CK933992

Overview
NameCK933992
Unique NameCK933992
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length894
Libraries
Library NameType
Developing fruit peel at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK933992 vs. ExPASy Swiss-Prot
Match: HTPG_ECO57 (Chaperone protein htpG OS=Escherichia coli O157:H7 GN=htpG PE=3 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 1.696e-15
Identity = 56/175 (32.00%), Postives = 90/175 (51.43%), Query Frame = 2
Query:    2 GYEVIFFTDPVDEYLMQYLMDYEDKKFQNVSK--EGLKLGKDTKDKELKESFKELTKWWK--GALASENVDDVKVSNRLDNTPCVVVTSKYGWSANMERIMQSQTLSDASKQAYMRGKRVLEINPRHPIIKELRERVVKDPEDAGVQQTAQLIYQTALMESGFSLNDPKDFASRI 514
            G EV+  +D +DE++M YL +++ K FQ+VSK  E L+   D  D+  KE+ K LT +     AL  E V DV++++RL +TP +V T     S  M ++        A+ Q     K + E+NP H ++K    R     ++A   +  +L+   AL+    +L DP  F  R+
Sbjct:  454 GIEVLLLSDRIDEWMMNYLTEFDGKPFQSVSKVDESLEKLADEVDESAKEAEKALTPFIDRVKALLGERVKDVRLTHRLTDTPAIVSTDADEMSTQMAKLFA------AAGQKVPEVKYIFELNPDHVLVK----RAADTEDEAKFSEWVELLLDQALLAERGTLEDPNLFIRRM 618          
BLAST of CK933992 vs. ExPASy Swiss-Prot
Match: HTPG_ECO24 (Chaperone protein htpG OS=Escherichia coli O139:H28 (strain E24377A / ETEC) GN=htpG PE=3 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 1.696e-15
Identity = 56/175 (32.00%), Postives = 90/175 (51.43%), Query Frame = 2
Query:    2 GYEVIFFTDPVDEYLMQYLMDYEDKKFQNVSK--EGLKLGKDTKDKELKESFKELTKWWK--GALASENVDDVKVSNRLDNTPCVVVTSKYGWSANMERIMQSQTLSDASKQAYMRGKRVLEINPRHPIIKELRERVVKDPEDAGVQQTAQLIYQTALMESGFSLNDPKDFASRI 514
            G EV+  +D +DE++M YL +++ K FQ+VSK  E L+   D  D+  KE+ K LT +     AL  E V DV++++RL +TP +V T     S  M ++        A+ Q     K + E+NP H ++K    R     ++A   +  +L+   AL+    +L DP  F  R+
Sbjct:  454 GIEVLLLSDRIDEWMMNYLTEFDGKPFQSVSKVDESLEKLADEVDESAKEAEKALTPFIDRVKALLGERVKDVRLTHRLTDTPAIVSTDADEMSTQMAKLFA------AAGQKVPEVKYIFELNPDHVLVK----RAADTEDEAKFSEWVELLLDQALLAERGTLEDPNLFIRRM 618          
BLAST of CK933992 vs. ExPASy Swiss-Prot
Match: HTPG_CITK8 (Chaperone protein htpG OS=Citrobacter koseri (strain ATCC BAA-895 / CDC 4225-83 / SGSC4696) GN=htpG PE=3 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 1.696e-15
Identity = 54/175 (30.86%), Postives = 90/175 (51.43%), Query Frame = 2
Query:    2 GYEVIFFTDPVDEYLMQYLMDYEDKKFQNVSK--EGLKLGKDTKDKELKESFKELTKWWK--GALASENVDDVKVSNRLDNTPCVVVTSKYGWSANMERIMQSQTLSDASKQAYMRGKRVLEINPRHPIIKELRERVVKDPEDAGVQQTAQLIYQTALMESGFSLNDPKDFASRI 514
            G EV+  +D +DE++M YL +++ K FQ+VSK  E L+   D  D+  KE+ K LT + +    L  + V +V++++RL +TP +V T     S  M ++        A+ QA    K + E+NP H ++K    R     ++A   +  +L+   AL     +L DP  F  R+
Sbjct:  454 GIEVLLLSDRIDEWMMNYLTEFDGKAFQSVSKVDESLEKLADEVDESAKEAEKALTPFVERVKTLLGDRVKEVRLTHRLTDTPAIVTTDADEMSTQMAKLFA------AAGQAVPEVKYIFELNPDHVLVK----RTADTQDEAQFNEWVELLLDQALFAERGTLEDPNQFIRRM 618          
BLAST of CK933992 vs. ExPASy Swiss-Prot
Match: HTPG_PSEA6 (Chaperone protein htpG OS=Pseudoalteromonas atlantica (strain T6c / BAA-1087) GN=htpG PE=3 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 2.215e-15
Identity = 59/177 (33.33%), Postives = 93/177 (52.54%), Query Frame = 2
Query:    2 GYEVIFFTDPVDEYLMQYLMDYEDKKFQNVSKEGLKLGKDTKDKELKESFKELTKWWKG------ALASENVDDVKVSNRLDNTPCVVVTSKYGWSANMERIMQSQTLSDASKQAYMRGKRVLEINPRHPIIKELRERVVKDPEDAGVQQTAQLIYQTALMESGFSLNDPKDFASRI 514
            G EV+  +D VDE+LM +L ++++K FQ+++   L LG D  D++ K++ +E  K  +G       +  + V +VK ++RL ++P  +V    G S  M ++MQ      A+ Q     K   E+NP H ++K L +   +D E  G Q T  L  Q AL E G SL DP  F   +
Sbjct:  466 GIEVLLMSDRVDEWLMSHLTEFDEKSFQSITHGELDLG-DLDDEDSKKAQEEAEKQVEGLTERVKTVLGDKVAEVKFTHRLTDSPACIVADGTGMSTQMIKLMQ------AAGQPVPEAKYHFELNPEHSLVKMLADE--QDEERFG-QWTEVLFDQAALSEQG-SLKDPAAFVHNL 631          
BLAST of CK933992 vs. ExPASy Swiss-Prot
Match: HTPG_YERPS (Chaperone protein htpG OS=Yersinia pseudotuberculosis GN=htpG PE=3 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 2.893e-15
Identity = 55/175 (31.43%), Postives = 89/175 (50.86%), Query Frame = 2
Query:    2 GYEVIFFTDPVDEYLMQYLMDYEDKKFQNVSKEGLKLGK--DTKDKELKESFKELTKWWK--GALASENVDDVKVSNRLDNTPCVVVTSKYGWSANMERIMQSQTLSDASKQAYMRGKRVLEINPRHPIIKELRERVVKDPEDAGVQQTAQLIYQTALMESGFSLNDPKDFASRI 514
            G EV+  +D +DE++M YL ++E K FQ+VSK    L K  D ++ E +E+ K L  + +    L  E V DV++++RL +TP +V T     S  M ++        A+ Q     K + E+NP H ++K    R  +  +D    Q  +L+   AL+    +L DP  F  R+
Sbjct:  454 GIEVLLLSDRIDEWMMSYLTEFEGKAFQSVSKADDSLNKLADEENPEQQEAEKALEPFVERVKTLLGERVKDVRLTHRLTDTPAIVTTDADEMSTQMAKLFA------AAGQQAPEVKYIFELNPDHGLVK----RAAEVTDDTQFAQWVELLLDQALLAERGTLEDPNQFIRRM 618          
BLAST of CK933992 vs. ExPASy Swiss-Prot
Match: HTPG_YERPP (Chaperone protein htpG OS=Yersinia pestis (strain Pestoides F) GN=htpG PE=3 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 2.893e-15
Identity = 55/175 (31.43%), Postives = 89/175 (50.86%), Query Frame = 2
Query:    2 GYEVIFFTDPVDEYLMQYLMDYEDKKFQNVSKEGLKLGK--DTKDKELKESFKELTKWWK--GALASENVDDVKVSNRLDNTPCVVVTSKYGWSANMERIMQSQTLSDASKQAYMRGKRVLEINPRHPIIKELRERVVKDPEDAGVQQTAQLIYQTALMESGFSLNDPKDFASRI 514
            G EV+  +D +DE++M YL ++E K FQ+VSK    L K  D ++ E +E+ K L  + +    L  E V DV++++RL +TP +V T     S  M ++        A+ Q     K + E+NP H ++K    R  +  +D    Q  +L+   AL+    +L DP  F  R+
Sbjct:  454 GIEVLLLSDRIDEWMMSYLTEFEGKAFQSVSKADDSLNKLADEENPEQQEAEKALEPFVERVKTLLGERVKDVRLTHRLTDTPAIVTTDADEMSTQMAKLFA------AAGQQAPEVKYIFELNPDHGLVK----RAAEVTDDTQFAQWVELLLDQALLAERGTLEDPNQFIRRM 618          
BLAST of CK933992 vs. ExPASy Swiss-Prot
Match: HTPG_YERPN (Chaperone protein htpG OS=Yersinia pestis bv. Antiqua (strain Nepal516) GN=htpG PE=3 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 2.893e-15
Identity = 55/175 (31.43%), Postives = 89/175 (50.86%), Query Frame = 2
Query:    2 GYEVIFFTDPVDEYLMQYLMDYEDKKFQNVSKEGLKLGK--DTKDKELKESFKELTKWWK--GALASENVDDVKVSNRLDNTPCVVVTSKYGWSANMERIMQSQTLSDASKQAYMRGKRVLEINPRHPIIKELRERVVKDPEDAGVQQTAQLIYQTALMESGFSLNDPKDFASRI 514
            G EV+  +D +DE++M YL ++E K FQ+VSK    L K  D ++ E +E+ K L  + +    L  E V DV++++RL +TP +V T     S  M ++        A+ Q     K + E+NP H ++K    R  +  +D    Q  +L+   AL+    +L DP  F  R+
Sbjct:  454 GIEVLLLSDRIDEWMMSYLTEFEGKAFQSVSKADDSLNKLADEENPEQQEAEKALEPFVERVKTLLGERVKDVRLTHRLTDTPAIVTTDADEMSTQMAKLFA------AAGQQAPEVKYIFELNPDHGLVK----RAAEVTDDTQFAQWVELLLDQALLAERGTLEDPNQFIRRM 618          
BLAST of CK933992 vs. ExPASy Swiss-Prot
Match: HTPG_YERPE (Chaperone protein htpG OS=Yersinia pestis GN=htpG PE=3 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 2.893e-15
Identity = 55/175 (31.43%), Postives = 89/175 (50.86%), Query Frame = 2
Query:    2 GYEVIFFTDPVDEYLMQYLMDYEDKKFQNVSKEGLKLGK--DTKDKELKESFKELTKWWK--GALASENVDDVKVSNRLDNTPCVVVTSKYGWSANMERIMQSQTLSDASKQAYMRGKRVLEINPRHPIIKELRERVVKDPEDAGVQQTAQLIYQTALMESGFSLNDPKDFASRI 514
            G EV+  +D +DE++M YL ++E K FQ+VSK    L K  D ++ E +E+ K L  + +    L  E V DV++++RL +TP +V T     S  M ++        A+ Q     K + E+NP H ++K    R  +  +D    Q  +L+   AL+    +L DP  F  R+
Sbjct:  452 GIEVLLLSDRIDEWMMSYLTEFEGKAFQSVSKADDSLNKLADEENPEQQEAEKALEPFVERVKTLLGERVKDVRLTHRLTDTPAIVTTDADEMSTQMAKLFA------AAGQQAPEVKYIFELNPDHGLVK----RAAEVTDDTQFAQWVELLLDQALLAERGTLEDPNQFIRRM 616          
BLAST of CK933992 vs. ExPASy Swiss-Prot
Match: HTPG_YERPA (Chaperone protein htpG OS=Yersinia pestis bv. Antiqua (strain Antiqua) GN=htpG PE=3 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 2.893e-15
Identity = 55/175 (31.43%), Postives = 89/175 (50.86%), Query Frame = 2
Query:    2 GYEVIFFTDPVDEYLMQYLMDYEDKKFQNVSKEGLKLGK--DTKDKELKESFKELTKWWK--GALASENVDDVKVSNRLDNTPCVVVTSKYGWSANMERIMQSQTLSDASKQAYMRGKRVLEINPRHPIIKELRERVVKDPEDAGVQQTAQLIYQTALMESGFSLNDPKDFASRI 514
            G EV+  +D +DE++M YL ++E K FQ+VSK    L K  D ++ E +E+ K L  + +    L  E V DV++++RL +TP +V T     S  M ++        A+ Q     K + E+NP H ++K    R  +  +D    Q  +L+   AL+    +L DP  F  R+
Sbjct:  454 GIEVLLLSDRIDEWMMSYLTEFEGKAFQSVSKADDSLNKLADEENPEQQEAEKALEPFVERVKTLLGERVKDVRLTHRLTDTPAIVTTDADEMSTQMAKLFA------AAGQQAPEVKYIFELNPDHGLVK----RAAEVTDDTQFAQWVELLLDQALLAERGTLEDPNQFIRRM 618          
BLAST of CK933992 vs. ExPASy Swiss-Prot
Match: HTPG_XANCP (Chaperone protein htpG OS=Xanthomonas campestris pv. campestris GN=htpG PE=3 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 2.893e-15
Identity = 54/177 (30.51%), Postives = 97/177 (54.80%), Query Frame = 2
Query:    2 GYEVIFFTDPVDEYLMQYLMDYEDKKFQNVSKEGLKLGKDTKDKELKESFKELTKWWKG------ALASENVDDVKVSNRLDNTPCVVVTSKYGWSANMERIMQSQTLSDASKQAYMRGKRVLEINPRHPIIKELRERVVKDPEDAGVQQTAQLIYQTALMESGFSLNDPKDFASRI 514
            G EV+  TD +DE+LM YL +++ K F +V++  L LGK    +E K++ +E+ K  +G      A   ++V +V+VS+RL ++P ++   +      M +++      +AS QA    K V E NP HP+I++L     +D +  G    +++++  A + +G SL DP  +  R+
Sbjct:  460 GIEVLLLTDRIDEWLMSYLTEFDSKSFVDVARGDLDLGK-LDSEEDKKAQEEVAKSKEGLASRIKAALGDDVAEVRVSHRLTDSPAILAIGQGDLGLQMRQLL------EASGQAVPETKPVFEFNPAHPLIEKLDAE--QDMDRFG--DLSRVLFDQAALAAGDSLKDPAGYVRRL 625          
The following BLAST results are available for this feature:
BLAST of CK933992 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 315
Match NameE-valueIdentityDescription
HTPG_ECO571.696e-1532.00Chaperone protein htpG OS=Escherichia coli O157:H7... [more]
HTPG_ECO241.696e-1532.00Chaperone protein htpG OS=Escherichia coli O139:H2... [more]
HTPG_CITK81.696e-1530.86Chaperone protein htpG OS=Citrobacter koseri (stra... [more]
HTPG_PSEA62.215e-1533.33Chaperone protein htpG OS=Pseudoalteromonas atlant... [more]
HTPG_YERPS2.893e-1531.43Chaperone protein htpG OS=Yersinia pseudotuberculo... [more]
HTPG_YERPP2.893e-1531.43Chaperone protein htpG OS=Yersinia pestis (strain ... [more]
HTPG_YERPN2.893e-1531.43Chaperone protein htpG OS=Yersinia pestis bv. Anti... [more]
HTPG_YERPE2.893e-1531.43Chaperone protein htpG OS=Yersinia pestis GN=htpG ... [more]
HTPG_YERPA2.893e-1531.43Chaperone protein htpG OS=Yersinia pestis bv. Anti... [more]
HTPG_XANCP2.893e-1530.51Chaperone protein htpG OS=Xanthomonas campestris p... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004542_G03 Developing fruit peel at 38 DAFB Citrus sinensis cDNA clone P38DAB10001_IVF_G03 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK933992 ID=CK933992; Name=CK933992; organism=Citrus sinensis; type=EST; length=894bp
GGGCTATGAGGTGATTTTCTTCACTGATCCAGTTGATGAATACCTGATGC
AATACCTGATGGATTATGAAGACAAAAAGTTCCAAAATGTATCTAAAGAG
GGTCTTAAACTTGGTAAAGACACTAAAGATAAGGAACTTAAGGAGTCATT
CAAGGAGCTCACGAAATGGTGGAAGGGTGCTCTTGCCAGCGAGAACGTGG
ATGATGTGAAAGTAAGCAACCGCTTGGATAACACCCCTTGCGTAGTTGTG
ACATCAAAGTATGGTTGGAGTGCGAATATGGAGAGGATCATGCAGTCTCA
GACTCTCTCAGATGCTAGCAAGCAAGCATATATGCGGGGCAAGAGGGTGC
TTGAAATCAATCCAAGGCATCCAATCATCAAAGAGCTCCGGGAGAGAGTC
GTCAAGGACCCTGAGGATGCGGGTGTCCAGCAAACAGCCCAACTCATTTA
CCAGACGGCACTCATGGAGAGTGGCTTTTCGCTCAATGATCCCAAGGATT
TTGCCTCCCGAATTTACAGCACGGTGAAATCTAGCCTTAACATTAGCCCT
GATGCAGCTGTTGAGGAGGAAGATGATGTAGAAGAGACTGATGCTGACAC
TGAAATGAAAGAATCTTCGGCTGCCAAAGAGGACGTGGATACAGAGTATT
CTGGCAAGGATGAGTTGTAGATTGCCTAATAAAAGCATGGGCAACAACAT
CCCAGTTTCTTAGGAAAGCATAAACGCTCTGCATAGTGCGTTCATTTCCA
GTTTTGAAAACTTTGGTGAAAAAACGTTTTAGATCTTAGATTCAATGTAA
CCATAATCACCGGGAATTTTGTCTTTTAACAGTTGACACTATCAATTATG
GATGAATCAGCGTGTCAAAAAAAAAAAAAAAAAAAAAAAAAAAA
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