CK933990

Overview
NameCK933990
Unique NameCK933990
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length901
Libraries
Library NameType
Developing fruit peel at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig7528 contig Csv1_Contig7528:19..919. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CK933990 vs. ExPASy Swiss-Prot
Match: AQPZ_BRUME (Aquaporin Z OS=Brucella melitensis GN=aqpZ PE=3 SV=1)

HSP 1 Score: 116.316 bits (290), Expect = 2.401e-25
Identity = 72/183 (39.34%), Postives = 98/183 (53.55%), Query Frame = 1
Query:  364 GVGILGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAISGVGL--VKAFQKSYYTRYG---GGANELA-DGYSTGVGLAAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSLGAAVIYNKDEAWDDQWLFWV 894
            G+G LG+A AFG  +  + Y   GISGGH NPAV+ GL +A ++     + Y VAQ LGAI+   +  V A  K  ++  G    G  EL+  GYS   GL  EII T   +  +  +T     A        AP+ IGF + ++HL +IP+T T +NPARS G A ++    A    WLFWV
Sbjct:   33 GIGFLGVALAFGLTVLTMAYAVGGISGGHFNPAVSLGLTVAGRLPAKDLIPYWVAQVLGAIAAAAILYVIASGKDGFSAGGLASNGYGELSPGGYSMMAGLLIEIILTAFFIIIILGSTSSLAPAG------FAPIAIGFGLTLIHLVSIPVTNTWVNPARSTGVA-LFADTAALSQLWLFWV 208          
BLAST of CK933990 vs. ExPASy Swiss-Prot
Match: TIP12_MAIZE (Aquaporin TIP1-2 OS=Zea mays GN=TIP1-2 PE=2 SV=1)

HSP 1 Score: 115.161 bits (287), Expect = 5.348e-25
Identity = 81/229 (35.37%), Postives = 116/229 (50.66%), Query Frame = 1
Query:  226 ELTKWSFYRALIAEFIAXXXXXXXXXXXXIGYKSQTDPAKNVDGCAGVGILGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAISGVGLVKAFQKSYYTRYGGGANELADGYSTGVG----LAAEIIGTFVLVYTVF-SATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSLGAAVIYNKDEAWDDQWLFWVG 897
            EL+     +A +AEFI+            + +   TD           G++  + A    +FV V   A ISGGH+NPAVTFG F+   +SL++A++Y VAQ LG++    L+K           GGA   A   S GVG    +  E++ TF LVYTV+ +A DPK+      + V+AP+ IGF V    LA     G  +NPA S G AV+      W++ W++WVG
Sbjct:   13 ELSHPDTAKAAVAEFISTLIFVFAGSGSGMAFSKLTDGG----AATPAGLIAASLAHALALFVAVSVGANISGGHVNPAVTFGAFVGGNISLLKALVYWVAQLLGSVVACLLLKIAT--------GGAALGAFSLSAGVGAMNAVVLEMVMTFGLVYTVYATAVDPKK----GDLGVIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPAVVTG---VWENHWVYWVG 222          
BLAST of CK933990 vs. ExPASy Swiss-Prot
Match: AQPZ2_RHIME (Aquaporin Z 2 OS=Rhizobium meliloti GN=aqpZ2 PE=3 SV=1)

HSP 1 Score: 115.161 bits (287), Expect = 5.348e-25
Identity = 65/184 (35.33%), Postives = 97/184 (52.72%), Query Frame = 1
Query:  364 GVGILGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAISGVGLVKA-------FQKSYYTRYGGGANELADGYSTGVGLAAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSLGAAVIYNKDEAWDDQWLFWV 894
            G+G+LG+++AFG  +  + Y   GISGGH NPAV+ GL +A +V     V Y++AQ  GAI    ++         FQ   +   G G +    GYS    L  E++ TF  +  +  +T  +  A        AP+ IG A+ ++HL +IP+T T +NPARS G A ++    A    WLFW+
Sbjct:   33 GIGLLGVSFAFGLTVLTMAYTVGGISGGHFNPAVSLGLAVAGRVPAASLVSYVIAQVAGAIIAAAVLYVIATGKADFQLGSFAANGYGEHS-PGGYSLTAALVTEVVMTFFFLIIILGSTHRRVPAG------FAPIAIGLALTLIHLVSIPVTNTSVNPARSTGQA-LFVGGWALSQLWLFWI 208          
BLAST of CK933990 vs. ExPASy Swiss-Prot
Match: AQP5_HUMAN (Aquaporin-5 OS=Homo sapiens GN=AQP5 PE=1 SV=1)

HSP 1 Score: 115.161 bits (287), Expect = 5.348e-25
Identity = 78/225 (34.67%), Postives = 113/225 (50.22%), Query Frame = 1
Query:  226 ELTKWSFYRALIAEFIAXXXXXXXXXXXXIGYKSQTDPAKNVDGCAGVGILGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAISGVGLVKAFQKSYYTRYGGGANELADGYSTGVGLAAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAP-LPIGFAVFMVHLATIPITGTGINPARSLGAAVIYNKDEAWDDQWLFWVG 897
            E+   +F +A+ AEF+A            + + S               IL IA AFG  I  L      +SGGHINPA+T  L +  ++SL+RA  Y+ AQ +GAI+G G++         R     N L +  + G  +  E+I TF L   +F++TD +R++     PV +P L IG +V + HL  I  TG  +NPARS G AV+ N+       W+FWVG
Sbjct:    4 EVCSVAFLKAVFAEFLATLIFVFFGLGSALKWPSALPT-----------ILQIALAFGLAIGTLAQALGPVSGGHINPAITLALLVGNQISLLRAFFYVAAQLVGAIAGAGILYGV-APLNARGNLAVNALNNNTTQGQAMVVELILTFQLALCIFASTDSRRTS-----PVGSPALSIGLSVTLGHLVGIYFTGCSMNPARSFGPAVVMNRFS--PAHWVFWVG 209          
BLAST of CK933990 vs. ExPASy Swiss-Prot
Match: AQPZ1_RHIME (Aquaporin Z 1 OS=Rhizobium meliloti GN=aqpZ1 PE=3 SV=1)

HSP 1 Score: 114.775 bits (286), Expect = 6.985e-25
Identity = 69/184 (37.50%), Postives = 101/184 (54.89%), Query Frame = 1
Query:  364 GVGILGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAISGVGL--VKAFQKSYYTRYGGGANELAD----GYSTGVGLAAEIIGTFVLVYTVFSATDPKRSARDSHVPV-LAPLPIGFAVFMVHLATIPITGTGINPARSLGAAVIYNKDEAWDDQWLFWV 894
            G+G+LG+++AFG  +  + Y   GISGGH NPAV+ GL +A ++     V Y++AQ  GAI+   +  V A  K+ +   G  AN   +    GYS    L  E++ T   +  +  +T        S VPV  AP+ IG  + ++HL +IP+T T +NPARS G A ++  D A    WLFWV
Sbjct:   33 GIGLLGVSFAFGLTVLTMAYAVGGISGGHFNPAVSVGLAVAGRMPPASLVGYILAQVTGAIAAAAVLYVIASGKADFQLGGFAANGYGEHSPGGYSLTAALVTEVVMTAFFLLIILGST-------HSRVPVGFAPIAIGLGLTLIHLVSIPVTNTSVNPARSTGQA-LFVGDWAISQLWLFWV 208          
BLAST of CK933990 vs. ExPASy Swiss-Prot
Match: AQP2_SHEEP (Aquaporin-2 OS=Ovis aries GN=AQP2 PE=2 SV=1)

HSP 1 Score: 114.775 bits (286), Expect = 6.985e-25
Identity = 78/224 (34.82%), Postives = 108/224 (48.21%), Query Frame = 1
Query:  226 ELTKWSFYRALIAEFIAXXXXXXXXXXXXIGYKSQTDPAKNVDGCAGVGILGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAISGVGLVKAFQKSYYTRYGGGANELADGYSTGVGLAAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSLGAAVIYNKDEAWDDQWLFWVG 897
            EL   +F RA++AEF+A            + +             A   +L IA AFG  I  LV     +SG HINPAVT    +   VS +RAV Y+ AQ LGA++G  L+         R     N L +  + G  +  E+  T  LV  +F +TD +R  +  H      L IGF+V + HL  I  TG  +NPARSL  A++  K   +DD W+FW+G
Sbjct:    3 ELRSIAFSRAVLAEFLATLLFVFFGLGSALNWPQ-----------ALPSVLQIAMAFGLAIGTLVQALGHVSGAHINPAVTVACLVGCHVSFLRAVFYVAAQLLGAVAGAALLHEITPP-AIRGDLAVNALNNNSTAGQAVTVELFLTLQLVLCIFPSTDKRRGKQLGH----PALSIGFSVALGHLLGIHYTGCSMNPARSLAPAIVTGK---FDDHWVFWIG 207          
BLAST of CK933990 vs. ExPASy Swiss-Prot
Match: TIP21_ARATH (Aquaporin TIP2-1 OS=Arabidopsis thaliana GN=TIP2-1 PE=1 SV=2)

HSP 1 Score: 114.39 bits (285), Expect = 9.122e-25
Identity = 83/220 (37.73%), Postives = 114/220 (51.82%), Query Frame = 1
Query:  250 RALIAEFIAXXXXXXXXXXXXIGYKSQTDPAKNVDGCAGVGILGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAISGVGLVKAFQKSYYTRYGGGA---NELADGYSTGVGLAAEIIGTFVLVYTVF-SATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSLGAAVIYNKDEAWDDQWLFWVG 897
            RA +AEFI+            I Y   T  A         G++ IA   G  +FV V   A ISGGH+NPAVTFGL +  +++++  V Y +AQ LG+ +   L+K     Y T  GG A   + +A G  +  G+  EII TF LVYTV+ +A DPK+ +    +  +APL IG  V    LA  P +G  +NPARS G AV       +   W++WVG
Sbjct:   19 RAYLAEFISTLLFVFAGVGSAIAYAKLTSDA----ALDTPGLVAIAVCHGFALFVAVAIGANISGGHVNPAVTFGLAVGGQITVITGVFYWIAQLLGSTAACFLLK-----YVT--GGLAVPTHSVAAGLGSIEGVVMEIIITFALVYTVYATAADPKKGS----LGTIAPLAIGLIVGANILAAGPFSGGSMNPARSFGPAVAAGD---FSGHWVYWVG 220          
BLAST of CK933990 vs. ExPASy Swiss-Prot
Match: TIP1_MEDSA (Probable aquaporin TIP-type OS=Medicago sativa GN=MCP1 PE=2 SV=2)

HSP 1 Score: 114.39 bits (285), Expect = 9.122e-25
Identity = 79/226 (34.96%), Postives = 116/226 (51.33%), Query Frame = 1
Query:  226 ELTKWSFYRALIAEFIAXXXXXXXXXXXXIGYKSQTDPAKNVDGCAG-VGILGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAISGVGLVKAFQKSYYTRYGGGANELADGYSTGVGLAAEIIGTFVLVYTVF-SATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSLGAAVIYNKDEAWDDQWLFWVG 897
            E T     +A +AEFI+            I Y   T+     DG A   G++  + A    +FV V   A ISGGH+NPAV FG F+   ++L+R ++Y++AQ LG+I    L+     S    +G     L++G   G  L  EI+ TF LVYTV+ +A DPK+     ++ ++AP+ IGF V    L     TG  +NPA S G AV+     +W + W++W G
Sbjct:   13 EATHPDTLKAGLAEFISTFIFVFAGSGSGIAYNKLTN-----DGAATPAGLISASIAHAFALFVAVSVGANISGGHVNPAV-FGAFVGGNITLLRGIVYIIAQLLGSIVCSALLVFVTASSVPAFG-----LSEGVGVGPALVLEIVMTFGLVYTVYATAVDPKK----GNIGIIAPIAIGFIVGANILVGGAFTGASMNPAVSFGPAVV---SWSWSNHWVYWAG 220          
BLAST of CK933990 vs. ExPASy Swiss-Prot
Match: AQP2_HUMAN (Aquaporin-2 OS=Homo sapiens GN=AQP2 PE=1 SV=1)

HSP 1 Score: 114.39 bits (285), Expect = 9.122e-25
Identity = 79/224 (35.27%), Postives = 109/224 (48.66%), Query Frame = 1
Query:  226 ELTKWSFYRALIAEFIAXXXXXXXXXXXXIGYKSQTDPAKNVDGCAGVGILGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAISGVGLVKAFQKSYYTRYGGGANELADGYSTGVGLAAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSLGAAVIYNKDEAWDDQWLFWVG 897
            EL   +F RA+ AEF+A            + +             A   +L IA AFG  I  LV     ISG HINPAVT    +   VS++RA  Y+ AQ LGA++G  L+     +   R     N L++  + G  +  E+  T  LV  +F++TD +R       P    L IGF+V + HL  I  TG  +NPARSL  AV+  K   +DD W+FW+G
Sbjct:    3 ELRSIAFSRAVFAEFLATLLFVFFGLGSALNWPQ-----------ALPSVLQIAMAFGLGIGTLVQALGHISGAHINPAVTVACLVGCHVSVLRAAFYVAAQLLGAVAGAALLHEITPA-DIRGDLAVNALSNSTTAGQAVTVELFLTLQLVLCIFASTDERRGEN----PGTPALSIGFSVALGHLLGIHYTGCSMNPARSLAPAVVTGK---FDDHWVFWIG 207          
BLAST of CK933990 vs. ExPASy Swiss-Prot
Match: AQPZ_BRUSU (Aquaporin Z OS=Brucella suis GN=aqpZ PE=3 SV=1)

HSP 1 Score: 114.005 bits (284), Expect = 1.191e-24
Identity = 71/183 (38.80%), Postives = 97/183 (53.01%), Query Frame = 1
Query:  364 GVGILGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAISGVGL--VKAFQKSYYTRYG---GGANELA-DGYSTGVGLAAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSLGAAVIYNKDEAWDDQWLFWV 894
            G+G LG+A AFG  +  + Y   GISGGH NPAV+  L +A ++     + Y VAQ LGAI+   +  V A  K  ++  G    G  EL+  GYS   GL  EII T   +  +  +T     A        AP+ IGF + ++HL +IP+T T +NPARS G A ++    A    WLFWV
Sbjct:   33 GIGFLGVALAFGLTVLTMAYAVGGISGGHFNPAVSLSLTVAGRLPAKDLIPYWVAQVLGAIATAAILYVIASGKDGFSAGGLASNGYGELSPGGYSMMAGLLIEIILTAFFIIIILGSTSSLAPAG------FAPIAIGFGLTLIHLVSIPVTNTSVNPARSTGVA-LFADTAALSQLWLFWV 208          
The following BLAST results are available for this feature:
BLAST of CK933990 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 182
Match NameE-valueIdentityDescription
AQPZ_BRUME2.401e-2539.34Aquaporin Z OS=Brucella melitensis GN=aqpZ PE=3 SV... [more]
TIP12_MAIZE5.348e-2535.37Aquaporin TIP1-2 OS=Zea mays GN=TIP1-2 PE=2 SV=1[more]
AQPZ2_RHIME5.348e-2535.33Aquaporin Z 2 OS=Rhizobium meliloti GN=aqpZ2 PE=3 ... [more]
AQP5_HUMAN5.348e-2534.67Aquaporin-5 OS=Homo sapiens GN=AQP5 PE=1 SV=1[more]
AQPZ1_RHIME6.985e-2537.50Aquaporin Z 1 OS=Rhizobium meliloti GN=aqpZ1 PE=3 ... [more]
AQP2_SHEEP6.985e-2534.82Aquaporin-2 OS=Ovis aries GN=AQP2 PE=2 SV=1[more]
TIP21_ARATH9.122e-2537.73Aquaporin TIP2-1 OS=Arabidopsis thaliana GN=TIP2-1... [more]
TIP1_MEDSA9.122e-2534.96Probable aquaporin TIP-type OS=Medicago sativa GN=... [more]
AQP2_HUMAN9.122e-2535.27Aquaporin-2 OS=Homo sapiens GN=AQP2 PE=1 SV=1[more]
AQPZ_BRUSU1.191e-2438.80Aquaporin Z OS=Brucella suis GN=aqpZ PE=3 SV=1[more]

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Properties
Property NameValue
Genbank descriptionCGF1004542_G01 Developing fruit peel at 38 DAFB Citrus sinensis cDNA clone P38DAB10001_IVF_G01 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK933990 ID=CK933990; Name=CK933990; organism=Citrus sinensis; type=EST; length=901bp
GGGGATACCNNNAACAAGCAAAAAAAAAGAAAAAGAAAAAGAAAAAGGAA
AAGGCTTCTCTCTCGTTGTGCTTGTGGCTTTGCAGTGCTCTCAGTTTTCT
CTGTTTCTCTCCAAATCATTGTTACTGGTTTTCCAATGGCGAAGGACACT
GGGGTGGCAGAGCACGGCTCATATTCAGCCAAGGACTACACGGACCCACC
GCCGGAGCCGCTATTCGACGCCGTGGAGCTGACCAAATGGTCATTCTACA
GAGCCTTGATAGCTGAGTTCATAGCAACCCTGCTCTTTCTTTACGTCACT
GTCTTGACTGTCATTGGCTACAAAAGCCAGACCGATCCCGCCAAGAACGT
CGACGGCTGTGCCGGCGTCGGCATCCTCGGCATCGCCTGGGCCTTCGGTG
GCATGATCTTTGTCCTCGTTTACTGCACCGCCGGTATCTCAGGTGGTCAC
ATTAACCCGGCAGTGACGTTCGGACTATTCTTGGCCCGCAAGGTGTCGTT
GGTCCGTGCTGTGATGTACATGGTGGCGCAGTGCCTTGGTGCTATCTCCG
GTGTTGGGTTGGTCAAGGCTTTCCAAAAATCTTACTACACAAGGTACGGA
GGTGGGGCCAACGAGCTGGCCGATGGGTACAGCACCGGCGTTGGATTGGC
CGCCGAGATCATCGGCACCTTTGTCTTGGTTTACACTGTCTTCTCGGCCA
CTGATCCCAAGAGAAGCGCCAGAGACTCCCACGTTCCCGTTTTGGCACCG
CTCCCCATTGGATTTGCTGTGTTCATGGTACACTTGGCCACAATCCCAAT
CACTGGCACTGGCATTAACCCAGCAAGGAGTCTCGGGGCCGCTGTTATTT
ACAACAAGGACGAAGCTTGGGATGATCAATGGCTCTTCTGGGTTGGNNNN
N
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