CK933992

Overview
NameCK933992
Unique NameCK933992
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length894
Libraries
Library NameType
Developing fruit peel at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK933992 vs. ExPASy Swiss-Prot
Match: HTPG_WOLPM (Chaperone protein htpG OS=Wolbachia pipientis wMel GN=htpG PE=3 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 1.696e-15
Identity = 48/179 (26.82%), Postives = 91/179 (50.84%), Query Frame = 2
Query:    2 GYEVIFFTDPVDEYLMQYLMDYEDKKFQNVSKEGLKLGK--------DTKDKELKESFKELTKWWKGALASENVDDVKVSNRLDNTPCVVVTSKYGWSANMERIMQSQTLSDASKQAYMRGKRVLEINPRHPIIKELRERVVKDPEDAGVQQTAQLIYQTALMESGFSLNDPKDFASRI 514
            G EV+ F DPVD++    + +Y+D+K ++V++  + L K        D ++K  +E  +E    +   +  ++V  VK+S +L ++P  +   +      MER ++ Q      KQ   R  +VLEIN +HP+IK + +   +  E+  ++    L++  A +  G  ++D   FA R+
Sbjct:  454 GLEVLLFVDPVDDFWTSVIHEYKDQKIKSVTRADVDLEKFSSEEDKTDEENKSNEEKTEETILQYFTTVLGDSVKSVKISKKLTDSPVCLAVDEGAMDLRMERFLREQ------KQLNYRTPKVLEINTKHPLIKSIMKSYAESGENPTLEDMIHLLFYQACIVEGEEMDDVSLFAKRL 626          
BLAST of CK933992 vs. ExPASy Swiss-Prot
Match: HTPG_SHISS (Chaperone protein htpG OS=Shigella sonnei (strain Ss046) GN=htpG PE=3 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 1.696e-15
Identity = 56/175 (32.00%), Postives = 90/175 (51.43%), Query Frame = 2
Query:    2 GYEVIFFTDPVDEYLMQYLMDYEDKKFQNVSK--EGLKLGKDTKDKELKESFKELTKWWK--GALASENVDDVKVSNRLDNTPCVVVTSKYGWSANMERIMQSQTLSDASKQAYMRGKRVLEINPRHPIIKELRERVVKDPEDAGVQQTAQLIYQTALMESGFSLNDPKDFASRI 514
            G EV+  +D +DE++M YL +++ K FQ+VSK  E L+   D  D+  KE+ K LT +     AL  E V DV++++RL +TP +V T     S  M ++        A+ Q     K + E+NP H ++K    R     ++A   +  +L+   AL+    +L DP  F  R+
Sbjct:  454 GIEVLLLSDRIDEWMMNYLTEFDGKPFQSVSKVDESLEKLADEVDESAKEAEKALTPFIDRVKALLGERVKDVRLTHRLTDTPAIVSTDADEMSTQMAKLFA------AAGQKVPEVKYIFELNPDHVLVK----RAADTEDEAKFSEWVELLLDQALLAERGTLEDPNLFIRRM 618          
BLAST of CK933992 vs. ExPASy Swiss-Prot
Match: HTPG_SHIFL (Chaperone protein htpG OS=Shigella flexneri GN=htpG PE=3 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 1.696e-15
Identity = 56/175 (32.00%), Postives = 90/175 (51.43%), Query Frame = 2
Query:    2 GYEVIFFTDPVDEYLMQYLMDYEDKKFQNVSK--EGLKLGKDTKDKELKESFKELTKWWK--GALASENVDDVKVSNRLDNTPCVVVTSKYGWSANMERIMQSQTLSDASKQAYMRGKRVLEINPRHPIIKELRERVVKDPEDAGVQQTAQLIYQTALMESGFSLNDPKDFASRI 514
            G EV+  +D +DE++M YL +++ K FQ+VSK  E L+   D  D+  KE+ K LT +     AL  E V DV++++RL +TP +V T     S  M ++        A+ Q     K + E+NP H ++K    R     ++A   +  +L+   AL+    +L DP  F  R+
Sbjct:  454 GIEVLLLSDRIDEWMMNYLTEFDGKPFQSVSKVDESLEKLADEVDESAKEAEKALTPFIDRVKALLGERVKDVRLTHRLTDTPAIVSTDADEMSTQMAKLFA------AAGQKVPEVKYIFELNPDHVLVK----RAADTEDEAKFSEWVELLLDQALLAERGTLEDPNLFIRRM 618          
BLAST of CK933992 vs. ExPASy Swiss-Prot
Match: HTPG_SHIDS (Chaperone protein htpG OS=Shigella dysenteriae serotype 1 (strain Sd197) GN=htpG PE=3 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 1.696e-15
Identity = 56/175 (32.00%), Postives = 90/175 (51.43%), Query Frame = 2
Query:    2 GYEVIFFTDPVDEYLMQYLMDYEDKKFQNVSK--EGLKLGKDTKDKELKESFKELTKWWK--GALASENVDDVKVSNRLDNTPCVVVTSKYGWSANMERIMQSQTLSDASKQAYMRGKRVLEINPRHPIIKELRERVVKDPEDAGVQQTAQLIYQTALMESGFSLNDPKDFASRI 514
            G EV+  +D +DE++M YL +++ K FQ+VSK  E L+   D  D+  KE+ K LT +     AL  E V DV++++RL +TP +V T     S  M ++        A+ Q     K + E+NP H ++K    R     ++A   +  +L+   AL+    +L DP  F  R+
Sbjct:  454 GIEVLLLSDRIDEWMMNYLTEFDGKPFQSVSKVDESLEKLADEVDESAKEAEKALTPFIDRVKALLGERVKDVRLTHRLTDTPAIVSTDADEMSTQMAKLFA------AAGQKVPEVKYIFELNPDHVLVK----RAADTEDEAKFSEWVELLLDQALLAERGTLEDPNLFIRRM 618          
BLAST of CK933992 vs. ExPASy Swiss-Prot
Match: HTPG_SHIBS (Chaperone protein htpG OS=Shigella boydii serotype 4 (strain Sb227) GN=htpG PE=3 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 1.696e-15
Identity = 56/175 (32.00%), Postives = 90/175 (51.43%), Query Frame = 2
Query:    2 GYEVIFFTDPVDEYLMQYLMDYEDKKFQNVSK--EGLKLGKDTKDKELKESFKELTKWWK--GALASENVDDVKVSNRLDNTPCVVVTSKYGWSANMERIMQSQTLSDASKQAYMRGKRVLEINPRHPIIKELRERVVKDPEDAGVQQTAQLIYQTALMESGFSLNDPKDFASRI 514
            G EV+  +D +DE++M YL +++ K FQ+VSK  E L+   D  D+  KE+ K LT +     AL  E V DV++++RL +TP +V T     S  M ++        A+ Q     K + E+NP H ++K    R     ++A   +  +L+   AL+    +L DP  F  R+
Sbjct:  454 GIEVLLLSDRIDEWMMNYLTEFDGKPFQSVSKVDESLEKLADEVDESAKEAEKALTPFIDRVKALLGERVKDVRLTHRLTDTPAIVSTDADEMSTQMAKLFA------AAGQKVPEVKYIFELNPDHVLVK----RAADTEDEAKFSEWVELLLDQALLAERGTLEDPNLFIRRM 618          
BLAST of CK933992 vs. ExPASy Swiss-Prot
Match: HTPG_SHESR (Chaperone protein htpG OS=Shewanella sp. (strain MR-7) GN=htpG PE=3 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 1.696e-15
Identity = 57/173 (32.95%), Postives = 94/173 (54.34%), Query Frame = 2
Query:    2 GYEVIFFTDPVDEYLMQYLMDYEDKKFQNVSKEGLKLGK--DTKDKELKESFKE----LTKWWKGALASENVDDVKVSNRLDNTPCVVVTSKYGWSANMERIMQSQTLSDASKQAYMRGKRVLEINPRHPIIKELRERVVKDPEDAGVQQTAQLIYQTALMESGFSLNDPKDF 502
            G EV+  ++ +DE+L+ +L +Y++K+  +V++  L+LG+  D  +KE +E   E    L +  K AL + +V DVKV++RL +TP  VVT +   S+ M ++MQ      A+ Q     K   EINP HP++  L +      ++A     + L+ Q A +    SL DP  F
Sbjct:  463 GIEVLLMSERIDEWLINHLTEYKEKQLHSVTRGELELGELEDAAEKEAQEKLAEESAPLVERIKAALGA-SVADVKVTSRLTDTPACVVTGEGEMSSQMIKLMQ------AAGQPVPEVKPTFEINPAHPLVSRLNDL----QDEAAFADWSNLLLQQAQLSEKGSLADPSAF 624          
BLAST of CK933992 vs. ExPASy Swiss-Prot
Match: HTPG_SHESM (Chaperone protein htpG OS=Shewanella sp. (strain MR-4) GN=htpG PE=3 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 1.696e-15
Identity = 57/173 (32.95%), Postives = 94/173 (54.34%), Query Frame = 2
Query:    2 GYEVIFFTDPVDEYLMQYLMDYEDKKFQNVSKEGLKLGK--DTKDKELKESFKE----LTKWWKGALASENVDDVKVSNRLDNTPCVVVTSKYGWSANMERIMQSQTLSDASKQAYMRGKRVLEINPRHPIIKELRERVVKDPEDAGVQQTAQLIYQTALMESGFSLNDPKDF 502
            G EV+  ++ +DE+L+ +L +Y++K+  +V++  L+LG+  D  +KE +E   E    L +  K AL + +V DVKV++RL +TP  VVT +   S+ M ++MQ      A+ Q     K   EINP HP++  L +      ++A     + L+ Q A +    SL DP  F
Sbjct:  463 GIEVLLMSERIDEWLINHLTEYKEKQLHSVTRGELELGELEDAAEKEAQEKLAEESAPLVERIKAALGA-SVADVKVTSRLTDTPACVVTGEGEMSSQMIKLMQ------AAGQPVPEVKPTFEINPAHPLVSRLNDL----QDEAAFADWSNLLLQQAQLSEKGSLADPSAF 624          
BLAST of CK933992 vs. ExPASy Swiss-Prot
Match: HTPG_SALTO (Chaperone protein htpG OS=Salinispora tropica (strain ATCC BAA-916 / DSM 44818 / CNB-440) GN=htpG PE=3 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 1.696e-15
Identity = 50/174 (28.74%), Postives = 91/174 (52.30%), Query Frame = 2
Query:    2 GYEVIFFTDPVDEYLMQYLMDYEDKKFQNVSKEGLKL-------GKDTKDKELKESFKELTKWWKGALASENVDDVKVSNRLDNTPCVVVTSKYGWSANMERIMQSQTLSDASKQAYMRGKRVLEINPRHPIIKELRERVVKDPEDAGVQQTAQLIYQTALMESGFSLNDPKDF 502
            G+EV+  TDPVDE  ++ + +YE K  ++V+K  + L         + + +  +  + +L  W    LA + V +V++S RL  +P  VV   +  +  +E++ +      A      + KR+LE+NP HP++  LR+   +   +  +++TA+L+Y  AL+  G  L DP  F
Sbjct:  458 GFEVLLLTDPVDEVWVERVGEYEGKTLRSVAKGQVDLDTEEERSAAEAERERQRTEYADLLTWLSSTLADQ-VREVRLSARLTTSPACVVGDAHDVTPTLEKMYR------AMGHEVPQVKRILELNPTHPLVSGLRKAREQGVTEESLKETAELLYGMALLAEGGELADPSHF 624          
BLAST of CK933992 vs. ExPASy Swiss-Prot
Match: HTPG_SALAI (Chaperone protein htpG OS=Salinispora arenicola (strain CNS-205) GN=htpG PE=3 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 1.696e-15
Identity = 50/173 (28.90%), Postives = 93/173 (53.76%), Query Frame = 2
Query:    2 GYEVIFFTDPVDEYLMQYLMDYEDKKFQNVSKEGLKLGKDTKDKELK-ESFKELTKW-----WKGALASENVDDVKVSNRLDNTPCVVVTSKYGWSANMERIMQSQTLSDASKQAYMRGKRVLEINPRHPIIKELRERVVKDPEDAGVQQTAQLIYQTALMESGFSLNDPKDF 502
            G+EV+  TDPVDE  ++ + +Y+ K  ++V+K  + L  D +    + E  ++ T++     W G+  ++ V +V++S RL  +P  VV   +  +  +E++ +      A      + KR+LE+NP HP++  LR+   +   +  + +TA+L+Y  AL+  G  L DP  F
Sbjct:  458 GFEVLLLTDPVDEVWVERVGEYDGKTLRSVAKGQVDLDTDEERSAAEAERERQRTEYADLLTWLGSALADQVREVRLSARLTTSPACVVGDAHDVTPTLEKMYR------AMGHEVPQVKRILELNPTHPLVSGLRKAREQGATEDSLTETAELLYGMALLAEGGELADPSRF 624          
BLAST of CK933992 vs. ExPASy Swiss-Prot
Match: HTPG_RUTMC (Chaperone protein htpG OS=Ruthia magnifica subsp. Calyptogena magnifica GN=htpG PE=3 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 1.696e-15
Identity = 53/175 (30.29%), Postives = 99/175 (56.57%), Query Frame = 2
Query:    8 EVIFFTDPVDEYLMQYLMDYEDKKFQNVSK---EGLKLGKDTKDKE-LKESFKELTKWWKGALASENVDDVKVSNRLDNTPCVVVTSKYGWSANMERIMQS--QTLSDASKQAYMRGKRVLEINPRHPIIKELRERVVKDPEDAGVQQTAQLIYQTALMESGFSLNDPKDFASRI 514
            EV+  +D VDE+++     +ED   ++++K   EGL   ++ K KE + ++F+++ +  +  L ++ V ++KVS+RL ++P  +V  +     NMERIM+S  Q + D         K +LEINP HP++K+L+ ++ +D          ++++  A++  G  L DP +F  RI
Sbjct:  454 EVLLLSDRVDEWMVNNFGKFEDVPLKSITKGDLEGLDSKEEKKAKEEVSKNFEKVIEKMQKILDTQ-VKEIKVSSRLSDSPSCLVVDENEMGGNMERIMKSLGQDVPDT--------KPILEINPNHPLVKKLKTKIDED--------LVKVLFDQAVLSEGVQLKDPAEFVKRI 611          
The following BLAST results are available for this feature:
BLAST of CK933992 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 315
Match NameE-valueIdentityDescription
HTPG_WOLPM1.696e-1526.82Chaperone protein htpG OS=Wolbachia pipientis wMel... [more]
HTPG_SHISS1.696e-1532.00Chaperone protein htpG OS=Shigella sonnei (strain ... [more]
HTPG_SHIFL1.696e-1532.00Chaperone protein htpG OS=Shigella flexneri GN=htp... [more]
HTPG_SHIDS1.696e-1532.00Chaperone protein htpG OS=Shigella dysenteriae ser... [more]
HTPG_SHIBS1.696e-1532.00Chaperone protein htpG OS=Shigella boydii serotype... [more]
HTPG_SHESR1.696e-1532.95Chaperone protein htpG OS=Shewanella sp. (strain M... [more]
HTPG_SHESM1.696e-1532.95Chaperone protein htpG OS=Shewanella sp. (strain M... [more]
HTPG_SALTO1.696e-1528.74Chaperone protein htpG OS=Salinispora tropica (str... [more]
HTPG_SALAI1.696e-1528.90Chaperone protein htpG OS=Salinispora arenicola (s... [more]
HTPG_RUTMC1.696e-1530.29Chaperone protein htpG OS=Ruthia magnifica subsp. ... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004542_G03 Developing fruit peel at 38 DAFB Citrus sinensis cDNA clone P38DAB10001_IVF_G03 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK933992 ID=CK933992; Name=CK933992; organism=Citrus sinensis; type=EST; length=894bp
GGGCTATGAGGTGATTTTCTTCACTGATCCAGTTGATGAATACCTGATGC
AATACCTGATGGATTATGAAGACAAAAAGTTCCAAAATGTATCTAAAGAG
GGTCTTAAACTTGGTAAAGACACTAAAGATAAGGAACTTAAGGAGTCATT
CAAGGAGCTCACGAAATGGTGGAAGGGTGCTCTTGCCAGCGAGAACGTGG
ATGATGTGAAAGTAAGCAACCGCTTGGATAACACCCCTTGCGTAGTTGTG
ACATCAAAGTATGGTTGGAGTGCGAATATGGAGAGGATCATGCAGTCTCA
GACTCTCTCAGATGCTAGCAAGCAAGCATATATGCGGGGCAAGAGGGTGC
TTGAAATCAATCCAAGGCATCCAATCATCAAAGAGCTCCGGGAGAGAGTC
GTCAAGGACCCTGAGGATGCGGGTGTCCAGCAAACAGCCCAACTCATTTA
CCAGACGGCACTCATGGAGAGTGGCTTTTCGCTCAATGATCCCAAGGATT
TTGCCTCCCGAATTTACAGCACGGTGAAATCTAGCCTTAACATTAGCCCT
GATGCAGCTGTTGAGGAGGAAGATGATGTAGAAGAGACTGATGCTGACAC
TGAAATGAAAGAATCTTCGGCTGCCAAAGAGGACGTGGATACAGAGTATT
CTGGCAAGGATGAGTTGTAGATTGCCTAATAAAAGCATGGGCAACAACAT
CCCAGTTTCTTAGGAAAGCATAAACGCTCTGCATAGTGCGTTCATTTCCA
GTTTTGAAAACTTTGGTGAAAAAACGTTTTAGATCTTAGATTCAATGTAA
CCATAATCACCGGGAATTTTGTCTTTTAACAGTTGACACTATCAATTATG
GATGAATCAGCGTGTCAAAAAAAAAAAAAAAAAAAAAAAAAAAA
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