CK933981

Overview
NameCK933981
Unique NameCK933981
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length832
Libraries
Library NameType
Developing fruit peel at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of CK933981 vs. ExPASy Swiss-Prot
Match: CALM_HUMAN (Calmodulin OS=Homo sapiens GN=CALM1 PE=1 SV=2)

HSP 1 Score: 85.5001 bits (210), Expect = 4.012e-16
Identity = 58/156 (37.18%), Postives = 80/156 (51.28%), Query Frame = 1 
Query:  283 AELKRVFATFDKDGDGFITKTELVESLRNLRLMVTDMEAEEMVAKVDANGDGLIEFDEF-CMLYEGMMGGDRQEKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGLISVEELGLVLSALGLNEGNKIENCKKMIRKVDVDGDGMVNFDEFRRMMKA 747
            AE K  F+ FDKDGDG IT  EL   +R+L    T+ E ++M+ +VDA+G+G I+F EF  M+   M   D +E+                             G IS  EL  V++ LG  E    E   +MIR+ D+DGDG VN++EF +MM A
Sbjct:   11 AEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEE----------------IREAFRVFDKDGNGYISAAELRHVMTNLG--EKLTDEEVDEMIREADIDGDGQVNYEEFVQMMTA 148
[Close]
BLAST of CK933981 vs. ExPASy Swiss-Prot
Match: CALM_GECJA (Calmodulin OS=Gecko japonicus GN=GekBS194P PE=2 SV=3)

HSP 1 Score: 85.5001 bits (210), Expect = 4.012e-16
Identity = 58/156 (37.18%), Postives = 80/156 (51.28%), Query Frame = 1 
Query:  283 AELKRVFATFDKDGDGFITKTELVESLRNLRLMVTDMEAEEMVAKVDANGDGLIEFDEF-CMLYEGMMGGDRQEKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGLISVEELGLVLSALGLNEGNKIENCKKMIRKVDVDGDGMVNFDEFRRMMKA 747
            AE K  F+ FDKDGDG IT  EL   +R+L    T+ E ++M+ +VDA+G+G I+F EF  M+   M   D +E+                             G IS  EL  V++ LG  E    E   +MIR+ D+DGDG VN++EF +MM A
Sbjct:   11 AEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEE----------------IREAFRVFDKDGNGYISAAELRHVMTNLG--EKLTDEEVDEMIREADIDGDGQVNYEEFVQMMTA 148
[Close]
BLAST of CK933981 vs. ExPASy Swiss-Prot
Match: CALM_DANRE (Calmodulin OS=Danio rerio GN=calm1a PE=2 SV=3)

HSP 1 Score: 85.5001 bits (210), Expect = 4.012e-16
Identity = 58/156 (37.18%), Postives = 80/156 (51.28%), Query Frame = 1 
Query:  283 AELKRVFATFDKDGDGFITKTELVESLRNLRLMVTDMEAEEMVAKVDANGDGLIEFDEF-CMLYEGMMGGDRQEKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGLISVEELGLVLSALGLNEGNKIENCKKMIRKVDVDGDGMVNFDEFRRMMKA 747
            AE K  F+ FDKDGDG IT  EL   +R+L    T+ E ++M+ +VDA+G+G I+F EF  M+   M   D +E+                             G IS  EL  V++ LG  E    E   +MIR+ D+DGDG VN++EF +MM A
Sbjct:   11 AEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEE----------------IREAFRVFDKDGNGYISAAELRHVMTNLG--EKLTDEEVDEMIREADIDGDGQVNYEEFVQMMTA 148
[Close]
BLAST of CK933981 vs. ExPASy Swiss-Prot
Match: CALM_CTEID (Calmodulin OS=Ctenopharyngodon idella GN=calm PE=2 SV=3)

HSP 1 Score: 85.5001 bits (210), Expect = 4.012e-16
Identity = 58/156 (37.18%), Postives = 80/156 (51.28%), Query Frame = 1 
Query:  283 AELKRVFATFDKDGDGFITKTELVESLRNLRLMVTDMEAEEMVAKVDANGDGLIEFDEF-CMLYEGMMGGDRQEKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGLISVEELGLVLSALGLNEGNKIENCKKMIRKVDVDGDGMVNFDEFRRMMKA 747
            AE K  F+ FDKDGDG IT  EL   +R+L    T+ E ++M+ +VDA+G+G I+F EF  M+   M   D +E+                             G IS  EL  V++ LG  E    E   +MIR+ D+DGDG VN++EF +MM A
Sbjct:   11 AEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEE----------------IREAFRVFDKDGNGYISAAELRHVMTNLG--EKLTDEEVDEMIREADIDGDGQVNYEEFVQMMTA 148
[Close]
BLAST of CK933981 vs. ExPASy Swiss-Prot
Match: CALM_CHICK (Calmodulin OS=Gallus gallus GN=CALM PE=1 SV=2)

HSP 1 Score: 85.5001 bits (210), Expect = 4.012e-16
Identity = 58/156 (37.18%), Postives = 80/156 (51.28%), Query Frame = 1 
Query:  283 AELKRVFATFDKDGDGFITKTELVESLRNLRLMVTDMEAEEMVAKVDANGDGLIEFDEF-CMLYEGMMGGDRQEKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGLISVEELGLVLSALGLNEGNKIENCKKMIRKVDVDGDGMVNFDEFRRMMKA 747
            AE K  F+ FDKDGDG IT  EL   +R+L    T+ E ++M+ +VDA+G+G I+F EF  M+   M   D +E+                             G IS  EL  V++ LG  E    E   +MIR+ D+DGDG VN++EF +MM A
Sbjct:   11 AEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEE----------------IREAFRVFDKDGNGYISAAELRHVMTNLG--EKLTDEEVDEMIREADIDGDGQVNYEEFVQMMTA 148
[Close]
BLAST of CK933981 vs. ExPASy Swiss-Prot
Match: CALM_BOVIN (Calmodulin OS=Bos taurus GN=CALM PE=1 SV=2)

HSP 1 Score: 85.5001 bits (210), Expect = 4.012e-16
Identity = 58/156 (37.18%), Postives = 80/156 (51.28%), Query Frame = 1 
Query:  283 AELKRVFATFDKDGDGFITKTELVESLRNLRLMVTDMEAEEMVAKVDANGDGLIEFDEF-CMLYEGMMGGDRQEKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGLISVEELGLVLSALGLNEGNKIENCKKMIRKVDVDGDGMVNFDEFRRMMKA 747
            AE K  F+ FDKDGDG IT  EL   +R+L    T+ E ++M+ +VDA+G+G I+F EF  M+   M   D +E+                             G IS  EL  V++ LG  E    E   +MIR+ D+DGDG VN++EF +MM A
Sbjct:   11 AEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEE----------------IREAFRVFDKDGNGYISAAELRHVMTNLG--EKLTDEEVDEMIREADIDGDGQVNYEEFVQMMTA 148
[Close]
BLAST of CK933981 vs. ExPASy Swiss-Prot
Match: CALM_ANAPL (Calmodulin OS=Anas platyrhynchos GN=CALM PE=2 SV=2)

HSP 1 Score: 85.5001 bits (210), Expect = 4.012e-16
Identity = 58/156 (37.18%), Postives = 80/156 (51.28%), Query Frame = 1 
Query:  283 AELKRVFATFDKDGDGFITKTELVESLRNLRLMVTDMEAEEMVAKVDANGDGLIEFDEF-CMLYEGMMGGDRQEKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGLISVEELGLVLSALGLNEGNKIENCKKMIRKVDVDGDGMVNFDEFRRMMKA 747
            AE K  F+ FDKDGDG IT  EL   +R+L    T+ E ++M+ +VDA+G+G I+F EF  M+   M   D +E+                             G IS  EL  V++ LG  E    E   +MIR+ D+DGDG VN++EF +MM A
Sbjct:   11 AEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEE----------------IREAFRVFDKDGNGYISAAELRHVMTNLG--EKLTDEEVDEMIREADIDGDGQVNYEEFVQMMTA 148
[Close]
BLAST of CK933981 vs. ExPASy Swiss-Prot
Match: CALM_METSE (Calmodulin OS=Metridium senile PE=1 SV=3)

HSP 1 Score: 85.1149 bits (209), Expect = 5.240e-16
Identity = 57/154 (37.01%), Postives = 79/154 (51.30%), Query Frame = 1 
Query:  283 AELKRVFATFDKDGDGFITKTELVESLRNLRLMVTDMEAEEMVAKVDANGDGLIEFDEF-CMLYEGMMGGDRQEKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGLISVEELGLVLSALGLNEGNKIENCKKMIRKVDVDGDGMVNFDEFRRMM 741
            AE K  F+ FDKDGDG IT  EL   +R+L    T+ E ++M+ +VDA+G+G I+F EF  M+   M   D +E+                             G IS  EL  V++ LG  E    E   +MIR+ D+DGDG VN++EF +MM
Sbjct:   11 AEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEE----------------IREAFRVFDKDGNGFISAAELRHVMTNLG--EKLTDEEVDEMIREADIDGDGQVNYEEFVKMM 146
[Close]
BLAST of CK933981 vs. ExPASy Swiss-Prot
Match: CALM_CIOIN (Calmodulin OS=Ciona intestinalis PE=2 SV=3)

HSP 1 Score: 84.7297 bits (208), Expect = 6.844e-16
Identity = 58/154 (37.66%), Postives = 78/154 (50.65%), Query Frame = 1 
Query:  283 AELKRVFATFDKDGDGFITKTELVESLRNLRLMVTDMEAEEMVAKVDANGDGLIEFDEF-CMLYEGMMGGDRQEKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGLISVEELGLVLSALGLNEGNKIENCKKMIRKVDVDGDGMVNFDEFRRMM 741
            AE K  F+ FDKDGDG IT  EL   +R+L    T+ E ++M+ +VDA+G+G I+F EF  M+   M   D +E+                             G IS  EL  V++ LG  E    E   +MIR+ DVDGDG VN++EF  MM
Sbjct:   11 AEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEE----------------IREAFRVFDKDGNGFISAAELRHVMTNLG--EKLTDEEVDEMIREADVDGDGQVNYEEFVNMM 146
[Close]
BLAST of CK933981 vs. ExPASy Swiss-Prot
Match: CALM_PYTSP (Calmodulin OS=Pythium splendens PE=2 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 8.938e-16
Identity = 55/154 (35.71%), Postives = 79/154 (51.30%), Query Frame = 1 
Query:  283 AELKRVFATFDKDGDGFITKTELVESLRNLRLMVTDMEAEEMVAKVDANGDGLIEFDEF-CMLYEGMMGGDRQEKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGLISVEELGLVLSALGLNEGNKIENCKKMIRKVDVDGDGMVNFDEFRRMM 741
            AE K  F+ FDKDGDG IT  EL   +R+L    T+ E ++M+ +VDA+G+G I+F EF  M+   M   D +E+                             G IS  EL  +++ LG  E    E   +MIR+ D+DGDG +N++EF +MM
Sbjct:   11 AEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEE----------------ILEAFKVFDKDGNGFISAAELRHIMTNLG--EKLTDEEVDEMIREADIDGDGQINYEEFVKMM 146
The following BLAST results are available for this feature:
BLAST of CK933981 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 110
Match NameE-valueIdentityDescription
CALM_HUMAN4.012e-1637.18Calmodulin OS=Homo sapiens GN=CALM1 PE=1 SV=2[more]
CALM_GECJA4.012e-1637.18Calmodulin OS=Gecko japonicus GN=GekBS194P PE=2 SV... [more]
CALM_DANRE4.012e-1637.18Calmodulin OS=Danio rerio GN=calm1a PE=2 SV=3[more]
CALM_CTEID4.012e-1637.18Calmodulin OS=Ctenopharyngodon idella GN=calm PE=2... [more]
CALM_CHICK4.012e-1637.18Calmodulin OS=Gallus gallus GN=CALM PE=1 SV=2[more]
CALM_BOVIN4.012e-1637.18Calmodulin OS=Bos taurus GN=CALM PE=1 SV=2[more]
CALM_ANAPL4.012e-1637.18Calmodulin OS=Anas platyrhynchos GN=CALM PE=2 SV=2[more]
CALM_METSE5.240e-1637.01Calmodulin OS=Metridium senile PE=1 SV=3[more]
CALM_CIOIN6.844e-1637.66Calmodulin OS=Ciona intestinalis PE=2 SV=3[more]
CALM_PYTSP8.938e-1635.71Calmodulin OS=Pythium splendens PE=2 SV=1[more]

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Properties
Property NameValue
Genbank descriptionCGF1004542_G09 Developing fruit peel at 38 DAFB Citrus sinensis cDNA clone P38DAB10001_IVF_G09 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK933981 ID=CK933981; Name=CK933981; organism=Citrus sinensis; type=EST; length=832bp
GGGGATCGAAGGGCAACATCACACACACTAGCTAGTTAATTGGTTTCTCC
TTAATTGCCTCAGTTAACATCTCTCCTTTGTTGCTCTAAGGTAACAAAGA
AGATGGTGGTATCGATATTGTTATTAGCAGTTCTGTTCATTGCCGGCTTC
ATTAATATTTTCGTTTACTTCCCCACCAAGAAGTTTTATGCATGGATCCA
ATCTTTCTTCAGCAAAACGGCTACTACTACTGGTGAATCCCGAGTTTCGT
CGCCAGGCAAAGAGACGAGTGCATACAAGAAAGCTGAGCTCAAGAGGGTA
TTTGCGACTTTTGACAAAGACGGCGACGGATTCATAACAAAGACGGAGCT
TGTAGAGTCGCTACGGAACCTAAGGCTGATGGTTACCGACATGGAAGCCG
AAGAAATGGTTGCAAAAGTTGATGCTAATGGAGATGGGCTGATTGAGTTT
GATGAGTTTTGCATGTTGTACGAGGGCATGATGGGTGGAGATCGCCAGGA
AAAGGGCGGCGCCGGAGATGGGGAAGGTGGTGGTGCCGATGAAGGCGATG
ATTTGAAGGACGCTTTTGATGTGTTTGATAAAGATAAAGATGGGTTGATT
TCAGTGGAGGAGTTGGGGTTAGTGTTGTCTGCCTTAGGGTTAAATGAAGG
TAACAAGATTGAAAATTGTAAAAAGATGATTAGGAAAGTTGACGTGGACG
GTGACGGGATGGTTAATTTTGATGAGTTTAGGAGGATGATGAAGGCTGGA
GGAGGGCTTCTTACAGCCTTTTGAGTCTCTGTGATTCCAAGTTCACTGCG
TACAGAACAGAGATTGTACATACAACAATAAT
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