CK933992

Overview
NameCK933992
Unique NameCK933992
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length894
Libraries
Library NameType
Developing fruit peel at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK933992 vs. ExPASy Swiss-Prot
Match: HTPG_COXBN (Chaperone protein htpG OS=Coxiella burnetii (strain Dugway 5J108-111) GN=htpG PE=3 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 2.004e-16
Identity = 54/170 (31.76%), Postives = 94/170 (55.29%), Query Frame = 2
Query:    8 EVIFFTDPVDEYLMQYLMDYEDKKFQNVSKEGLKLGKDTKDKELK-----ESFKELTKWWKGALASENVDDVKVSNRLDNTPCVVVTSKYGWSANMERIMQSQTLSDASKQAYMRGKRVLEINPRHPIIKELRERVVKDPEDAGVQQTAQLIYQTALMESGFSLNDPKDF 502
            EV+  +D VDE+L+ +L ++E K  Q+++K  L LG   K+++++     + F EL K +K  L  E + DV++++RL ++P  VV  +   S +++R++        + Q +M+ K +LEINP HP+I     RV  + +     + A L+   AL+  G  L DP  F
Sbjct:  464 EVLLMSDRVDEWLVAHLNEFEGKSLQSIAKGTLDLGDLEKEEKVETEKFEKDFDELLKQFKEVLG-EKIKDVRITHRLTDSPTCVVFDENEMSGHLQRLLIQ------TGQDFMQAKPILEINPSHPLIL----RVKNESDKTRFNRWADLLLNQALLAEGEQLKDPASF 622          
BLAST of CK933992 vs. ExPASy Swiss-Prot
Match: HTPG_BACSU (Chaperone protein htpG OS=Bacillus subtilis GN=htpG PE=3 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 2.004e-16
Identity = 54/174 (31.03%), Postives = 99/174 (56.90%), Query Frame = 2
Query:    2 GYEVIFFTDPVDEYLMQYLMDYEDKKFQNVSKE--GLKLGKDTKDKELKES-FKELTKWWKGALASENVDDVKVSNRLDNTPCVVVTSKYGWSANMERIMQSQTLSDASKQAYMRGKRVLEINPRHPIIKELRERVVKDPEDAGVQQTAQLIYQTALMESGFSLNDPKDFASRI 514
            GYE+++FT+ +DE+ ++ L  Y++K+F++VS    G+   +D K  E +ES +K+L +  K  L S+ V +V++S RL + P V + +    +  ME+I+ +   S       ++ ++VLEINP H + + L++   +D E   +     L+Y  AL+  G  + DP +F + I
Sbjct:  457 GYEILYFTEDIDEFAIKMLASYQEKEFKSVSSGDLGIDTDEDQKQSEEEESKYKDLFEEMKNIL-SDKVKNVRISKRLKSHP-VCLAADGEVTIEMEKILNAMPDSQ-----NVKAEKVLEINPNHEVFQTLQDAFEQDKEKLSLY--TNLLYNQALLIEGLPIQDPVEFTNNI 621          
BLAST of CK933992 vs. ExPASy Swiss-Prot
Match: HTPG_PSEAE (Chaperone protein htpG OS=Pseudomonas aeruginosa GN=htpG PE=3 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 2.617e-16
Identity = 52/177 (29.38%), Postives = 97/177 (54.80%), Query Frame = 2
Query:    2 GYEVIFFTDPVDEYLMQYLMDYEDKKFQNVSKEGLKLGKDTKDKELKESFKELTKWWKGAL------ASENVDDVKVSNRLDNTPCVVVTSKYGWSANMERIMQSQTLSDASKQAYMRGKRVLEINPRHPIIKELRERVVKDPEDAGVQQTAQLIYQTALMESGFSLNDPKDFASRI 514
            G EV+  TD +DE+LM YL +++ K+F +V++  L LG     +E K++ +E+ K  +G +        E V +V+VS+RL ++P ++   +      M +I+      +AS Q     K + EINP+HP+I    E++  +P++    + + +++  A + +G SL DP  +  R+
Sbjct:  460 GIEVLLLTDRIDEWLMSYLPEFDGKQFVDVARGDLDLG-SLDSEEDKKAQEEVAKSKEGLIERLKKVLDEQVSEVRVSHRLTDSPAILAIGEQDLGLQMRQIL------EASGQKVPDSKPIFEINPQHPLI----EKLDAEPDEDRFGELSHILFDQAALAAGDSLKDPGAYVRRL 625          
BLAST of CK933992 vs. ExPASy Swiss-Prot
Match: HTPG_CHRVO (Chaperone protein htpG OS=Chromobacterium violaceum GN=htpG PE=3 SV=2)

HSP 1 Score: 85.8853 bits (211), Expect = 3.418e-16
Identity = 58/177 (32.77%), Postives = 95/177 (53.67%), Query Frame = 2
Query:    2 GYEVIFFTDPVDEYLMQYLMDYEDKKFQNVSKEGLKLG--KDTKDKE----LKESFKELTKWWKGALASENVDDVKVSNRLDNTPCVVVTSKYGWSANMERIMQSQTLSDASKQAYMRGKRVLEINPRHPIIKELRERVVKDPEDAGVQQTAQLIYQTALMESGFSLNDPKDFASRI 514
            G EV+  TD VDE++   L +++ K  Q+V+K  L LG  +D  DKE    ++E+ K + +  + AL  + V +V+ + RL  +P  +V  ++  SA++ER+++      A+ Q     K  LEINP H ++K L E    + ++A     A ++Y  AL+  G  L DP  F  RI
Sbjct:  457 GVEVLLLTDRVDEWVTGSLFEFDGKALQSVAKGALDLGALEDEADKEAQKQVEEASKPVVEKVQKALG-DKVKEVRATARLVESPACLVAGEHDMSAHLERMLK------AAGQKIEGSKPTLEINPEHVLVKRLAE----ESDEARAGDLAAVLYDQALLAEGGKLEDPASFVKRI 622          
BLAST of CK933992 vs. ExPASy Swiss-Prot
Match: HTPG_SHEFN (Chaperone protein htpG OS=Shewanella frigidimarina (strain NCIMB 400) GN=htpG PE=3 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 4.464e-16
Identity = 58/173 (33.53%), Postives = 94/173 (54.34%), Query Frame = 2
Query:    2 GYEVIFFTDPVDEYLMQYLMDYEDKKFQNVSKEGLKLG--KDTKDKE----LKESFKELTKWWKGALASENVDDVKVSNRLDNTPCVVVTSKYGWSANMERIMQSQTLSDASKQAYMRGKRVLEINPRHPIIKELRERVVKDPEDAGVQQTAQLIYQTALMESGFSLNDPKDF 502
            G EV+  ++ +DE+L+ +L +++DKK  +V++  L+LG  +D  DKE    + E  K L +  K ALA ++V +V+V++RL +TP  VV  +   S  M ++MQ      A+ Q     K   EINP HP+++ L      + ++      A L+ Q AL+    SL DP  F
Sbjct:  463 GIEVLLLSERIDEWLVNHLTEFKDKKLHSVTRGDLELGELEDAADKEAHDKVAEESKGLIERVKAALA-DSVSEVRVTSRLTDTPACVVAGEGEMSTQMIKLMQ------AAGQPVPESKPTFEINPTHPLVEHLN----NETDEQLFADWANLLLQQALLSEKGSLADPSAF 624          
BLAST of CK933992 vs. ExPASy Swiss-Prot
Match: HTPG_PSEHT (Chaperone protein htpG OS=Pseudoalteromonas haloplanktis (strain TAC 125) GN=htpG PE=3 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 4.464e-16
Identity = 60/177 (33.90%), Postives = 97/177 (54.80%), Query Frame = 2
Query:    2 GYEVIFFTDPVDEYLMQYLMDYEDKKFQNVSKEGLKLGK---DTKDKELKESFKE---LTKWWKGALASENVDDVKVSNRLDNTPCVVVTSKYGWSANMERIMQSQTLSDASKQAYMRGKRVLEINPRHPIIKELRERVVKDPEDAGVQQTAQLIYQTALMESGFSLNDPKDFASRI 514
            G EV+  +D VDE++M +L ++ DK+ Q++++  L LGK   +   K  +ES KE   L +  K AL  E V +V+ ++RL ++P  VV+     S+ M+++M+S        QA    K V E+NP H ++K L +   +  ED   Q +  L+ Q  L E G +L DP  F +R+
Sbjct:  463 GIEVLLLSDRVDEWMMSHLTEFADKQLQSITRGDLDLGKLDDEETKKAQEESEKEVAGLVERIKTALGDE-VKEVRFTHRLTDSPACVVSDDNDMSSQMQKLMES------VGQAAPEAKPVFELNPEHQLVKHLND---EQDEDKFAQWSHVLLDQALLAERG-TLKDPTGFVTRL 628          
BLAST of CK933992 vs. ExPASy Swiss-Prot
Match: HTPG_MARMS (Chaperone protein htpG OS=Marinomonas sp. (strain MWYL1) GN=htpG PE=3 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 4.464e-16
Identity = 51/176 (28.98%), Postives = 88/176 (50.00%), Query Frame = 2
Query:    2 GYEVIFFTDPVDEYLMQYLMDYEDKKFQNVSKEGLKLGKDTKDKELKESFKELTKW-----WKGALASENVDDVKVSNRLDNTPCVVVTSKYGWSANMERIMQSQTLSDASKQAYMRGKRVLEINPRHPIIKELRERVVKDPEDAGVQQTAQLIYQTALMESGFSLNDPKDFASRI 514
            G+EV+  +D +DE++M  L ++E K FQ+V+K  L L     ++E KE  ++  K         A+ +E V  V  ++RL N+P  +V  +Y     M R+++       + Q     K  LE+NP HPI+ ++      + ++      A L+++ A +  G  L DP  F SR+
Sbjct:  468 GFEVLLLSDRIDEWMMSSLQEFEGKSFQDVTKGKLDLADQENEEEKKEKEEKAEKMKPLLDRMKAVLNEKVAGVNSTDRLTNSPACLVVGEYDMGLQMRRLLEQ------AGQKLPESKPTLEVNPDHPIVAKMD----SETDEERFADMAWLLFEQATLSEGGQLEDPATFVSRM 633          
BLAST of CK933992 vs. ExPASy Swiss-Prot
Match: HTPG_CLOAB (Chaperone protein htpG OS=Clostridium acetobutylicum GN=htpG PE=3 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 4.464e-16
Identity = 55/177 (31.07%), Postives = 103/177 (58.19%), Query Frame = 2
Query:    2 GYEVIFFTDPVDEYLMQYLMDYEDKKFQNVSKEGLKLGKDTKD-KELKESFKELTKWWKGALASENVDDVKVSNRLDNTPCVVVTSKYGWSANMERIMQSQTLSDASKQAYMRGKRVLEINPRHPIIKELRERVVKDPEDAGVQQTAQLIYQTALMESGFSLNDPKDFASRIYSTVK 529
            GYE+++FTD VDE+ ++ LM Y++K+F++VS + L    D K+ K+  E  K+L  + K  L  + V +V+ S+RL + P V +++    S  ME++++    ++      ++ +++LEIN  H +   ++    KD +D  +++ A L+Y  AL+  G  + DP  FA+ + S +K
Sbjct:  457 GYEILYFTDDVDEFAIKMLMKYKEKEFKSVSNKDLGFEADEKESKKETEENKDLFDFMKEVLDGK-VKEVRASSRLKSHP-VCLSNDGELSIEMEKVLKMMPDNN-----NVKAEKILEINTNHEMFNSIK-AAFKDDKDK-LKKYASLLYNEALLIEGLPIEDPVQFANDVASLMK 624          
BLAST of CK933992 vs. ExPASy Swiss-Prot
Match: HTPG_MAGSA (Chaperone protein htpG OS=Magnetospirillum magneticum (strain AMB-1 / ATCC 700264) GN=htpG PE=3 SV=2)

HSP 1 Score: 85.1149 bits (209), Expect = 5.830e-16
Identity = 61/187 (32.62%), Postives = 95/187 (50.80%), Query Frame = 2
Query:    2 GYEVIFFTDPVDEYLMQYLMDYEDKKFQNVSKEGLKLGK-----DTKDKELKES-FKELTKWWKGALAS--ENVDDVKVSNRLDNTPCVVVTSKYGWSANMERIMQSQTLSDASKQAYMRGKRVLEINPRHPIIKELRERVVKDPEDAGVQQTAQLIYQTALMESGFSLNDPKDFASRIYSTVKSSL 538
            G EV+  TDP+DE+ +  +  Y +K F++V+  G  L K       +DK+  E+   ELT   +    +  E V DV+ S RL  +   +V ++   S ++E++++      A  QA     R+LEINPRH +IK L  RV     DAG++  A L+   A +  G    DP  FA R+ S ++  L
Sbjct:  441 GVEVLLLTDPIDEFWVSAVRSYAEKDFRSVAAAGADLSKVKAPEGAEDKKADEAPADELTTLIEAVKLALGERVKDVRPSERLTESAVCLVAAEGEMSMHLEKMLR------AHNQAPGERARILEINPRHALIKGLAARVKAGGTDAGLEDAAFLLLDQARIIEGEPPADPAAFARRMVSVMEKGL 621          
BLAST of CK933992 vs. ExPASy Swiss-Prot
Match: HTPG_XANOR (Chaperone protein htpG OS=Xanthomonas oryzae pv. oryzae GN=htpG PE=3 SV=2)

HSP 1 Score: 84.7297 bits (208), Expect = 7.614e-16
Identity = 55/177 (31.07%), Postives = 94/177 (53.11%), Query Frame = 2
Query:    2 GYEVIFFTDPVDEYLMQYLMDYEDKKFQNVSKEGLKLGKDTKDKELKESFKELTKWWKG------ALASENVDDVKVSNRLDNTPCVVVTSKYGWSANMERIMQSQTLSDASKQAYMRGKRVLEINPRHPIIKELRERVVKDPEDAGVQQTAQLIYQTALMESGFSLNDPKDFASRI 514
            G EV+  TD +DE+LM YL +++ K F +V++  L LGK    +E K++ +E+ K  +G      A   E+V +V+VS+RL ++P ++   +      M +++      +AS QA    K V E NP HP+I++L      D         +Q+++  A + +G SL DP  +  R+
Sbjct:  460 GIEVLLLTDRIDEWLMSYLTEFDGKSFVDVARGDLDLGK-LDSEEDKKAQEEVAKSKEGLASRIKAALGEDVAEVRVSHRLTDSPAILAIGQGDLGLQMRQLL------EASGQAVPESKPVFEFNPTHPLIEKLDAEQDMD----RFCDLSQVLFDQAALAAGDSLKDPAGYVKRL 625          
The following BLAST results are available for this feature:
BLAST of CK933992 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 315
Match NameE-valueIdentityDescription
HTPG_COXBN2.004e-1631.76Chaperone protein htpG OS=Coxiella burnetii (strai... [more]
HTPG_BACSU2.004e-1631.03Chaperone protein htpG OS=Bacillus subtilis GN=htp... [more]
HTPG_PSEAE2.617e-1629.38Chaperone protein htpG OS=Pseudomonas aeruginosa G... [more]
HTPG_CHRVO3.418e-1632.77Chaperone protein htpG OS=Chromobacterium violaceu... [more]
HTPG_SHEFN4.464e-1633.53Chaperone protein htpG OS=Shewanella frigidimarina... [more]
HTPG_PSEHT4.464e-1633.90Chaperone protein htpG OS=Pseudoalteromonas halopl... [more]
HTPG_MARMS4.464e-1628.98Chaperone protein htpG OS=Marinomonas sp. (strain ... [more]
HTPG_CLOAB4.464e-1631.07Chaperone protein htpG OS=Clostridium acetobutylic... [more]
HTPG_MAGSA5.830e-1632.62Chaperone protein htpG OS=Magnetospirillum magneti... [more]
HTPG_XANOR7.614e-1631.07Chaperone protein htpG OS=Xanthomonas oryzae pv. o... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004542_G03 Developing fruit peel at 38 DAFB Citrus sinensis cDNA clone P38DAB10001_IVF_G03 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK933992 ID=CK933992; Name=CK933992; organism=Citrus sinensis; type=EST; length=894bp
GGGCTATGAGGTGATTTTCTTCACTGATCCAGTTGATGAATACCTGATGC
AATACCTGATGGATTATGAAGACAAAAAGTTCCAAAATGTATCTAAAGAG
GGTCTTAAACTTGGTAAAGACACTAAAGATAAGGAACTTAAGGAGTCATT
CAAGGAGCTCACGAAATGGTGGAAGGGTGCTCTTGCCAGCGAGAACGTGG
ATGATGTGAAAGTAAGCAACCGCTTGGATAACACCCCTTGCGTAGTTGTG
ACATCAAAGTATGGTTGGAGTGCGAATATGGAGAGGATCATGCAGTCTCA
GACTCTCTCAGATGCTAGCAAGCAAGCATATATGCGGGGCAAGAGGGTGC
TTGAAATCAATCCAAGGCATCCAATCATCAAAGAGCTCCGGGAGAGAGTC
GTCAAGGACCCTGAGGATGCGGGTGTCCAGCAAACAGCCCAACTCATTTA
CCAGACGGCACTCATGGAGAGTGGCTTTTCGCTCAATGATCCCAAGGATT
TTGCCTCCCGAATTTACAGCACGGTGAAATCTAGCCTTAACATTAGCCCT
GATGCAGCTGTTGAGGAGGAAGATGATGTAGAAGAGACTGATGCTGACAC
TGAAATGAAAGAATCTTCGGCTGCCAAAGAGGACGTGGATACAGAGTATT
CTGGCAAGGATGAGTTGTAGATTGCCTAATAAAAGCATGGGCAACAACAT
CCCAGTTTCTTAGGAAAGCATAAACGCTCTGCATAGTGCGTTCATTTCCA
GTTTTGAAAACTTTGGTGAAAAAACGTTTTAGATCTTAGATTCAATGTAA
CCATAATCACCGGGAATTTTGTCTTTTAACAGTTGACACTATCAATTATG
GATGAATCAGCGTGTCAAAAAAAAAAAAAAAAAAAAAAAAAAAA
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