CK933981

Overview
NameCK933981
Unique NameCK933981
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length832
Libraries
Library NameType
Developing fruit peel at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK933981 vs. ExPASy Swiss-Prot
Match: CALMS_CHICK (Calmodulin, striated muscle OS=Gallus gallus GN=CCM1 PE=3 SV=2)

HSP 1 Score: 78.1814 bits (191), Expect = 6.406e-14
Identity = 54/153 (35.29%), Postives = 73/153 (47.71%), Query Frame = 1
Query:  283 AELKRVFATFDKDGDGFITKTELVESLRNLRLMVTDMEAEEMVAKVDANGDGLIEFDEFCMLYEGMMGGDRQEKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGLISVEELGLVLSALGLNEGNKIENCKKMIRKVDVDGDGMVNFDEFRRMM 741
            AE K  F+ FD+DGDG IT  EL   +R+L    T+ E ++MV +VDA+G G I+F EF  L    M     E+                             G IS  EL  V++ LG  E    E   +MI++ D + DG VN++EF RMM
Sbjct:   11 AEFKEAFSLFDRDGDGCITTMELGTVMRSLGQNPTEAELQDMVGEVDADGSGTIDFPEFLSLMARKMRDSDSEE---------------EIREAFRVFDKDGNGYISAAELRHVMTNLG--EKLTDEEVDEMIKEADCNNDGQVNYEEFVRMM 146          
BLAST of CK933981 vs. ExPASy Swiss-Prot
Match: CALL3_RAT (Calmodulin-like protein 3 OS=Rattus norvegicus GN=Calml3 PE=2 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 8.366e-14
Identity = 52/154 (33.77%), Postives = 75/154 (48.70%), Query Frame = 1
Query:  283 AELKRVFATFDKDGDGFITKTELVESLRNLRLMVTDMEAEEMVAKVDANGDGLIEFDEF-CMLYEGMMGGDRQEKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGLISVEELGLVLSALGLNEGNKIENCKKMIRKVDVDGDGMVNFDEFRRMM 741
            AE K  F+ FDKDGDG IT  EL   +R+L    T+ E ++MV ++D +G+G ++F EF  M+   M   D +E+                             G +S  EL  V++ LG  E    E   +MI+  D DGDG VN++EF  M+
Sbjct:   11 AEFKEAFSLFDKDGDGCITTQELGTVMRSLGQNPTEAELQDMVNEIDKDGNGTVDFPEFLTMMSRKMKDTDSEEE----------------IREAFRVFDKDGNGFVSAAELRHVMTRLG--EKLSDEEVDEMIQAADTDGDGQVNYEEFVHML 146          
BLAST of CK933981 vs. ExPASy Swiss-Prot
Match: CALL3_HUMAN (Calmodulin-like protein 3 OS=Homo sapiens GN=CALML3 PE=1 SV=2)

HSP 1 Score: 77.7962 bits (190), Expect = 8.366e-14
Identity = 51/153 (33.33%), Postives = 75/153 (49.02%), Query Frame = 1
Query:  286 ELKRVFATFDKDGDGFITKTELVESLRNLRLMVTDMEAEEMVAKVDANGDGLIEFDEFC-MLYEGMMGGDRQEKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGLISVEELGLVLSALGLNEGNKIENCKKMIRKVDVDGDGMVNFDEFRRMM 741
            E K  F+ FDKDGDG IT  EL   +R+L    T+ E  +M++++D +G+G ++F EF  M+   M   D +E+                             G +S  EL  V++ LG  E    E   +MIR  D DGDG VN++EF R++
Sbjct:   12 EFKEAFSLFDKDGDGCITTRELGTVMRSLGQNPTEAELRDMMSEIDRDGNGTVDFPEFLGMMARKMKDTDNEEE----------------IREAFRVFDKDGNGFVSAAELRHVMTRLG--EKLSDEEVDEMIRAADTDGDGQVNYEEFVRVL 146          
BLAST of CK933981 vs. ExPASy Swiss-Prot
Match: CML1_ARATH (Calmodulin-like protein 1 OS=Arabidopsis thaliana GN=CML1 PE=2 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 1.427e-13
Identity = 61/181 (33.70%), Postives = 86/181 (47.51%), Query Frame = 1
Query:  208 FSKTATTTGESRVSSPGKETSAYKKA-ELKRVFATFDKDGDGFITKTELVESLRNLRLMVTDMEAEEMVAKVDANGDGLIEFDEFCMLYEGMMGGDRQEKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGLISVEELGLVLSALGLNEGNKIENCKKMIRKVDVDGDGMVNFDEFRRMMKA 747
            FS+   ++G   +SSPG    +     E++RVF+ FD D DG I++TE    LR L       +  ++   VD +GDG I+F EF   Y+   GG R                                G IS EE+  VL  LG  E   +E+C +M+R VD DGDG+VN +EF +MM +
Sbjct:   26 FSRDRQSSG---LSSPGPGGFSQPSVNEMRRVFSRFDLDKDGKISQTEYKVVLRALGQERAIEDVPKIFKAVDLDGDGFIDFREFIDAYK-RSGGIRSSDIRNSFWTFDLNGD----------------GKISAEEVMSVLWKLG--ERCSLEDCNRMVRAVDADGDGLVNMEEFIKMMSS 184          
BLAST of CK933981 vs. ExPASy Swiss-Prot
Match: CML19_ORYSJ (Putative calcium-binding protein CML19 OS=Oryza sativa subsp. japonica GN=CML19 PE=3 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 1.864e-13
Identity = 53/158 (33.54%), Postives = 81/158 (51.27%), Query Frame = 1
Query:  283 AELKRVFATFDKDGDGFITKTELVESLRNLRLMVTDMEAEE---MVAKVDANGDGLIEFDEFCMLYEGMMGGDRQEKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGLISVEELGLVLSALGLNEGNKIENCKKMIRKVDVDGDGMVNFDEFRRMMKA 747
            AE +RVF+ FD+D DG I+  EL   ++    +  DM AEE   +V+  D + DGL++ +EF  L   +  GD +E+                             G I+   L  +LS LG ++G  IE C+ MI + D+DGDG+++F+EF+ MM A
Sbjct:    6 AEFRRVFSAFDRDADGKISAAELRLCMK--AALGEDMSAEEAEALVSSADTDDDGLLDEEEFTKLAVQLEMGDEEER-------------CRGLMEAFRMYEMEGEGRITPASLKRMLSKLGSHQG--IEECQTMICRFDLDGDGVISFEEFKIMMDA 146          
BLAST of CK933981 vs. ExPASy Swiss-Prot
Match: CATR_ATRNU (Caltractin OS=Atriplex nummularia PE=2 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 1.864e-13
Identity = 51/156 (32.69%), Postives = 74/156 (47.44%), Query Frame = 1
Query:  277 KKAELKRVFATFDKDGDGFITKTELVESLRNLRLMVTDMEAEEMVAKVDANGDGLIEFDEFCMLYEGMMGGDRQEKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGLISVEELGLVLSALGLNEGNKIENCKKMIRKVDVDGDGMVNFDEFRRMMK 744
            K+ E+K  F  FD DG G I   EL  ++R L   +T+ +  +M+A VD +G G I+FDEFC +    + G+R  K                             G IS E++  +   LG  E   +++ + MI + D D DG VN +EF RMMK
Sbjct:   23 KRQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEQINQMIADVDKDGSGAIDFDEFCHMMTAKI-GERDTK--------------EELMKAFRIIDQDNNGKISPEDIQRIAKELG--ENFTVKDIQDMIEEADRDRDGEVNVEEFLRMMK 161          
BLAST of CK933981 vs. ExPASy Swiss-Prot
Match: CALL_CAEEL (Calmodulin-like protein OS=Caenorhabditis elegans GN=cal-1 PE=2 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 1.864e-13
Identity = 48/152 (31.58%), Postives = 76/152 (50.00%), Query Frame = 1
Query:  286 ELKRVFATFDKDGDGFITKTELVESLRNLRLMVTDMEAEEMVAKVDANGDGLIEFDEFCMLYEGMMGGDRQEKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGLISVEELGLVLSALGLNEGNKIENCKKMIRKVDVDGDGMVNFDEFRRMM 741
            E +  F  FDKDG+G I+  EL  ++R+L    T+ E  EM+ +VD +G+G IEF EFC++ + MM     E                              G+I+ +E    +  +G+      E   +MI++VDVDGDG ++++EF +MM
Sbjct:   25 EFREAFMMFDKDGNGTISTKELGIAMRSLGQNPTEQEILEMINEVDIDGNGQIEFPEFCVMMKRMMKETDSE----------------MIREAFRVFDKDGNGVITAQEFRYFMVHMGMQFSE--EEVDEMIKEVDVDGDGEIDYEEFVKMM 158          
BLAST of CK933981 vs. ExPASy Swiss-Prot
Match: CML16_ORYSJ (Probable calcium-binding protein CML16 OS=Oryza sativa subsp. japonica GN=CML16 PE=2 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 2.434e-13
Identity = 52/157 (33.12%), Postives = 75/157 (47.77%), Query Frame = 1
Query:  283 AELKRVFATFDKDGDGFITKTELVESLRNLRLMVTDM----EAEEMVAKVDANGDGLIEFDEFCMLYEGMMGGDRQEKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGLISVEELGLVLSALGLNEGNKIENCKKMIRKVDVDGDGMVNFDEFRRMM 741
            AE++RVF  FD DGDG I+ +EL    R +    ++     E   M+ ++D + DG ++  EF   + G   GD + +                             G I+  ELG VL  +G  EG   E C++MI  VDVDGDG V F+EF++MM
Sbjct:   26 AEIERVFTRFDADGDGRISPSELAAVTRAIAPPPSESAGGREVAAMMNELDTDRDGFVDLGEFAA-FHGRGRGDAEHEAELRAAFDVYDVDGD--------------GRITAAELGKVLGRIG--EGCSAEECERMIASVDVDGDGCVGFEEFKKMM 165          
BLAST of CK933981 vs. ExPASy Swiss-Prot
Match: CALL3_MOUSE (Calmodulin-like protein 3 OS=Mus musculus GN=Calml3 PE=2 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 2.434e-13
Identity = 52/154 (33.77%), Postives = 74/154 (48.05%), Query Frame = 1
Query:  283 AELKRVFATFDKDGDGFITKTELVESLRNLRLMVTDMEAEEMVAKVDANGDGLIEFDEF-CMLYEGMMGGDRQEKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGLISVEELGLVLSALGLNEGNKIENCKKMIRKVDVDGDGMVNFDEFRRMM 741
            AE K  F+ FDKDGDG IT  EL   +R+L    T+ E + MV ++D +G+G ++F EF  M+   M   D +E+                             G +S  EL  V++ LG  E    E   +MI+  D DGDG VN++EF  M+
Sbjct:   11 AEFKEAFSLFDKDGDGSITTQELGTVMRSLGQNPTEAELQGMVNEIDKDGNGTVDFPEFLTMMSRKMKDTDSEEE----------------IREAFRVFDKDGNGFVSAAELRHVMTKLG--EKLSDEEVDEMIQAADTDGDGQVNYEEFVHML 146          
BLAST of CK933981 vs. ExPASy Swiss-Prot
Match: CML37_ARATH (Calcium-binding protein CML37 OS=Arabidopsis thaliana GN=CML37 PE=2 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 3.179e-13
Identity = 55/170 (32.35%), Postives = 77/170 (45.29%), Query Frame = 1
Query:  235 ESRVSSPGKETSAYKKAELKRVFATFDKDGDGFITKTELVESLRNLRLMVTDMEAEEMVAKVDANGDGLIEFDEFCMLYEGMMGGDRQEKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGLISVEELGLVLSALGLNEGNKIENCKKMIRKVDVDGDGMVNFDEFRRMMK 744
            ESR SS    +S+    EL+ VF   D + DG I+  EL   +  L   ++  E EE+V   D +GDG I+F+EF  L EG  G D + +                               I+   L   LS LG  E   ++ CK MIR  D + DG+++FDEF  MM+
Sbjct:   32 ESRTSSNSSGSSSLNVNELRTVFDYMDANSDGKISGEELQSCVSLLGGALSSREVEEVVKTSDVDGDGFIDFEEFLKLMEGEDGSDEERRKELKEAFGMYVMEGEE--------------FITAASLRRTLSRLG--ESCTVDACKVMIRGFDQNDDGVLSFDEFVLMMR 185          
The following BLAST results are available for this feature:
BLAST of CK933981 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 110
Match NameE-valueIdentityDescription
CALMS_CHICK6.406e-1435.29Calmodulin, striated muscle OS=Gallus gallus GN=CC... [more]
CALL3_RAT8.366e-1433.77Calmodulin-like protein 3 OS=Rattus norvegicus GN=... [more]
CALL3_HUMAN8.366e-1433.33Calmodulin-like protein 3 OS=Homo sapiens GN=CALML... [more]
CML1_ARATH1.427e-1333.70Calmodulin-like protein 1 OS=Arabidopsis thaliana ... [more]
CML19_ORYSJ1.864e-1333.54Putative calcium-binding protein CML19 OS=Oryza sa... [more]
CATR_ATRNU1.864e-1332.69Caltractin OS=Atriplex nummularia PE=2 SV=1[more]
CALL_CAEEL1.864e-1331.58Calmodulin-like protein OS=Caenorhabditis elegans ... [more]
CML16_ORYSJ2.434e-1333.12Probable calcium-binding protein CML16 OS=Oryza sa... [more]
CALL3_MOUSE2.434e-1333.77Calmodulin-like protein 3 OS=Mus musculus GN=Calml... [more]
CML37_ARATH3.179e-1332.35Calcium-binding protein CML37 OS=Arabidopsis thali... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004542_G09 Developing fruit peel at 38 DAFB Citrus sinensis cDNA clone P38DAB10001_IVF_G09 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK933981 ID=CK933981; Name=CK933981; organism=Citrus sinensis; type=EST; length=832bp
GGGGATCGAAGGGCAACATCACACACACTAGCTAGTTAATTGGTTTCTCC
TTAATTGCCTCAGTTAACATCTCTCCTTTGTTGCTCTAAGGTAACAAAGA
AGATGGTGGTATCGATATTGTTATTAGCAGTTCTGTTCATTGCCGGCTTC
ATTAATATTTTCGTTTACTTCCCCACCAAGAAGTTTTATGCATGGATCCA
ATCTTTCTTCAGCAAAACGGCTACTACTACTGGTGAATCCCGAGTTTCGT
CGCCAGGCAAAGAGACGAGTGCATACAAGAAAGCTGAGCTCAAGAGGGTA
TTTGCGACTTTTGACAAAGACGGCGACGGATTCATAACAAAGACGGAGCT
TGTAGAGTCGCTACGGAACCTAAGGCTGATGGTTACCGACATGGAAGCCG
AAGAAATGGTTGCAAAAGTTGATGCTAATGGAGATGGGCTGATTGAGTTT
GATGAGTTTTGCATGTTGTACGAGGGCATGATGGGTGGAGATCGCCAGGA
AAAGGGCGGCGCCGGAGATGGGGAAGGTGGTGGTGCCGATGAAGGCGATG
ATTTGAAGGACGCTTTTGATGTGTTTGATAAAGATAAAGATGGGTTGATT
TCAGTGGAGGAGTTGGGGTTAGTGTTGTCTGCCTTAGGGTTAAATGAAGG
TAACAAGATTGAAAATTGTAAAAAGATGATTAGGAAAGTTGACGTGGACG
GTGACGGGATGGTTAATTTTGATGAGTTTAGGAGGATGATGAAGGCTGGA
GGAGGGCTTCTTACAGCCTTTTGAGTCTCTGTGATTCCAAGTTCACTGCG
TACAGAACAGAGATTGTACATACAACAATAAT
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