CK933977

Overview
NameCK933977
Unique NameCK933977
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length877
Libraries
Library NameType
Developing fruit peel at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1647 contig Csv1_Contig1647:1..877. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CK933977 vs. ExPASy Swiss-Prot
Match: CLGN_BOVIN (Calmegin OS=Bos taurus GN=CLGN PE=2 SV=1)

HSP 1 Score: 144.436 bits (363), Expect = 7.829e-34
Identity = 88/239 (36.82%), Postives = 125/239 (52.30%), Query Frame = 3
Query:  138 VFFEERFDDGWESRWVTSDWKKDENTA------GEWNYTAGKWNGDPNDKGIQTSEDYRFYAISAEFPE-FSNKDKTLVFQFSVKHEQKLDCGGGYMKLLSGE--VDQKKFGGDTPYSIMFGPDICGYSTKKVHAILTYNGTNKLIKKEVPCE----------TDQLTHVYTFILRPDATYSILIDNVEKQSGSLYSDW--DLLPPKTIKDPDAKKPEDWDDKEYIPDPEDKKPEGYDD 791
            V+F E FD G  + WV S  KKD+  A      G W     K N  P D+G+      + +AISA   + F   DK LV Q+ V  +  +DCGG Y+KLL+    ++ + F   T Y+IMFGPD CG    K+H I  +      + +E   +          TD+ TH+YT ++ PD T+ +LID +    GSL  D    + PPK I+DP  +KP+DWD++  IPD    KPE +D+
Sbjct:   56 VYFTETFDSGRLAGWVLSKAKKDDIDAEISIYDGRWEIEELKENRIPGDRGLVLKSRAKHHAISAVLAKPFIFADKPLVVQYEVNFQDGIDCGGAYIKLLADTDGLNLENFYDKTSYTIMFGPDKCG-EDYKLHFIFRHKHPKTGVFEEKHAKPPDVDLKRFFTDRKTHLYTLVMNPDDTFEVLIDQIVVNKGSLLEDVVPPINPPKEIEDPTDEKPDDWDERAKIPDASAVKPEDWDE 293          
BLAST of CK933977 vs. ExPASy Swiss-Prot
Match: CALX_RAT (Calnexin OS=Rattus norvegicus GN=Canx PE=1 SV=1)

HSP 1 Score: 144.436 bits (363), Expect = 7.829e-34
Identity = 91/246 (36.99%), Postives = 133/246 (54.07%), Query Frame = 3
Query:  138 VFFEERFDDGWESRWVTSDWKKDENTAGEWNYTAGKWNGD-------PNDKGIQTSEDYRFYAISAEFPE-FSNKDKTLVFQFSVKHEQKLDCGGGYMKLLS--GEVDQKKFGGDTPYSIMFGPDICGYSTKKVHAILTYNGTNKLIKKEVPCE----------TDQLTHVYTFILRPDATYSILIDNVEKQSGSLYSDWD--LLPPKTIKDPDAKKPEDWDDKEYIPDPEDKKPEGYD-DIPKEI 806
            V+F + FD G  S W+ S  KKD+ T  E     GKW  D       P DKG+      + +AISA+  + F    K L+ Q+ V  +  ++CGG Y+KLLS   E++  +F   TPY+IMFGPD CG    K+H I  +      + +E   +          TD+ TH+YT IL PD ++ IL+D     SG+L +D    + P + I+DP+ +KPEDWD++  I DP+  KP+ +D D P +I
Sbjct:   70 VYFADSFDRGSLSGWILSKAKKDD-TDDEIAKYDGKWEVDEMKETKLPGDKGLVLMSRAKHHAISAKLNKPFLFDTKPLIVQYEVNFQNGIECGGAYVKLLSKTSELNLDQFHDKTPYTIMFGPDKCG-EDYKLHFIFRHKNPKTGVYEEKHAKRPDADLKTYFTDKKTHLYTLILNPDNSFEILVDQSVVNSGNLLNDMTPPVNPSREIEDPEDRKPEDWDERPKIADPDAVKPDDWDEDAPSKI 313          
BLAST of CK933977 vs. ExPASy Swiss-Prot
Match: CALX_CANFA (Calnexin OS=Canis familiaris GN=CANX PE=1 SV=3)

HSP 1 Score: 144.436 bits (363), Expect = 7.829e-34
Identity = 91/246 (36.99%), Postives = 134/246 (54.47%), Query Frame = 3
Query:  138 VFFEERFDDGWESRWVTSDWKKDENTAGEWNYTAGKWNGD-------PNDKGIQTSEDYRFYAISAEFPE-FSNKDKTLVFQFSVKHEQKLDCGGGYMKLLSG--EVDQKKFGGDTPYSIMFGPDICGYSTKKVHAILTYNGTNKLIKKEVPCE----------TDQLTHVYTFILRPDATYSILIDNVEKQSGSLYSDWD--LLPPKTIKDPDAKKPEDWDDKEYIPDPEDKKPEGY-DDIPKEI 806
            V+F + FD G  S W+ S  KKD+ T  E     GKW  D       P DKG+      + +AISA+  + F    K L+ Q+ V  +  ++CGG Y+KLLS   E++  +F   TPY+IMFGPD CG    K+H I  +      + +E   +          TD+ TH+YT IL PD ++ IL+D     SG+L +D    + P + I+DP+ +KPEDWD++  IPDP+  KP+ + +D P +I
Sbjct:   70 VYFADSFDRGTLSGWILSKAKKDD-TDDEIAKYDGKWEVDEMKETKLPGDKGLVLMSRAKHHAISAKLNKPFLFDTKPLIVQYEVNFQNGIECGGAYVKLLSKTPELNLDQFHDKTPYTIMFGPDKCG-EDYKLHFIFRHKNPKTGVYEEKHAKRPDADLKTYFTDKKTHLYTLILNPDNSFEILVDQSIVNSGNLLNDMTPPVNPSREIEDPEDQKPEDWDERPKIPDPDAVKPDDWNEDAPAKI 313          
BLAST of CK933977 vs. ExPASy Swiss-Prot
Match: CALX_MOUSE (Calnexin OS=Mus musculus GN=Canx PE=1 SV=1)

HSP 1 Score: 144.05 bits (362), Expect = 1.023e-33
Identity = 91/246 (36.99%), Postives = 132/246 (53.66%), Query Frame = 3
Query:  138 VFFEERFDDGWESRWVTSDWKKDENTAGEWNYTAGKWNGD-------PNDKGIQTSEDYRFYAISAEFPE-FSNKDKTLVFQFSVKHEQKLDCGGGYMKLLS--GEVDQKKFGGDTPYSIMFGPDICGYSTKKVHAILTYNGTNKLIKKEVPCE----------TDQLTHVYTFILRPDATYSILIDNVEKQSGSLYSDWD--LLPPKTIKDPDAKKPEDWDDKEYIPDPEDKKPEGYD-DIPKEI 806
            V+F + FD G  S W+ S  KKD+ T  E     GKW  D       P DKG+      + +AISA+  + F    K L+ Q+ V  +  ++CGG Y+KLLS   E+   +F   TPY+IMFGPD CG    K+H I  +      + +E   +          TD+ TH+YT IL PD ++ IL+D     SG+L +D    + P + I+DP+ +KPEDWD++  I DP+  KP+ +D D P +I
Sbjct:   70 VYFADSFDRGSLSGWILSKAKKDD-TDDEIAKYDGKWEVDEMKETKLPGDKGLVLMSRAKHHAISAKLNKPFLFDTKPLIVQYEVNFQNGIECGGAYVKLLSKTAELSLDQFHDKTPYTIMFGPDKCG-EDYKLHFIFRHKNPKTGVYEEKHAKRPDADLKTYFTDKKTHLYTLILNPDNSFEILVDQSVVNSGNLLNDMTPPVNPSREIEDPEDRKPEDWDERPKIADPDAVKPDDWDEDAPSKI 313          
BLAST of CK933977 vs. ExPASy Swiss-Prot
Match: CALX2_ARATH (Calnexin homolog 2 OS=Arabidopsis thaliana GN=At5g07340 PE=2 SV=2)

HSP 1 Score: 142.124 bits (357), Expect = 3.886e-33
Identity = 91/237 (38.40%), Postives = 129/237 (54.43%), Query Frame = 3
Query:  150 ERFDDGWESRWVTSDWKKDENTAGEWNYTAGKWNGDPNDKGIQTSEDYRFYAISAEFP---EFSNKDKTLVFQFSVKHEQKLDCGGGYMKLL----SGEVDQKKFGGDTPYSIMFGPDICGYSTKKVHAILTYNGTNK------LIKKEVPCETDQLTHVYTFILRPDATYSILIDNVEKQSGSLYSDWD----LLPPKTIKDPDAKKPEDWDDKEYIPDPEDKKPEGYD-DIPKEI 806
            E FD+ ++ RWV S+  + +   G W +   + +   +D G+  SE  + Y I  E       +  + T+V Q+  + ++ L+CGG Y+K L    +G V Q  F  D+PYSIMFGPD CG +T KVH IL +            +K       D L+HVYT +L+ D    IL+D  EK+ G+L S  D    L+P KTI DP+ KKPEDWD++  IPDP   KP+ +D D P EI
Sbjct:   33 ESFDEPFDGRWVVSEKAEYQ---GVWKHEKSEGH---DDYGLLVSEKAKKYGIVKELDVDEPLNLNEGTVVLQYEARFQEGLECGGAYLKYLRPQEAGWVPQG-FDNDSPYSIMFGPDKCG-ATNKVHFILKHKNPKSGEFVEHHLKFPPSVPFDMLSHVYTAVLKSDNEVRILVDGEEKKKGNLLSAEDFEPPLIPSKTIPDPEDKKPEDWDERAKIPDPNAVKPDDWDEDAPMEI 261          
BLAST of CK933977 vs. ExPASy Swiss-Prot
Match: CALX_SCHPO (Calnexin homolog OS=Schizosaccharomyces pombe GN=cal1 PE=1 SV=1)

HSP 1 Score: 127.487 bits (319), Expect = 9.904e-29
Identity = 83/238 (34.87%), Postives = 125/238 (52.52%), Query Frame = 3
Query:  150 ERFDDGWESRWVTSDWKKDENTAGEWNYTAGKWNGDPN--------DKGIQTSEDYRFYAISAEFPEFSNK-DKTLVFQFSVKHEQKLDCGGGYMKLLSGEVDQKKFGGDTPYSIMFGPDICGYSTKKVHAILTYNG--TNKLIKKEVPCETDQL-----THVYTFILRPDATYSILIDNVEKQSGSLYSDW--DLLPPKTIKDPDAKKPEDWDDKEYIPDPEDKKPEGYD-DIPKEI 806
            E+F   W  RW+ S  K+  N   E +Y  G+W  + +        + G+   ++   +AIS EF E  N+ +K LV Q+ V  E+ L+CGG Y+KLL+ E    +      Y IMFGPD CG + + VH I  +    T +  +K +      L     T++YT I++PD T+ + I+    + GSL+ D+   +LPP  I DP+  KP DW D+  IPDP   KP+ +D D P+ I
Sbjct:   44 EQFQGAWSERWIPSHAKRFVNGIEEMSYV-GEWTVEESSGPGALKGEAGLVMKDEAAHHAISYEFDEPINEPEKDLVVQYEVNPEEGLNCGGAYLKLLA-EPTHGEMSNSIDYRIMFGPDKCGVNDR-VHFIFKHKNPLTGEYSEKHLDSRPASLLKPGITNLYTLIVKPDQTFEVRINGDVVRQGSLFYDFIPPVLPPVEIYDPEDIKPADWVDEPEIPDPNAVKPDDWDEDAPRMI 278          
BLAST of CK933977 vs. ExPASy Swiss-Prot
Match: CALX_CAEEL (Calnexin homolog OS=Caenorhabditis elegans GN=cnx-1 PE=1 SV=1)

HSP 1 Score: 120.553 bits (301), Expect = 1.211e-26
Identity = 81/225 (36.00%), Postives = 111/225 (49.33%), Query Frame = 3
Query:  180 WVTSDWKKDENTA------GEWNYTAGKWNGDPNDKGIQTSEDYRFYAISAEF-PEFSNKDKTLVFQFSVKHEQKLDCGGGYMKLLS--GEVDQKKFGGDTPYSIMFGPDICGYSTKKVHAILTY----NGTNKLIKKEVPCET------DQLTHVYTFILRPDATYSILIDNVEKQSGSLYSDWD--LLPPKTIKDPDAKKPEDWDDKEYIPDPEDKKPEGYDD 791
            W+ S  KKD+  +      GEW+  A        D G+      R +AI+A+    F+    T V Q+ +K E+  +CGGGY+KLLS   E D   F   T Y+IMFGPD CG +T KVH I  Y    NGT        P         D  TH++T +++P   YS+ +D      G++ SD    L PPK I D    KP DWD++E I D    KP+ +D+
Sbjct:   75 WIKSLAKKDDVDSDIAKYNGEWSIGAPTKVSIEGDLGLIVKTKARHHAIAAKLNTPFAFDANTFVVQYDIKFEEGQECGGGYLKLLSEGAEKDLANFQDKTAYTIMFGPDKCG-ATGKVHLIFRYKNPINGTISEYHANQPTTIGSTYWDDHNTHLFTLVVKPTGEYSVSVDGKSLYYGNMMSDVTPALTPPKQIFDETDLKPVDWDERENIEDESAVKPDDWDE 298          
BLAST of CK933977 vs. ExPASy Swiss-Prot
Match: CALR_PIG (Calreticulin (Fragment) OS=Sus scrofa GN=CALR PE=1 SV=2)

HSP 1 Score: 90.8929 bits (224), Expect = 1.027e-17
Identity = 46/88 (52.27%), Postives = 61/88 (69.32%), Query Frame = 3
Query:  138 VFFEERF--DDGWESRWVTSDWKKDENTAGEWNYTAGKWNGDPN-DKGIQTSEDYRFYAISAEFPEFSNKDKTLVFQFSVKHEQKLDC 392
            ++F+E+F   DGW  RW+ S  K D    G +  ++GK+ GD   DKG+QTS+D RFYA+SA F  FSNK +TLV QF+VKHEQ +DC
Sbjct:   21 IYFKEQFLDGDGWTDRWIESKHKPD---FGRFVLSSGKFYGDQEKDKGLQTSQDARFYALSARFEPFSNKGQTLVVQFTVKHEQNIDC 105          
BLAST of CK933977 vs. ExPASy Swiss-Prot
Match: CALX_YEAST (Calnexin homolog OS=Saccharomyces cerevisiae GN=CNE1 PE=1 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 4.316e-16
Identity = 67/229 (29.26%), Postives = 104/229 (45.41%), Query Frame = 3
Query:  180 WVTSDWKKDENT---AGEWNYTAGKWNGDPNDKGI--QTSEDYRFYAISAEFPEFSNKDKTLVFQFSVKHEQKLDCGGGYMKLLSGEVDQ---KKFGGDTP-YSIMFGPDICG-------YSTKKVHAILTYNGTNKLIKKEVPCETD-QLTHVYTFILRPDA-TYSILIDNVE-------KQSGSLYSDWDLLPPKTIKDPDAKKPEDWDDKEYIPDPEDKKPEGYDD 791
            W+TS+   +E +     +W  + G+  G   DKGI  +T           E P   ++  TLV Q+ +K +  L CGG ++KL+SG ++    K +  DT    ++FGPD C        ++  KV  I   +    L +  +   TD   +H+YT I+   A ++ ILID          +    +  +  + PP  I D    KP DWDD+  IPDPE  K    D+
Sbjct:   50 WITSEAVNNEGSKIYGAQWRLSQGRLQGSAWDKGIAVRTGNAAAMIGHLLETPINVSETDTLVVQYEIKLDNSLTCGGAFIKLMSGFMNVEALKHYAPDTEGVELVFGPDYCAPEINGVQFAINKVDKITHESKLRYLQEMPLSKLTDTSQSHLYTLIIDESAQSFQILIDGKTVMVREHIEDKKKVNFEPPITPPLMIPDVSVAKPHDWDDRIRIPDPEAVKLSDRDE 278          
The following BLAST results are available for this feature:
BLAST of CK933977 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 49
Match NameE-valueIdentityDescription
CLGN_BOVIN7.829e-3436.82Calmegin OS=Bos taurus GN=CLGN PE=2 SV=1[more]
CALX_RAT7.829e-3436.99Calnexin OS=Rattus norvegicus GN=Canx PE=1 SV=1[more]
CALX_CANFA7.829e-3436.99Calnexin OS=Canis familiaris GN=CANX PE=1 SV=3[more]
CALX_MOUSE1.023e-3336.99Calnexin OS=Mus musculus GN=Canx PE=1 SV=1[more]
CALX2_ARATH3.886e-3338.40Calnexin homolog 2 OS=Arabidopsis thaliana GN=At5g... [more]
CALX_SCHPO9.904e-2934.87Calnexin homolog OS=Schizosaccharomyces pombe GN=c... [more]
CALX_CAEEL1.211e-2636.00Calnexin homolog OS=Caenorhabditis elegans GN=cnx-... [more]
CALR_PIG1.027e-1752.27Calreticulin (Fragment) OS=Sus scrofa GN=CALR PE=1... [more]
CALX_YEAST4.316e-1629.26Calnexin homolog OS=Saccharomyces cerevisiae GN=CN... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004542_H11 Developing fruit peel at 38 DAFB Citrus sinensis cDNA clone P38DAB10001_IVF_H11 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK933977 ID=CK933977; Name=CK933977; organism=Citrus sinensis; type=EST; length=877bp
GGGGATATATTCAGTCCTCTTTCACACTTCACTCTACAGAGCACTTCCTC
TCTCTCGCTCTAAAAATGGCGAAATTAAACCCTAGCTTTCTCTCTCTAAC
TCTCCTCACTATCGTCCTGACAATTGCCTCTGCTCACGTCTTCTTCGAAG
AACGCTTTGACGATGGATGGGAAAGCCGGTGGGTTACATCTGATTGGAAG
AAAGATGAGAACACGGCTGGAGAATGGAACTACACTGCTGGGAAATGGAA
TGGGGACCCGAATGATAAAGGTATTCAAACTAGTGAAGACTACAGGTTCT
ATGCTATTTCAGCTGAATTCCCTGAATTCAGCAACAAGGACAAGACACTC
GTGTTCCAGTTTTCTGTTAAGCACGAACAGAAGCTTGACTGTGGTGGTGG
CTACATGAAGTTGCTTAGTGGCGAAGTTGATCAGAAGAAATTTGGTGGTG
ATACCCCTTACAGTATCATGTTTGGACCAGATATCTGTGGTTATAGCACT
AAGAAAGTGCATGCCATTCTTACCTACAATGGAACAAACAAATTGATCAA
GAAGGAAGTACCATGTGAGACTGACCAACTCACTCATGTTTATACTTTCA
TCCTCCGTCCAGATGCTACTTACAGCATCCTCATTGACAATGTGGAGAAA
CAATCTGGTAGCTTGTACTCTGATTGGGATCTCCTCCCTCCAAAGACCAT
CAAGGATCCTGACGCCAAGAAACCTGAAGACTGGGACGACAAAGAATATA
TTCCCGATCCTGAAGACAAGAAGCCAGAGGGCTATGATGACATTCCAAAG
GAGATAACAGATCCTGATGCCAAGAAGCCTGATGATTGGGATGATGAGGA
AGATGGTGAATGGACAGCTCCAACCAT
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