CK933977

Overview
NameCK933977
Unique NameCK933977
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length877
Libraries
Library NameType
Developing fruit peel at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1647 contig Csv1_Contig1647:1..877. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CK933977 vs. ExPASy Swiss-Prot
Match: CALR3_HUMAN (Calreticulin-3 OS=Homo sapiens GN=CALR3 PE=1 SV=2)

HSP 1 Score: 191.43 bits (485), Expect = 5.585e-48
Identity = 95/203 (46.80%), Postives = 132/203 (65.02%), Query Frame = 3
Query:  138 VFFEERFDDG--WESRWVTSDWKKDENTAGEWNYTAGKWNGDPN-DKGIQTSEDYRFYAISAEFPEFSNKDKTLVFQFSVKHEQKLDCGGGYMKLLSGEVDQKKFGGDTPYSIMFGPDICGYSTKKVHAILTYNGTNKLIKKEVPCETDQLTHVYTFILRPDATYSILIDNVEKQSGSLYSDWDLLPPKTIKDPDAKKPEDWD 737
            V+F+E F DG  W +RW+ S    +++  G +  ++GK+ G    DKG+QT+++ RFYAISA F  FSNK KTLV Q++VKHEQK+DCGGGY+K+   ++DQK   G + Y IMFGPDICG+  KKVH IL +       KK + C+ D  TH+YT ILRPD +Y + ID    +SGS+  DW+L   K  K+    + +DW+
Sbjct:   21 VYFQEEFLDGEHWRNRWLQST---NDSRFGHFRLSSGKFYGHKEKDKGLQTTQNGRFYAISARFKPFSNKGKTLVIQYTVKHEQKMDCGGGYIKVFPADIDQKNLNGKSQYYIMFGPDICGFDIKKVHVILHFKNKYHENKKLIRCKVDGFTHLYTLILRPDLSYDVKIDGQSIESGSIEYDWNLTSLK--KETSPAESKDWE 218          
BLAST of CK933977 vs. ExPASy Swiss-Prot
Match: CALX_SOYBN (Calnexin homolog OS=Glycine max PE=2 SV=1)

HSP 1 Score: 162.925 bits (411), Expect = 2.127e-39
Identity = 101/236 (42.80%), Postives = 132/236 (55.93%), Query Frame = 3
Query:  144 FEERFDDGWESRWVTSDWKKDENTAGEWNYTAGKWNGDPNDKGIQTSEDYRFYAISAEFPE-FSNKDKTLVFQFSVKHEQKLDCGGGYMKLLSGEVD---QKKFGGDTPYSIMFGPDICGYSTKKVHAILTYNGTNK------LIKKEVPCETDQLTHVYTFILRPDATYSILIDNVEKQSGSLYSDWD----LLPPKTIKDPDAKKPEDWDDKEYIPDPEDKKPEGYD-DIPKEI 806
            F E FD+ ++ RW+ SD K+D N  G W +     +   +D G+  SE  R YAI  E  E  S KD T+V QF  + +  L+CGG Y+K L  +      K+F  ++PYSIMFGPD CG +T KVH I  +            +K      +D+LTHVYT IL+PD    ILID  EK+  +  S  D    L+P KTI DPD KKPEDWD++  IPDP   KP+ +D D P EI
Sbjct:   40 FYESFDEDFDGRWIVSD-KEDYN--GVWKHAKSDGH---DDYGLLVSEQARKYAIVKELAESVSLKDGTVVLQFETRLQNGLECGGAYIKYLRPQESGWKPKEFDNESPYSIMFGPDKCG-ATNKVHFIFKHKNPKSGEYVEHHLKYPPSVPSDKLTHVYTAILKPDNELQILIDGEEKKKANFLSSEDFEPPLIPSKTIPDPDDKKPEDWDERAKIPDPSAVKPDDWDEDAPMEI 268          
BLAST of CK933977 vs. ExPASy Swiss-Prot
Match: CALX_ASPFU (Calnexin homolog OS=Aspergillus fumigatus GN=AFUA_4G12850 PE=2 SV=2)

HSP 1 Score: 162.925 bits (411), Expect = 2.127e-39
Identity = 102/242 (42.15%), Postives = 139/242 (57.44%), Query Frame = 3
Query:  144 FEERFDDGWESRWVTSDWKKDENTAGE-WNYTAGKW--------NGDPNDKGIQTSEDYRFYAISAEFPE-FSNKDKTLVFQFSVKHEQKLDCGGGYMKLL--SGEVDQKKFGGDTPYSIMFGPDICGYSTKKVHAILTYNG--TNKLIKKEVPC----ETDQLTHVYTFILRPDATYSILIDNVEKQSGSLYSDW--DLLPPKTIKDPDAKKPEDWDDKEYIPDPEDKKPEGYD-DIPKEI 806
            F E+F   W+SRW  S  KK+++ + E W Y  G+W        NG   DKG+        +AISA+FP+   NK KTLV Q+ VK +  L CGG YMKLL  + ++  ++F   TPY IMFGPD CG +T KVH I  +    T +  +K +       T +LT +YT I++PD ++ ILID    ++G+L  D+   + P K I DP  KKP DW D+  IPDPE KKP+ +D D P EI
Sbjct:   50 FLEQFTADWDSRWTPSHAKKEDSKSEEDWAYV-GEWAVEEPTVLNGMVGDKGLVVKNVAAHHAISAKFPKKIDNKGKTLVVQYEVKPQNSLVCGGAYMKLLQENKKLHAEEFSNATPYVIMFGPDKCG-ATNKVHFIFRHKNPKTGEYEEKHMTAPPAARTTKLTTLYTLIVKPDQSFQILIDGEAVKNGTLLEDFAPPVNPEKEIDDPKDKKPADWVDEAKIPDPEAKKPDDWDEDAPYEI 289          
BLAST of CK933977 vs. ExPASy Swiss-Prot
Match: CALX_HELTU (Calnexin homolog OS=Helianthus tuberosus PE=2 SV=1)

HSP 1 Score: 159.458 bits (402), Expect = 2.352e-38
Identity = 96/236 (40.68%), Postives = 133/236 (56.36%), Query Frame = 3
Query:  144 FEERFDDGWESRWVTSDWKKDENTAGEWNYTAGKWNGDPNDKGIQTSEDYRFYAISAEFPE-FSNKDKTLVFQFSVKHEQKLDCGGGYMKLLSGEV---DQKKFGGDTPYSIMFGPDICGYSTKKVHAILTYNGTNK------LIKKEVPCETDQLTHVYTFILRPDATYSILIDNVEKQSGSLYSDWD----LLPPKTIKDPDAKKPEDWDDKEYIPDPEDKKPEGYD-DIPKEI 806
            F E FD+ +E  W+ S+    E+  GEW ++  + +   +D G+  S+  R YAI  E  +    KD T+V Q+ V+ +  L+CGG Y+K L  +      K F  ++PYSIMFGPD CG +T KVH IL +            +K      +D+LTHVYT +++PD    ILID  EK+  +  S  D    L+P KTI DPD KKPEDWD++  IPDPE  KP+ +D D P EI
Sbjct:   35 FYESFDESFEGSWIVSE---KEDYPGEWKHSKSEGH---DDYGLLVSDKARKYAIVKELEKPVELKDGTIVLQYEVRLQNGLECGGAYLKYLRPQDAGWTAKGFDNESPYSIMFGPDKCG-ATNKVHFILKHKNPKSGDYVEHHLKFPPSVPSDKLTHVYTAVIKPDNELVILIDGEEKKKANFLSSEDFEPALIPTKTIPDPDDKKPEDWDERAKIPDPEATKPDDWDEDAPMEI 263          
BLAST of CK933977 vs. ExPASy Swiss-Prot
Match: CALX_PEA (Calnexin homolog OS=Pisum sativum PE=2 SV=1)

HSP 1 Score: 154.451 bits (389), Expect = 7.566e-37
Identity = 98/236 (41.53%), Postives = 136/236 (57.63%), Query Frame = 3
Query:  144 FEERFDDGWESRWVTSDWKKDENTAGEWNYTAGKWNGDPNDKGIQTSEDYRFYAISAEFPE-FSNKDKTLVFQFSVKHEQKLDCGGGYMKLLSGEVD---QKKFGGDTPYSIMFGPDICGYSTKKVHAILTYNG--TNKLIKKEVP----CETDQLTHVYTFILRPDATYSILIDNVEKQSGSLYSDWD----LLPPKTIKDPDAKKPEDWDDKEYIPDPEDKKPEGYD-DIPKEI 806
            F E FD+ +++RW+ S  K++ N  G W ++  + +   +D G+  SE  R YAI  E     S KD T+V QF  + +  L+CGG Y+K L  +      K F  ++ YSIMFGPD CG +T KVH I  +    T K ++  +       +D+L+HVYT +L+ D   SILID  EK+  +  S  D    L+P KTI DPD KKPEDWD++  IPDPE  KPE +D D P+EI
Sbjct:   41 FYESFDEDFDNRWIVSG-KEEYN--GVWKHSKSEGH---DDFGLLVSEPARKYAIVKELDAPVSLKDGTVVLQFETRLQNGLECGGAYIKYLQTQESGWKPKGFDNESGYSIMFGPDRCG-ATNKVHFIFRHKNPKTGKHVEHHLKFPPSVPSDKLSHVYTAVLKDDNEVSILIDGEEKKKANFLSSEDFEPALIPSKTIPDPDDKKPEDWDERAKIPDPEAVKPEDWDEDAPREI 269          
BLAST of CK933977 vs. ExPASy Swiss-Prot
Match: CALX1_ARATH (Calnexin homolog 1 OS=Arabidopsis thaliana GN=CNX1 PE=1 SV=1)

HSP 1 Score: 152.525 bits (384), Expect = 2.875e-36
Identity = 94/234 (40.17%), Postives = 129/234 (55.13%), Query Frame = 3
Query:  150 ERFDDGWESRWVTSDWKKDENTAGEWNYTAGKWNGDPNDKGIQTSEDYRFYAISAEFPEFSN-KDKTLVFQFSVKHEQKLDCGGGYMKLLSGEV---DQKKFGGDTPYSIMFGPDICGYSTKKVHAILTYNGTNK------LIKKEVPCETDQLTHVYTFILRPDATYSILIDNVEKQSGSLYSDWD----LLPPKTIKDPDAKKPEDWDDKEYIPDPEDKKPEGYD-DIPKEI 806
            E FD+ ++ RW+ S   K+ +  G W +   + +    D G+  SE  R Y I  E  E  N K+ T+V Q+ V+ ++ L+CGG Y+K L  +      + F  ++PYSIMFGPD CG  T KVH IL +            +K       D+L+HVYT IL+PD    IL+D  EK+  +L S  D    L+P KTI DP+ KKPEDWD++  IPDP   KPE +D D P EI
Sbjct:   33 ESFDEPFDGRWIVS---KNSDYEGVWKHAKSEGH---EDYGLLVSEKARKYGIVKELDEPLNLKEGTVVLQYEVRFQEGLECGGAYLKYLRPQEAGWTPQGFDSESPYSIMFGPDKCG-GTNKVHFILKHKNPKSGEYVEHHLKFPPSVPYDKLSHVYTAILKPDNEVRILVDGEEKKKANLLSGEDFEPALIPAKTIPDPEDKKPEDWDERAKIPDPNAVKPEDWDEDAPMEI 259          
BLAST of CK933977 vs. ExPASy Swiss-Prot
Match: CALX_PONAB (Calnexin OS=Pongo abelii GN=CANX PE=2 SV=2)

HSP 1 Score: 148.288 bits (373), Expect = 5.422e-35
Identity = 94/246 (38.21%), Postives = 134/246 (54.47%), Query Frame = 3
Query:  138 VFFEERFDDGWESRWVTSDWKKDENTAGEWNYTAGKWNGD-------PNDKGIQTSEDYRFYAISAEFPE-FSNKDKTLVFQFSVKHEQKLDCGGGYMKLLSG--EVDQKKFGGDTPYSIMFGPDICGYSTKKVHAILTYNGTNKLIKKEVPCE----------TDQLTHVYTFILRPDATYSILIDNVEKQSGSLYSDWD--LLPPKTIKDPDAKKPEDWDDKEYIPDPEDKKPEGYD-DIPKEI 806
            V+F + FD G  S W+ S  KKD+ T  E     GKW  D       P DKG+      + +AISA+  + F    K L+ Q+ V  +  ++CGG Y+KLLS   E++  +F   TPY+IMFGPD CG    K+H I  +      I +E   +          TD+ TH+YT IL PD ++ IL+D     SG+L +D    + P + I+DP+ +KPEDWD++  IPDPE  KP+ +D D P +I
Sbjct:   69 VYFADSFDRGTLSGWILSKAKKDD-TDDEIAKYDGKWEVDEMKESKLPGDKGLVLMSRAKHHAISAKLNKPFLFDTKPLIVQYEVNFQNGIECGGAYVKLLSKTPELNLDQFHDKTPYTIMFGPDKCG-EDYKLHFIFRHKNPKTGIYEEKHAKRPDADLKTYFTDKKTHLYTLILNPDNSFEILVDQSVVNSGNLLNDMTPPVNPSREIEDPEDRKPEDWDERPKIPDPEAVKPDDWDEDAPAKI 312          
BLAST of CK933977 vs. ExPASy Swiss-Prot
Match: CALX_HUMAN (Calnexin OS=Homo sapiens GN=CANX PE=1 SV=2)

HSP 1 Score: 147.517 bits (371), Expect = 9.248e-35
Identity = 91/245 (37.14%), Postives = 133/245 (54.29%), Query Frame = 3
Query:  138 VFFEERFDDGWESRWVTSDWKKDENTA------GEWNYTAGKWNGDPNDKGIQTSEDYRFYAISAEFPE-FSNKDKTLVFQFSVKHEQKLDCGGGYMKLLSG--EVDQKKFGGDTPYSIMFGPDICGYSTKKVHAILTYNGTNKLIKKEVPCE----------TDQLTHVYTFILRPDATYSILIDNVEKQSGSLYSDWD--LLPPKTIKDPDAKKPEDWDDKEYIPDPEDKKPEGYD-DIPKEI 806
            V+F + FD G  S W+ S  KKD+         G+W     K +  P DKG+      + +AISA+  + F    K L+ Q+ V  +  ++CGG Y+KLLS   E++  +F   TPY+IMFGPD CG    K+H I  +      I +E   +          TD+ TH+YT IL PD ++ IL+D     SG+L +D    + P + I+DP+ +KPEDWD++  IPDPE  KP+ +D D P +I
Sbjct:   69 VYFADSFDRGTLSGWILSKAKKDDTDDEIAKYDGKWEVEEMKESKLPGDKGLVLMSRAKHHAISAKLNKPFLFDTKPLIVQYEVNFQNGIECGGAYVKLLSKTPELNLDQFHDKTPYTIMFGPDKCG-EDYKLHFIFRHKNPKTGIYEEKHAKRPDADLKTYFTDKKTHLYTLILNPDNSFEILVDQSVVNSGNLLNDMTPPVNPSREIEDPEDRKPEDWDERPKIPDPEAVKPDDWDEDAPAKI 312          
BLAST of CK933977 vs. ExPASy Swiss-Prot
Match: CLGN_MOUSE (Calmegin OS=Mus musculus GN=Clgn PE=2 SV=1)

HSP 1 Score: 145.591 bits (366), Expect = 3.514e-34
Identity = 87/239 (36.40%), Postives = 125/239 (52.30%), Query Frame = 3
Query:  138 VFFEERFDDGWESRWVTSDWKKDENTA------GEWNYTAGKWNGDPNDKGIQTSEDYRFYAISAEFPE-FSNKDKTLVFQFSVKHEQKLDCGGGYMKLLS--GEVDQKKFGGDTPYSIMFGPDICGYSTKKVHAILTYNGTNKLIKKEVPCE----------TDQLTHVYTFILRPDATYSILIDNVEKQSGSLYSDW--DLLPPKTIKDPDAKKPEDWDDKEYIPDPEDKKPEGYDD 791
            V+F E FD G  + WV S  KKD+  +      G W     K N  P D+G+      + +AI+A   + F   DK L+ Q+ V  +  +DCGG Y+KLL+  G++  + F   T Y+IMFGPD CG    K+H I  +      + +E   +          TD+ TH+YT ++ PD T+ +LID      G+L  D    + PP+ I DP  KKPE+WDD+  IPDP   KPE +D+
Sbjct:   60 VYFTETFDSGNLAGWVLSKAKKDDMDSEIAIYDGRWEIEELKENQVPGDRGLVLKSKAKHHAIAAVLEKPFIFADKPLIVQYEVNFQDGIDCGGAYIKLLADTGDLILENFYDKTSYTIMFGPDKCG-EDYKLHLIFRHKHPKTGVFEEKHAKPPDVDLKEFFTDRKTHLYTLVMNPDDTFEVLIDQKVVNQGTLLDDVVPPINPPREIDDPSDKKPEEWDDRAKIPDPTAVKPEDWDE 297          
BLAST of CK933977 vs. ExPASy Swiss-Prot
Match: CLGN_HUMAN (Calmegin OS=Homo sapiens GN=CLGN PE=1 SV=1)

HSP 1 Score: 145.591 bits (366), Expect = 3.514e-34
Identity = 88/239 (36.82%), Postives = 123/239 (51.46%), Query Frame = 3
Query:  138 VFFEERFDDGWESRWVTSDWKKDENTA------GEWNYTAGKWNGDPNDKGIQTSEDYRFYAISAEFPE-FSNKDKTLVFQFSVKHEQKLDCGGGYMKLLSGEVDQ--KKFGGDTPYSIMFGPDICGYSTKKVHAILTYNGTNKLIKKEVPCE----------TDQLTHVYTFILRPDATYSILIDNVEKQSGSLYSDW--DLLPPKTIKDPDAKKPEDWDDKEYIPDPEDKKPEGYDD 791
            V+F E FD G  + WV S  KKD+         G W     K N  P D+G+      + +AISA   + F   DK L+ Q+ V  +  +DCGG Y+KLL+   D   + F   T Y IMFGPD CG    K+H I  +      + +E   +          TD+ TH+YT ++ PD T+ +L+D      GSL  D    + PPK I+DP+ KKPE+WD++  IPDP   KPE +D+
Sbjct:   60 VYFAETFDSGRLAGWVLSKAKKDDMDEEISIYDGRWEIEELKENQVPGDRGLVLKSRAKHHAISAVLAKPFIFADKPLIVQYEVNFQDGIDCGGAYIKLLADTDDLILENFYDKTSYIIMFGPDKCG-EDYKLHFIFRHKHPKTGVFEEKHAKPPDVDLKKFFTDRKTHLYTLVMNPDDTFEVLVDQTVVNKGSLLEDVVPPIKPPKEIEDPNDKKPEEWDERAKIPDPSAVKPEDWDE 297          
The following BLAST results are available for this feature:
BLAST of CK933977 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 49
Match NameE-valueIdentityDescription
CALR3_HUMAN5.585e-4846.80Calreticulin-3 OS=Homo sapiens GN=CALR3 PE=1 SV=2[more]
CALX_SOYBN2.127e-3942.80Calnexin homolog OS=Glycine max PE=2 SV=1[more]
CALX_ASPFU2.127e-3942.15Calnexin homolog OS=Aspergillus fumigatus GN=AFUA_... [more]
CALX_HELTU2.352e-3840.68Calnexin homolog OS=Helianthus tuberosus PE=2 SV=1[more]
CALX_PEA7.566e-3741.53Calnexin homolog OS=Pisum sativum PE=2 SV=1[more]
CALX1_ARATH2.875e-3640.17Calnexin homolog 1 OS=Arabidopsis thaliana GN=CNX1... [more]
CALX_PONAB5.422e-3538.21Calnexin OS=Pongo abelii GN=CANX PE=2 SV=2[more]
CALX_HUMAN9.248e-3537.14Calnexin OS=Homo sapiens GN=CANX PE=1 SV=2[more]
CLGN_MOUSE3.514e-3436.40Calmegin OS=Mus musculus GN=Clgn PE=2 SV=1[more]
CLGN_HUMAN3.514e-3436.82Calmegin OS=Homo sapiens GN=CLGN PE=1 SV=1[more]

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Properties
Property NameValue
Genbank descriptionCGF1004542_H11 Developing fruit peel at 38 DAFB Citrus sinensis cDNA clone P38DAB10001_IVF_H11 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK933977 ID=CK933977; Name=CK933977; organism=Citrus sinensis; type=EST; length=877bp
GGGGATATATTCAGTCCTCTTTCACACTTCACTCTACAGAGCACTTCCTC
TCTCTCGCTCTAAAAATGGCGAAATTAAACCCTAGCTTTCTCTCTCTAAC
TCTCCTCACTATCGTCCTGACAATTGCCTCTGCTCACGTCTTCTTCGAAG
AACGCTTTGACGATGGATGGGAAAGCCGGTGGGTTACATCTGATTGGAAG
AAAGATGAGAACACGGCTGGAGAATGGAACTACACTGCTGGGAAATGGAA
TGGGGACCCGAATGATAAAGGTATTCAAACTAGTGAAGACTACAGGTTCT
ATGCTATTTCAGCTGAATTCCCTGAATTCAGCAACAAGGACAAGACACTC
GTGTTCCAGTTTTCTGTTAAGCACGAACAGAAGCTTGACTGTGGTGGTGG
CTACATGAAGTTGCTTAGTGGCGAAGTTGATCAGAAGAAATTTGGTGGTG
ATACCCCTTACAGTATCATGTTTGGACCAGATATCTGTGGTTATAGCACT
AAGAAAGTGCATGCCATTCTTACCTACAATGGAACAAACAAATTGATCAA
GAAGGAAGTACCATGTGAGACTGACCAACTCACTCATGTTTATACTTTCA
TCCTCCGTCCAGATGCTACTTACAGCATCCTCATTGACAATGTGGAGAAA
CAATCTGGTAGCTTGTACTCTGATTGGGATCTCCTCCCTCCAAAGACCAT
CAAGGATCCTGACGCCAAGAAACCTGAAGACTGGGACGACAAAGAATATA
TTCCCGATCCTGAAGACAAGAAGCCAGAGGGCTATGATGACATTCCAAAG
GAGATAACAGATCCTGATGCCAAGAAGCCTGATGATTGGGATGATGAGGA
AGATGGTGAATGGACAGCTCCAACCAT
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