CK933990

Overview
NameCK933990
Unique NameCK933990
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length901
Libraries
Library NameType
Developing fruit peel at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig7528 contig Csv1_Contig7528:19..919. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CK933990 vs. ExPASy Swiss-Prot
Match: AQP4_DIPME (Aquaporin-4 OS=Dipodomys merriami GN=AQP4 PE=2 SV=1)

HSP 1 Score: 132.494 bits (332), Expect = 3.237e-30
Identity = 81/219 (36.99%), Postives = 116/219 (52.97%), Query Frame = 1
Query:  241 SFYRALIAEFIAXXXXXXXXXXXXIGYKSQTDPAKNVDGCAGVGILGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAISGVGLVKAFQKSYYTRYGGGANELADGYSTGVGLAAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSLGAAVIYNKDEAWDDQWLFWVG 897
            +F++A+ AEF+A            I +  + +P         V ++ I+  FG  I  +V C   ISGGHINPAVT  +   RK+S+ ++V Y+ AQCLGAI G G++           G G   +    + G GL  E+I TF LV+T+F++ D KR    + V     L IGF+V + HL  I  TG  +NPARS G AVI      W++ W++WVG
Sbjct:   33 AFWKAVTAEFLAMLIFVLLSLGSTINWGGKENPLP-------VDMVLISLCFGLSIATMVQCFGHISGGHINPAVTVAMVCTRKISIAKSVFYIAAQCLGAIIGAGILYLVTPPSVVG-GLGVTTVHGNLTAGHGLLVELIITFQLVFTIFASCDSKR----TDVTGSIALAIGFSVAIGHLFAINYTGASMNPARSFGPAVIMGN---WENHWIYWVG 236          
BLAST of CK933990 vs. ExPASy Swiss-Prot
Match: AQP4_NOTAL (Aquaporin-4 OS=Notomys alexis GN=AQP4 PE=2 SV=1)

HSP 1 Score: 132.109 bits (331), Expect = 4.228e-30
Identity = 81/219 (36.99%), Postives = 115/219 (52.51%), Query Frame = 1
Query:  241 SFYRALIAEFIAXXXXXXXXXXXXIGYKSQTDPAKNVDGCAGVGILGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAISGVGLVKAFQKSYYTRYGGGANELADGYSTGVGLAAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSLGAAVIYNKDEAWDDQWLFWVG 897
            +F++A+ AEF+A            I +    +P         V ++ I+  FG  I  +V C   ISGGHINPAVT  +   RK+S+ ++V Y+ AQCLGAI G G++           G G   +    + G GL  E+I TF LV+T+F++ D KR    + V     L IGF+V + HL  I  TG  +NPARS G AVI      W++ W++WVG
Sbjct:   36 AFWKAVTAEFLAMLIFVLLSVGSTINWGGSENPLP-------VDMVLISLCFGLSIATMVQCFGHISGGHINPAVTVAMVCTRKISIAKSVFYITAQCLGAIIGAGILYLVTPPNVVG-GLGVTTVHGNLTAGHGLLVELIITFQLVFTIFASCDSKR----TDVTGSIALAIGFSVAIGHLFAINYTGASMNPARSFGPAVIMGN---WENHWIYWVG 239          
BLAST of CK933990 vs. ExPASy Swiss-Prot
Match: AQP4_MOUSE (Aquaporin-4 OS=Mus musculus GN=Aqp4 PE=2 SV=2)

HSP 1 Score: 131.339 bits (329), Expect = 7.211e-30
Identity = 81/219 (36.99%), Postives = 115/219 (52.51%), Query Frame = 1
Query:  241 SFYRALIAEFIAXXXXXXXXXXXXIGYKSQTDPAKNVDGCAGVGILGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAISGVGLVKAFQKSYYTRYGGGANELADGYSTGVGLAAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSLGAAVIYNKDEAWDDQWLFWVG 897
            +F++A+ AEF+A            I +    +P         V ++ I+  FG  I  +V C   ISGGHINPAVT  +   RK+S+ ++V Y++AQCLGAI G G++           G G   +    + G GL  E+I TF LV+T+F++ D KR    + V     L IGF+V + HL  I  TG  +NPARS G AVI      W + W++WVG
Sbjct:   33 AFWKAVSAEFLATLIFVLLGVGSTINWGGSENPLP-------VDMVLISLCFGLSIATMVQCFGHISGGHINPAVTVAMVCTRKISIAKSVFYIIAQCLGAIIGAGILYLVTPPSVVG-GLGVTTVHGNLTAGHGLLVELIITFQLVFTIFASCDSKR----TDVTGSIALAIGFSVAIGHLFAINYTGASMNPARSFGPAVIMGN---WANHWIYWVG 236          
BLAST of CK933990 vs. ExPASy Swiss-Prot
Match: AQP4_HUMAN (Aquaporin-4 OS=Homo sapiens GN=AQP4 PE=1 SV=2)

HSP 1 Score: 130.568 bits (327), Expect = 1.230e-29
Identity = 81/219 (36.99%), Postives = 114/219 (52.05%), Query Frame = 1
Query:  241 SFYRALIAEFIAXXXXXXXXXXXXIGYKSQTDPAKNVDGCAGVGILGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAISGVGLVKAFQKSYYTRYGGGANELADGYSTGVGLAAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSLGAAVIYNKDEAWDDQWLFWVG 897
            +F++A+ AEF+A            I +     P         V ++ I+  FG  I  +V C   ISGGHINPAVT  +   RK+S+ ++V Y+ AQCLGAI G G++           G G   +    + G GL  E+I TF LV+T+F++ D KR    + V     L IGF+V + HL  I  TG  +NPARS G AVI      W++ W++WVG
Sbjct:   33 AFWKAVTAEFLAMLIFVLLSLGSTINWGGTEKPLP-------VDMVLISLCFGLSIATMVQCFGHISGGHINPAVTVAMVCTRKISIAKSVFYIAAQCLGAIIGAGILYLVTPPSVVG-GLGVTMVHGNLTAGHGLLVELIITFQLVFTIFASCDSKR----TDVTGSIALAIGFSVAIGHLFAINYTGASMNPARSFGPAVIMGN---WENHWIYWVG 236          
BLAST of CK933990 vs. ExPASy Swiss-Prot
Match: AQP4_BOVIN (Aquaporin-4 OS=Bos taurus GN=AQP4 PE=2 SV=3)

HSP 1 Score: 128.642 bits (322), Expect = 4.674e-29
Identity = 80/219 (36.53%), Postives = 113/219 (51.60%), Query Frame = 1
Query:  241 SFYRALIAEFIAXXXXXXXXXXXXIGYKSQTDPAKNVDGCAGVGILGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAISGVGLVKAFQKSYYTRYGGGANELADGYSTGVGLAAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSLGAAVIYNKDEAWDDQWLFWVG 897
            +F++A+ AEF+A            I +     P         V ++ I+  FG  I  +V C   ISGGHINPAVT  +   R++S+ ++V Y+ AQCLGAI G G++           G G   +    S G GL  E+I TF LV+T+F++ D KR    + V     L IG +V + HL  I  TG  +NPARS G AVI      W++ W++WVG
Sbjct:   33 TFWKAVTAEFLAMLIFVLLSLGSTINWGGAEKPLP-------VDMVLISLCFGLSIATMVQCFGHISGGHINPAVTVAMVCTRRISIAKSVFYIAAQCLGAIIGAGILYLVTPPSVVG-GLGVTTVHGNLSAGHGLLVELIITFQLVFTIFASCDSKR----TDVTGSIALAIGISVAIGHLFAINYTGASMNPARSFGPAVIMGN---WENHWIYWVG 236          
BLAST of CK933990 vs. ExPASy Swiss-Prot
Match: AQP_AEDAE (Aquaporin AQPAe.a OS=Aedes aegypti GN=AAEL003512 PE=2 SV=2)

HSP 1 Score: 124.02 bits (310), Expect = 1.151e-27
Identity = 74/219 (33.79%), Postives = 110/219 (50.23%), Query Frame = 1
Query:  241 SFYRALIAEFIAXXXXXXXXXXXXIGYKSQTDPAKNVDGCAGVGILGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAISGVGLVKAFQKSYYTRYGGGANELADGYSTGVGLAAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSLGAAVIYNKDEAWDDQWLFWVG 897
            + +R L+AEF+             +G+     P           +  IA+ FG ++  L      +SG HINPAVT GL +   +S+++   Y+V+QC+GAI+G  L+KA   S     G G   +    + G G+  E + TF+LV+ V    D +R    S +   APL IG ++   HL+ I  TG  +NPARS G AV+      W DQW++WVG
Sbjct:   21 NIWRMLVAEFLGTFFLVSIGIGSTMGWGGDYAPT----------MTQIAFTFGLVVATLAQAFGHVSGCHINPAVTIGLMITADISILKGAFYIVSQCVGAIAGAALIKAATPSDVIG-GLGVTGIDPRLTAGQGVMIEALITFILVFVVHGVCDNRR----SDIKGSAPLAIGLSITAGHLSAIKYTGASMNPARSFGPAVVMGN---WTDQWVYWVG 221          
BLAST of CK933990 vs. ExPASy Swiss-Prot
Match: AQP_ANOGA (Aquaporin AQPAn.G OS=Anopheles gambiae GN=AGAP008842 PE=3 SV=4)

HSP 1 Score: 123.635 bits (309), Expect = 1.504e-27
Identity = 70/172 (40.70%), Postives = 98/172 (56.98%), Query Frame = 1
Query:  382 IAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAISGVGLVKAFQKSYYTRYGGGANELADGYSTGVGLAAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSLGAAVIYNKDEAWDDQWLFWVG 897
            IA+ FG ++  L      +SG HINPAVT GL +   VS+++   Y+V+QC+GAI+G  ++KA   S     G G   +A G STG G+  E + TF+LV+ V    D +R    + V   APL IG ++   HLA I  TG  +NPARS G AV+      + D W++WVG
Sbjct:   57 IAFTFGLVVATLAQAFGHVSGCHINPAVTIGLIVTADVSILKGAFYIVSQCIGAIAGAAVIKAATPSEVVG-GLGVTGIAPGLSTGQGVLIEALITFMLVFVVHGVCDNRR----TDVKGSAPLAIGLSITAGHLAAIKYTGASMNPARSFGPAVVMGN---YTDLWVYWVG 220          
BLAST of CK933990 vs. ExPASy Swiss-Prot
Match: TIP1_MEDTR (Probable aquaporin TIP-type OS=Medicago truncatula GN=AQP1 PE=1 SV=1)

HSP 1 Score: 122.094 bits (305), Expect = 4.375e-27
Identity = 80/226 (35.40%), Postives = 117/226 (51.77%), Query Frame = 1
Query:  226 ELTKWSFYRALIAEFIAXXXXXXXXXXXXIGYKSQTDPAKNVDGCAG-VGILGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAISGVGLVKAFQKSYYTRYGGGANELADGYSTGVGLAAEIIGTFVLVYTVF-SATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSLGAAVIYNKDEAWDDQWLFWVG 897
            E T     +A +AEFI+            I Y   T+     DG A   G++  + A    +FV V   A ISGGH+NPAVTFG F+   ++L+R ++Y++AQ LG+I    L+     S    +G     L++G   G  L  EI+ TF LVYTV+ +A DPK+     ++ ++AP+ IGF V    L     TG  +NPA S G AV+     +W + W++W G
Sbjct:   13 EATHPDTLKAGLAEFISTFIFVFAGSGSGIAYNKLTN-----DGAATPAGLISASIAHAFALFVAVSVGANISGGHVNPAVTFGAFVGGNITLLRGIVYIIAQLLGSIVASALLVFVTASSVPAFG-----LSEGVGVGPALVLEIVMTFGLVYTVYATAVDPKK----GNIGIIAPIAIGFIVGANILVGGAFTGASMNPAVSFGPAVV---SWSWSNHWVYWAG 221          
BLAST of CK933990 vs. ExPASy Swiss-Prot
Match: AQP5_PIG (Aquaporin-5 OS=Sus scrofa GN=AQP5 PE=2 SV=1)

HSP 1 Score: 121.324 bits (303), Expect = 7.463e-27
Identity = 81/225 (36.00%), Postives = 115/225 (51.11%), Query Frame = 1
Query:  226 ELTKWSFYRALIAEFIAXXXXXXXXXXXXIGYKSQTDPAKNVDGCAGVGILGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAISGVGLVKAFQKSYYTRYGGGANELADGYSTGVGLAAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAP-LPIGFAVFMVHLATIPITGTGINPARSLGAAVIYNKDEAWDDQWLFWVG 897
            E+   +F +A+ AEF+A            + + S               IL IA AFG  I  L      +SGGHINPA+T  L +  ++SL+RAV Y+VAQ +GAI+G G++         R     N L +  + G  +  E+I TF L   +FS+TD +R++     PV +P L IG +V + HL  I  TG  +NPARS G AV+ N+       W+FWVG
Sbjct:    4 EVCSLAFLKAVFAEFLATLIFVFFGLASALKWPSALPT-----------ILQIALAFGLAIGTLAQALGPVSGGHINPAITLALLVGNQISLLRAVFYVVAQLVGAIAGAGILYGLAPG-NARGNLAVNSLNNNTTPGQAVVVEMILTFQLALCIFSSTDSRRTS-----PVGSPALSIGLSVTLGHLVGIYFTGCSMNPARSFGPAVVMNRFS--PSHWVFWVG 209          
BLAST of CK933990 vs. ExPASy Swiss-Prot
Match: AQP_CICVR (Aquaporin AQPcic OS=Cicadella viridis GN=AQP PE=1 SV=1)

HSP 1 Score: 120.939 bits (302), Expect = 9.747e-27
Identity = 70/186 (37.63%), Postives = 103/186 (55.38%), Query Frame = 1
Query:  358 CAGVGI------LGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAISGVGLVKAFQKSYYTRYGGGANELADGYSTGVGLAAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSLGAAVIYNKDEAWDDQWLFWVG 897
            C GV I      + IA  FG +I  +V C   +SG HINPAVT GL +   +S+++A+ Y++ QC+GAI+G  ++K    + + R       LA G +  +G   E   TFVL+  V S  D +R     ++   AP+ +G A+   HLA I  TG+ +NPARS G AV  N D+ W + W++W G
Sbjct:   47 CTGVQISEGDVVVRIALTFGFIIATMVQCIGHVSGCHINPAVTCGLLVTGHISILKAIFYIIVQCVGAIAGSAILKVITPAEF-RGTLCMTSLAPGVTPPMGFLVEACITFVLILLVQSVCDDRR----KNLGNAAPVAVGLAITCCHLAAIKYTGSSMNPARSFGPAV--NGDDNWANHWVYWAG 225          
The following BLAST results are available for this feature:
BLAST of CK933990 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 182
Match NameE-valueIdentityDescription
AQP4_DIPME3.237e-3036.99Aquaporin-4 OS=Dipodomys merriami GN=AQP4 PE=2 SV=... [more]
AQP4_NOTAL4.228e-3036.99Aquaporin-4 OS=Notomys alexis GN=AQP4 PE=2 SV=1[more]
AQP4_MOUSE7.211e-3036.99Aquaporin-4 OS=Mus musculus GN=Aqp4 PE=2 SV=2[more]
AQP4_HUMAN1.230e-2936.99Aquaporin-4 OS=Homo sapiens GN=AQP4 PE=1 SV=2[more]
AQP4_BOVIN4.674e-2936.53Aquaporin-4 OS=Bos taurus GN=AQP4 PE=2 SV=3[more]
AQP_AEDAE1.151e-2733.79Aquaporin AQPAe.a OS=Aedes aegypti GN=AAEL003512 P... [more]
AQP_ANOGA1.504e-2740.70Aquaporin AQPAn.G OS=Anopheles gambiae GN=AGAP0088... [more]
TIP1_MEDTR4.375e-2735.40Probable aquaporin TIP-type OS=Medicago truncatula... [more]
AQP5_PIG7.463e-2736.00Aquaporin-5 OS=Sus scrofa GN=AQP5 PE=2 SV=1[more]
AQP_CICVR9.747e-2737.63Aquaporin AQPcic OS=Cicadella viridis GN=AQP PE=1 ... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004542_G01 Developing fruit peel at 38 DAFB Citrus sinensis cDNA clone P38DAB10001_IVF_G01 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK933990 ID=CK933990; Name=CK933990; organism=Citrus sinensis; type=EST; length=901bp
GGGGATACCNNNAACAAGCAAAAAAAAAGAAAAAGAAAAAGAAAAAGGAA
AAGGCTTCTCTCTCGTTGTGCTTGTGGCTTTGCAGTGCTCTCAGTTTTCT
CTGTTTCTCTCCAAATCATTGTTACTGGTTTTCCAATGGCGAAGGACACT
GGGGTGGCAGAGCACGGCTCATATTCAGCCAAGGACTACACGGACCCACC
GCCGGAGCCGCTATTCGACGCCGTGGAGCTGACCAAATGGTCATTCTACA
GAGCCTTGATAGCTGAGTTCATAGCAACCCTGCTCTTTCTTTACGTCACT
GTCTTGACTGTCATTGGCTACAAAAGCCAGACCGATCCCGCCAAGAACGT
CGACGGCTGTGCCGGCGTCGGCATCCTCGGCATCGCCTGGGCCTTCGGTG
GCATGATCTTTGTCCTCGTTTACTGCACCGCCGGTATCTCAGGTGGTCAC
ATTAACCCGGCAGTGACGTTCGGACTATTCTTGGCCCGCAAGGTGTCGTT
GGTCCGTGCTGTGATGTACATGGTGGCGCAGTGCCTTGGTGCTATCTCCG
GTGTTGGGTTGGTCAAGGCTTTCCAAAAATCTTACTACACAAGGTACGGA
GGTGGGGCCAACGAGCTGGCCGATGGGTACAGCACCGGCGTTGGATTGGC
CGCCGAGATCATCGGCACCTTTGTCTTGGTTTACACTGTCTTCTCGGCCA
CTGATCCCAAGAGAAGCGCCAGAGACTCCCACGTTCCCGTTTTGGCACCG
CTCCCCATTGGATTTGCTGTGTTCATGGTACACTTGGCCACAATCCCAAT
CACTGGCACTGGCATTAACCCAGCAAGGAGTCTCGGGGCCGCTGTTATTT
ACAACAAGGACGAAGCTTGGGATGATCAATGGCTCTTCTGGGTTGGNNNN
N
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