CK933992

Overview
NameCK933992
Unique NameCK933992
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length894
Libraries
Library NameType
Developing fruit peel at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK933992 vs. ExPASy Swiss-Prot
Match: HTPG_XANOM (Chaperone protein htpG OS=Xanthomonas oryzae pv. oryzae (strain MAFF 311018) GN=htpG PE=3 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 7.614e-16
Identity = 55/177 (31.07%), Postives = 94/177 (53.11%), Query Frame = 2
Query:    2 GYEVIFFTDPVDEYLMQYLMDYEDKKFQNVSKEGLKLGKDTKDKELKESFKELTKWWKG------ALASENVDDVKVSNRLDNTPCVVVTSKYGWSANMERIMQSQTLSDASKQAYMRGKRVLEINPRHPIIKELRERVVKDPEDAGVQQTAQLIYQTALMESGFSLNDPKDFASRI 514
            G EV+  TD +DE+LM YL +++ K F +V++  L LGK    +E K++ +E+ K  +G      A   E+V +V+VS+RL ++P ++   +      M +++      +AS QA    K V E NP HP+I++L      D         +Q+++  A + +G SL DP  +  R+
Sbjct:  460 GIEVLLLTDRIDEWLMSYLTEFDGKSFVDVARGDLDLGK-LDSEEDKKAQEEVAKSKEGLASRIKAALGEDVAEVRVSHRLTDSPAILAIGQGDLGLQMRQLL------EASGQAVPESKPVFEFNPTHPLIEKLDAEQDMD----RFCDLSQVLFDQAALAAGDSLKDPAGYVKRL 625          
BLAST of CK933992 vs. ExPASy Swiss-Prot
Match: HTPG_SHEDO (Chaperone protein htpG OS=Shewanella denitrificans (strain OS217 / ATCC BAA-1090 / DSM 15013) GN=htpG PE=3 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 7.614e-16
Identity = 59/173 (34.10%), Postives = 90/173 (52.02%), Query Frame = 2
Query:    2 GYEVIFFTDPVDEYLMQYLMDYEDKKFQNVSKEGLKLGK--DTKDKELKESFKE----LTKWWKGALASENVDDVKVSNRLDNTPCVVVTSKYGWSANMERIMQSQTLSDASKQAYMRGKRVLEINPRHPIIKELRERVVKDPEDAGVQQTAQLIYQTALMESGFSLNDPKDF 502
            G EV+  ++ +DE+L+ +L +++ KK  +V++  L+LG+  D  DKE K+   E    L +  K AL ++ V +VKV+ RL +TP  VV  +   S  M ++MQ      A+ QA    K   EINP HP++  L +      E       + L+ Q  L E G SL DP  F
Sbjct:  463 GIEVLLMSERIDEWLINHLTEFKGKKLHSVTRGDLELGELEDAADKEAKDKITEEAKGLVERMKAALGAK-VSEVKVTTRLTDTPACVVAGEGEMSTQMIKLMQ------AAGQAVPESKPTFEINPNHPLVARLNDEA---DEQLFADWASLLLQQAQLSEKG-SLADPSAF 624          
BLAST of CK933992 vs. ExPASy Swiss-Prot
Match: HTPG_PSYIN (Chaperone protein htpG OS=Psychromonas ingrahamii (strain 37) GN=htpG PE=3 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 7.614e-16
Identity = 56/176 (31.82%), Postives = 91/176 (51.70%), Query Frame = 2
Query:    2 GYEVIFFTDPVDEYLMQYLMDYEDKKFQNVSKEGLKLGKDTKDKELKESFKELTKWWK-----GALASENVDDVKVSNRLDNTPCVVVTSKYGWSANMERIMQSQTLSDASKQAYMRGKRVLEINPRHPIIKELRERVVKDPEDAGVQQTAQLIYQTALMESGFSLNDPKDFASRI 514
            G EV+  +D +DE+L+ +L +Y+ K F +V++  L LGK   +++ KE  K+ T++        A+  + V DV++++RL +TP  +V      S  M ++M          Q     K V E+NP H +I +L +      ED   Q +  L+ Q  L E G SL+DP +F  RI
Sbjct:  463 GIEVLLLSDRIDEWLLSHLPEYDGKTFTSVTQGDLDLGKLDSEEKKKEQEKQETEFASFVERVKAVLGDKVKDVRLTHRLTSTPSCIVADNDDMSTQMAKLMAQM------GQPVPESKPVFELNPEHVMIVKLADMA---DEDLFAQWSELLLEQAILSEKG-SLDDPSEFVGRI 628          
BLAST of CK933992 vs. ExPASy Swiss-Prot
Match: HTPG_PSEPK (Chaperone protein htpG OS=Pseudomonas putida (strain KT2440) GN=htpG PE=3 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 9.945e-16
Identity = 53/177 (29.94%), Postives = 95/177 (53.67%), Query Frame = 2
Query:    2 GYEVIFFTDPVDEYLMQYLMDYEDKKFQNVSKEGLKLGK--DTKDKELKESFKE----LTKWWKGALASENVDDVKVSNRLDNTPCVVVTSKYGWSANMERIMQSQTLSDASKQAYMRGKRVLEINPRHPIIKELRERVVKDPEDAGVQQTAQLIYQTALMESGFSLNDPKDFASRI 514
            G EV+  TD +DE+LM YL +++ K F ++++  L LGK    +DK+ +E   +    L +  KGAL  ++V +V+VS+RL ++P ++   +      M +I+      +AS Q     K + E NP HP+I++L     +D       + + +++  A + +G SL DP  +  R+
Sbjct:  460 GIEVLLLTDRIDEWLMSYLNEFDGKAFVDIARGDLDLGKLDSEEDKKAQEEVAKDKEGLVERLKGAL-GDSVAEVRVSHRLTDSPAILAIGEQDLGLQMRQIL------EASGQKVPESKPIFEFNPSHPLIEKLDHEQSED----RFAELSHILFDQAALAAGDSLKDPAAYVRRL 625          
BLAST of CK933992 vs. ExPASy Swiss-Prot
Match: HTPG_BORPA (Chaperone protein htpG OS=Bordetella parapertussis GN=htpG PE=3 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 9.945e-16
Identity = 60/177 (33.90%), Postives = 95/177 (53.67%), Query Frame = 2
Query:    2 GYEVIFFTDPVDEYLMQYLMDYEDKKFQNVSKEGLKLGK--DTKDK----ELKESFKELTKWWKGALASENVDDVKVSNRLDNTPCVVVTSKYGWSANMERIMQSQTLSDASKQAYMRGKRVLEINPRHPIIKELRERVVKDPEDAGVQQTAQLIYQTALMESGFSLNDPKDFASRI 514
            G EV+  +D VDE+++ YL +++ K   +V+K GL L +  D ++K    E+ E+FK L +  + ALA E V +V+V+ RL ++P  VV  +   S ++ R+++      A+ Q     K VLEINP H +I  +R     D  DA     A L+   AL+  G  + DP  F  R+
Sbjct:  464 GIEVLLLSDRVDEWMLSYLREFDGKSLVSVAKGGLDLAELADEEEKKRQSEVAETFKPLVERLQQALA-EQVKEVRVTQRLVDSPACVVVGQNELSPHLLRMLK------AAGQEAPEVKPVLEINPDHALIARIR-----DASDAEFGDWAALLLDQALLAEGAQIADPAAFVKRL 628          
BLAST of CK933992 vs. ExPASy Swiss-Prot
Match: HTPG_BORBR (Chaperone protein htpG OS=Bordetella bronchiseptica GN=htpG PE=3 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 9.945e-16
Identity = 60/177 (33.90%), Postives = 95/177 (53.67%), Query Frame = 2
Query:    2 GYEVIFFTDPVDEYLMQYLMDYEDKKFQNVSKEGLKLGK--DTKDK----ELKESFKELTKWWKGALASENVDDVKVSNRLDNTPCVVVTSKYGWSANMERIMQSQTLSDASKQAYMRGKRVLEINPRHPIIKELRERVVKDPEDAGVQQTAQLIYQTALMESGFSLNDPKDFASRI 514
            G EV+  +D VDE+++ YL +++ K   +V+K GL L +  D ++K    E+ E+FK L +  + ALA E V +V+V+ RL ++P  VV  +   S ++ R+++      A+ Q     K VLEINP H +I  +R     D  DA     A L+   AL+  G  + DP  F  R+
Sbjct:  464 GIEVLLLSDRVDEWMLSYLREFDGKSLVSVAKGGLDLAELADEEEKKRQSEVAETFKPLVERLQQALA-EQVKEVRVTQRLVDSPACVVVGQNELSPHLLRMLK------AAGQEAPEVKPVLEINPDHALIARIR-----DASDAEFGDWAALLLDQALLAEGAQIADPAAFVKRL 628          
BLAST of CK933992 vs. ExPASy Swiss-Prot
Match: HTPG_SHEAM (Chaperone protein htpG OS=Shewanella amazonensis (strain ATCC BAA-1098 / SB2B) GN=htpG PE=3 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 1.299e-15
Identity = 55/185 (29.73%), Postives = 97/185 (52.43%), Query Frame = 2
Query:    2 GYEVIFFTDPVDEYLMQYLMDYEDKKFQNVSKEGLKLG--KDTKDKELKESFKE----LTKWWKGALASENVDDVKVSNRLDNTPCVVVTSKYGWSANMERIMQSQTLSDASKQAYMRGKRVLEINPRHPIIKELRERVVKDPEDAGVQQTAQLIYQTALMESGFSLNDPKDFASRIYSTVKSSL 538
            G EV+  ++ +DE+L+ +L DY++K   +V++  L LG  +D  +K  +E   +    L + +K AL  + V DVK++ RL +TP  VVT +   S+ M ++MQ      A+ Q     K  LE+NP HP++     R+ K+ ++    + A+++   A +    SL DP  F   +   +  S+
Sbjct:  463 GIEVLLLSERIDEWLINHLHDYKEKALHSVTRGDLDLGALEDEAEKAAQEKLAQESEPLVERFKSAL-GDKVSDVKITTRLTDTPACVVTGEGEMSSQMIKLMQ------AAGQPVPESKPTLELNPTHPLV----ARLDKEQDETAFAEWAEMLLAQATLSERGSLADPSAFIKLVNQMLLKSV 636          
BLAST of CK933992 vs. ExPASy Swiss-Prot
Match: HTPG_RALSO (Chaperone protein htpG OS=Ralstonia solanacearum GN=htpG PE=3 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 1.299e-15
Identity = 56/180 (31.11%), Postives = 93/180 (51.67%), Query Frame = 2
Query:    2 GYEVIFFTDPVDEYLMQYLMDYEDKKFQNVSKEGLKLGKDTKDKELKE------SFKELTKWWKGALASENVDDVKVSNRLDNTPCVVVTSKYGWSANMERIMQSQTLSDASKQAYMRGKRVLEINPRHPIIKELR--ERVVKDPED-AGVQQTAQLIYQTALMESGFSLNDPKDFASRI 514
            G EV+  TD VDE+++ +L D+E+K   +V++ GL LG    + E  E       FK L    K  LA +   DV++++RL ++P  +V  +   S  + R+++       + Q     K VLE+NP HP++++L   E V     D A  +    +++  AL+  G SL DP D+  R+
Sbjct:  463 GVEVLLLTDRVDEWMLSFLHDFEEKALVSVARGGLDLGALEDEAERAEHAKVEGEFKPLVDRAKAVLA-DKAKDVRITHRLTDSPSCLVADEGDISGTLARLLKQ------AGQKAPDTKPVLELNPAHPLVRKLALLESVTGGEADRAAFEDRLHVLFDQALLAEGGSLADPADYVQRV 635          
BLAST of CK933992 vs. ExPASy Swiss-Prot
Match: HTPG_BORPE (Chaperone protein htpG OS=Bordetella pertussis GN=htpG PE=3 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 1.299e-15
Identity = 59/177 (33.33%), Postives = 95/177 (53.67%), Query Frame = 2
Query:    2 GYEVIFFTDPVDEYLMQYLMDYEDKKFQNVSKEGLKLGK--DTKDK----ELKESFKELTKWWKGALASENVDDVKVSNRLDNTPCVVVTSKYGWSANMERIMQSQTLSDASKQAYMRGKRVLEINPRHPIIKELRERVVKDPEDAGVQQTAQLIYQTALMESGFSLNDPKDFASRI 514
            G EV+  +D VDE+++ YL +++ K   +V+K GL L +  D ++K    E+ E+FK L +  + ALA E V +V+V+ RL ++P  VV  +   S ++ R+++      A+ Q     K VLEINP H ++  +R     D  DA     A L+   AL+  G  + DP  F  R+
Sbjct:  464 GIEVLLLSDRVDEWMLSYLREFDGKSLVSVAKGGLDLAELADEEEKKRQSEVAETFKPLVERLQQALA-EQVKEVRVTQRLVDSPACVVVGQNELSPHLLRMLK------AAGQEAPEVKPVLEINPDHALVARIR-----DASDAEFGDWAALLLDQALLAEGAQIADPAAFVKRL 628          
BLAST of CK933992 vs. ExPASy Swiss-Prot
Match: HTPG_BORA1 (Chaperone protein htpG OS=Bordetella avium (strain 197N) GN=htpG PE=3 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 1.299e-15
Identity = 60/177 (33.90%), Postives = 91/177 (51.41%), Query Frame = 2
Query:    2 GYEVIFFTDPVDEYLMQYLMDYEDKKFQNVSKEGLKLG------KDTKDKELKESFKELTKWWKGALASENVDDVKVSNRLDNTPCVVVTSKYGWSANMERIMQSQTLSDASKQAYMRGKRVLEINPRHPIIKELRERVVKDPEDAGVQQTAQLIYQTALMESGFSLNDPKDFASRI 514
            G EV+   D VDE+++ +L ++E K   +V+K GL L       +  K  E+ ESFK L +  + AL  E V +V+V+ RL ++P  VV  +   S ++ R+++      A+ Q     K VLEINP H +I  +R     D  DA     AQL+   AL+  G  + DP  F  R+
Sbjct:  459 GIEVLLLWDRVDEWMLSHLREFEGKSLVSVAKGGLDLADLADEEEKKKQTEVAESFKPLIERLQTALG-EQVKEVRVTLRLVDSPACVVVGQNDLSPHLLRMLK------AAGQEVPEVKPVLEINPEHALIARIR-----DVSDADFGAWAQLLLDQALLAEGAQIADPAAFVKRL 623          
The following BLAST results are available for this feature:
BLAST of CK933992 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 315
Match NameE-valueIdentityDescription
HTPG_XANOM7.614e-1631.07Chaperone protein htpG OS=Xanthomonas oryzae pv. o... [more]
HTPG_SHEDO7.614e-1634.10Chaperone protein htpG OS=Shewanella denitrificans... [more]
HTPG_PSYIN7.614e-1631.82Chaperone protein htpG OS=Psychromonas ingrahamii ... [more]
HTPG_PSEPK9.945e-1629.94Chaperone protein htpG OS=Pseudomonas putida (stra... [more]
HTPG_BORPA9.945e-1633.90Chaperone protein htpG OS=Bordetella parapertussis... [more]
HTPG_BORBR9.945e-1633.90Chaperone protein htpG OS=Bordetella bronchiseptic... [more]
HTPG_SHEAM1.299e-1529.73Chaperone protein htpG OS=Shewanella amazonensis (... [more]
HTPG_RALSO1.299e-1531.11Chaperone protein htpG OS=Ralstonia solanacearum G... [more]
HTPG_BORPE1.299e-1533.33Chaperone protein htpG OS=Bordetella pertussis GN=... [more]
HTPG_BORA11.299e-1533.90Chaperone protein htpG OS=Bordetella avium (strain... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004542_G03 Developing fruit peel at 38 DAFB Citrus sinensis cDNA clone P38DAB10001_IVF_G03 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK933992 ID=CK933992; Name=CK933992; organism=Citrus sinensis; type=EST; length=894bp
GGGCTATGAGGTGATTTTCTTCACTGATCCAGTTGATGAATACCTGATGC
AATACCTGATGGATTATGAAGACAAAAAGTTCCAAAATGTATCTAAAGAG
GGTCTTAAACTTGGTAAAGACACTAAAGATAAGGAACTTAAGGAGTCATT
CAAGGAGCTCACGAAATGGTGGAAGGGTGCTCTTGCCAGCGAGAACGTGG
ATGATGTGAAAGTAAGCAACCGCTTGGATAACACCCCTTGCGTAGTTGTG
ACATCAAAGTATGGTTGGAGTGCGAATATGGAGAGGATCATGCAGTCTCA
GACTCTCTCAGATGCTAGCAAGCAAGCATATATGCGGGGCAAGAGGGTGC
TTGAAATCAATCCAAGGCATCCAATCATCAAAGAGCTCCGGGAGAGAGTC
GTCAAGGACCCTGAGGATGCGGGTGTCCAGCAAACAGCCCAACTCATTTA
CCAGACGGCACTCATGGAGAGTGGCTTTTCGCTCAATGATCCCAAGGATT
TTGCCTCCCGAATTTACAGCACGGTGAAATCTAGCCTTAACATTAGCCCT
GATGCAGCTGTTGAGGAGGAAGATGATGTAGAAGAGACTGATGCTGACAC
TGAAATGAAAGAATCTTCGGCTGCCAAAGAGGACGTGGATACAGAGTATT
CTGGCAAGGATGAGTTGTAGATTGCCTAATAAAAGCATGGGCAACAACAT
CCCAGTTTCTTAGGAAAGCATAAACGCTCTGCATAGTGCGTTCATTTCCA
GTTTTGAAAACTTTGGTGAAAAAACGTTTTAGATCTTAGATTCAATGTAA
CCATAATCACCGGGAATTTTGTCTTTTAACAGTTGACACTATCAATTATG
GATGAATCAGCGTGTCAAAAAAAAAAAAAAAAAAAAAAAAAAAA
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