2 SV=1)

HSP 1 Score: 265.774 bits (678), Expect = 2.330e-70
Identity = 126/220 (57.27%), Postives = 157/220 (71.36%), Query Frame = 3
Query:  138 VFFEERF--DDGWESRWVTSDWKKDENTAGEWNYTAGKWNGDPN-DKGIQTSEDYRFYAISAEFPEFSNKDKTLVFQFSVKHEQKLDCGGGYMKLLSGEVDQKKFGGDTPYSIMFGPDICGYSTKKVHAILTYNGTNKLIKKEVPCETDQLTHVYTFILRPDATYSILIDNVEKQSGSLYSDWDLLPPKTIKDPDAKKPEDWDDKEYIPDPEDKKPEGYD 788
            V+F+E+F   DGW SRW+ S  K D    G++  ++GK+ GD   DKG+QTS+D RFYA+SA F  FSNK +TLV QF+VKHEQ +DCGGGY+KL    +DQ    GD+ Y+IMFGPDICG  TKKVH I  Y G N LI K++ C+ D+ TH+YT I+RPD TY + IDN + +SGSL  DWD LPPK IKDPDA KPEDWD++  I DP D KPE +D
Sbjct:   21 VYFKEQFLDGDGWTSRWIESKHKSD---FGKFVLSSGKFYGDEEKDKGLQTSQDARFYALSASFEPFSNKGQTLVVQFTVKHEQNIDCGGGYVKLFPNSLDQTDMHGDSEYNIMFGPDICGPGTKKVHVIFNYKGKNVLINKDIRCKDDEFTHLYTLIVRPDNTYEVKIDNSQVESGSLEDDWDFLPPKKIKDPDASKPEDWDERAKIDDPTDSKPEDWD 237          
BLAST of CK933977 vs. ExPASy Swiss-Prot
Match: CALR_HUMAN (Calreticulin OS=Homo sapiens GN=CALR PE=1 SV=1)

HSP 1 Score: 265.774 bits (678), Expect = 2.330e-70
Identity = 126/220 (57.27%), Postives = 157/220 (71.36%), Query Frame = 3
Query:  138 VFFEERF--DDGWESRWVTSDWKKDENTAGEWNYTAGKWNGDPN-DKGIQTSEDYRFYAISAEFPEFSNKDKTLVFQFSVKHEQKLDCGGGYMKLLSGEVDQKKFGGDTPYSIMFGPDICGYSTKKVHAILTYNGTNKLIKKEVPCETDQLTHVYTFILRPDATYSILIDNVEKQSGSLYSDWDLLPPKTIKDPDAKKPEDWDDKEYIPDPEDKKPEGYD 788
            V+F+E+F   DGW SRW+ S  K D    G++  ++GK+ GD   DKG+QTS+D RFYA+SA F  FSNK +TLV QF+VKHEQ +DCGGGY+KL    +DQ    GD+ Y+IMFGPDICG  TKKVH I  Y G N LI K++ C+ D+ TH+YT I+RPD TY + IDN + +SGSL  DWD LPPK IKDPDA KPEDWD++  I DP D KPE +D
Sbjct:   21 VYFKEQFLDGDGWTSRWIESKHKSD---FGKFVLSSGKFYGDEEKDKGLQTSQDARFYALSASFEPFSNKGQTLVVQFTVKHEQNIDCGGGYVKLFPNSLDQTDMHGDSEYNIMFGPDICGPGTKKVHVIFNYKGKNVLINKDIRCKDDEFTHLYTLIVRPDNTYEVKIDNSQVESGSLEDDWDFLPPKKIKDPDASKPEDWDERAKIDDPTDSKPEDWD 237          
BLAST of CK933977 vs. ExPASy Swiss-Prot
Match: CALR_CERAE (Calreticulin OS=Cercopithecus aethiops GN=CALR PE=2 SV=1)

HSP 1 Score: 265.774 bits (678), Expect = 2.330e-70
Identity = 126/220 (57.27%), Postives = 157/220 (71.36%), Query Frame = 3
Query:  138 VFFEERF--DDGWESRWVTSDWKKDENTAGEWNYTAGKWNGDPN-DKGIQTSEDYRFYAISAEFPEFSNKDKTLVFQFSVKHEQKLDCGGGYMKLLSGEVDQKKFGGDTPYSIMFGPDICGYSTKKVHAILTYNGTNKLIKKEVPCETDQLTHVYTFILRPDATYSILIDNVEKQSGSLYSDWDLLPPKTIKDPDAKKPEDWDDKEYIPDPEDKKPEGYD 788
            V+F+E+F   DGW SRW+ S  K D    G++  ++GK+ GD   DKG+QTS+D RFYA+SA F  FSNK +TLV QF+VKHEQ +DCGGGY+KL    +DQ    GD+ Y+IMFGPDICG  TKKVH I  Y G N LI K++ C+ D+ TH+YT I+RPD TY + IDN + +SGSL  DWD LPPK IKDPDA KPEDWD++  I DP D KPE +D
Sbjct:   21 VYFKEQFLDGDGWTSRWIESKHKSD---FGKFVLSSGKFYGDEEKDKGLQTSQDARFYALSASFEPFSNKGQTLVVQFTVKHEQNIDCGGGYVKLFPNSLDQTDMHGDSEYNIMFGPDICGPGTKKVHVIFNYKGKNVLINKDIRCKDDEFTHLYTLIVRPDNTYEVKIDNSQVESGSLEDDWDFLPPKKIKDPDASKPEDWDERAKIDDPTDSKPEDWD 237          
BLAST of CK933977 vs. ExPASy Swiss-Prot
Match: CALR_MOUSE (Calreticulin OS=Mus musculus GN=Calr PE=1 SV=1)

HSP 1 Score: 265.003 bits (676), Expect = 3.975e-70
Identity = 126/220 (57.27%), Postives = 159/220 (72.27%), Query Frame = 3
Query:  138 VFFEERFDDG--WESRWVTSDWKKDENTAGEWNYTAGKWNGD-PNDKGIQTSEDYRFYAISAEFPEFSNKDKTLVFQFSVKHEQKLDCGGGYMKLLSGEVDQKKFGGDTPYSIMFGPDICGYSTKKVHAILTYNGTNKLIKKEVPCETDQLTHVYTFILRPDATYSILIDNVEKQSGSLYSDWDLLPPKTIKDPDAKKPEDWDDKEYIPDPEDKKPEGYD 788
            ++F+E+F DG  W +RWV S  K D    G++  ++GK+ GD   DKG+QTS+D RFYA+SA+F  FSNK +TLV QF+VKHEQ +DCGGGY+KL    +DQK   GD+ Y+IMFGPDICG  TKKVH I  Y G N LI K++ C+ D+ TH+YT I+RPD TY + IDN + +SGSL  DWD LPPK IKDPDA KPEDWD++  I DP D KPE +D
Sbjct:   21 IYFKEQFLDGDAWTNRWVESKHKSD---FGKFVLSSGKFYGDLEKDKGLQTSQDARFYALSAKFEPFSNKGQTLVVQFTVKHEQNIDCGGGYVKLFPSGLDQKDMHGDSEYNIMFGPDICGPGTKKVHVIFNYKGKNVLINKDIRCKDDEFTHLYTLIVRPDNTYEVKIDNSQVESGSLEDDWDFLPPKKIKDPDAAKPEDWDERAKIDDPTDSKPEDWD 237          
The following BLAST results are available for this feature:
BLAST of CK933977 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 49
Match NameE-valueIdentityDescription
CALR_CHLRE1.317e-8163.72Calreticulin OS=Chlamydomonas reinhardtii PE=2 SV=... [more]
CALR_DICDI1.507e-7760.27Calreticulin OS=Dictyostelium discoideum GN=crtA P... [more]
CALR_BOMMO7.739e-7460.27Calreticulin OS=Bombyx mori GN=crt PE=1 SV=1[more]
CALR_CRIGR4.695e-7158.18Calreticulin OS=Cricetulus griseus GN=CALR PE=2 SV... [more]
CALR_RAT1.046e-7057.73Calreticulin OS=Rattus norvegicus GN=Calr PE=1 SV=... [more]
CALR_MACFU2.330e-7057.27Calreticulin OS=Macaca fuscata fuscata GN=CALR PE=... [more]
CALR_MACFA2.330e-7057.27Calreticulin OS=Macaca fascicularis GN=CALR PE=2 S... [more]
CALR_HUMAN2.330e-7057.27Calreticulin OS=Homo sapiens GN=CALR PE=1 SV=1[more]
CALR_CERAE2.330e-7057.27Calreticulin OS=Cercopithecus aethiops GN=CALR PE=... [more]
CALR_MOUSE3.975e-7057.27Calreticulin OS=Mus musculus GN=Calr PE=1 SV=1[more]

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Properties
Property NameValue
Genbank descriptionCGF1004542_H11 Developing fruit peel at 38 DAFB Citrus sinensis cDNA clone P38DAB10001_IVF_H11 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK933977 ID=CK933977; Name=CK933977; organism=Citrus sinensis; type=EST; length=877bp
GGGGATATATTCAGTCCTCTTTCACACTTCACTCTACAGAGCACTTCCTC
TCTCTCGCTCTAAAAATGGCGAAATTAAACCCTAGCTTTCTCTCTCTAAC
TCTCCTCACTATCGTCCTGACAATTGCCTCTGCTCACGTCTTCTTCGAAG
AACGCTTTGACGATGGATGGGAAAGCCGGTGGGTTACATCTGATTGGAAG
AAAGATGAGAACACGGCTGGAGAATGGAACTACACTGCTGGGAAATGGAA
TGGGGACCCGAATGATAAAGGTATTCAAACTAGTGAAGACTACAGGTTCT
ATGCTATTTCAGCTGAATTCCCTGAATTCAGCAACAAGGACAAGACACTC
GTGTTCCAGTTTTCTGTTAAGCACGAACAGAAGCTTGACTGTGGTGGTGG
CTACATGAAGTTGCTTAGTGGCGAAGTTGATCAGAAGAAATTTGGTGGTG
ATACCCCTTACAGTATCATGTTTGGACCAGATATCTGTGGTTATAGCACT
AAGAAAGTGCATGCCATTCTTACCTACAATGGAACAAACAAATTGATCAA
GAAGGAAGTACCATGTGAGACTGACCAACTCACTCATGTTTATACTTTCA
TCCTCCGTCCAGATGCTACTTACAGCATCCTCATTGACAATGTGGAGAAA
CAATCTGGTAGCTTGTACTCTGATTGGGATCTCCTCCCTCCAAAGACCAT
CAAGGATCCTGACGCCAAGAAACCTGAAGACTGGGACGACAAAGAATATA
TTCCCGATCCTGAAGACAAGAAGCCAGAGGGCTATGATGACATTCCAAAG
GAGATAACAGATCCTGATGCCAAGAAGCCTGATGATTGGGATGATGAGGA
AGATGGTGAATGGACAGCTCCAACCAT
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