CK933992

Overview
NameCK933992
Unique NameCK933992
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length894
Libraries
Library NameType
Developing fruit peel at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK933992 vs. ExPASy Swiss-Prot
Match: HTPG_SALTY (Chaperone protein htpG OS=Salmonella typhimurium GN=htpG PE=3 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 1.875e-14
Identity = 51/175 (29.14%), Postives = 90/175 (51.43%), Query Frame = 2
Query:    2 GYEVIFFTDPVDEYLMQYLMDYEDKKFQNVSK--EGLKLGKDTKDKELKESFKELTKWWK--GALASENVDDVKVSNRLDNTPCVVVTSKYGWSANMERIMQSQTLSDASKQAYMRGKRVLEINPRHPIIKELRERVVKDPEDAGVQQTAQLIYQTALMESGFSLNDPKDFASRI 514
            G EV+  +D +DE++M YL +++ K FQ+V+K  E ++   D  D+  KE+ K L  + +    L  + V DV++++RL +TP +V T     S  M ++        A+ Q+    K + E+NP H ++K    R     ++A  ++  +L+   AL     +L DP  F  R+
Sbjct:  454 GIEVLLLSDRIDEWMMNYLTEFDGKAFQSVAKADESIEKLADEVDENAKEAEKALEPFVERVKTLLGDRVKDVRLTHRLTDTPAIVTTDADEMSTQMAKLFA------AAGQSVPEVKYIFELNPDHVLVK----RTADTKDEAQFKEWVELLLDQALFAERGTLEDPNQFIRRM 618          
BLAST of CK933992 vs. ExPASy Swiss-Prot
Match: HTPG_PSYCK (Chaperone protein htpG OS=Psychrobacter cryohalolentis (strain K5) GN=htpG PE=3 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 1.875e-14
Identity = 58/177 (32.77%), Postives = 91/177 (51.41%), Query Frame = 2
Query:    2 GYEVIFFTDPVDEYLMQYLMDYEDKKFQNVSKEGLKLG--KDTKDK----ELKESFKELTKWWKGALASENVDDVKVSNRLDNTPCVVVTSKYGWSANMERIMQSQTLSDASKQAYMRGKRVLEINPRHPIIKELRERVVKDPEDAGVQQTAQLIYQTALMESGFSLNDPKDFASRI 514
            G EVI  T  VDE+ M +L  +++   QN++K  + LG  +D  +K    + +E+ K +    K AL  E   DVKVS RL ++P  +V  +   S  M ++++         Q     K  LE+NP HP+IK+L E   +  ED    + AQ+I+  AL+  G  L+DP  +  R+
Sbjct:  494 GIEVILMTSRVDEWAMNFLTSFDETPLQNIAKGAVDLGDLQDEAEKAEAEKAQETMKPIVDKLKTAL-GERAKDVKVSTRLVDSPACLVVGEGELSPQMIQMLKQM------GQDVPESKPTLEVNPDHPLIKKL-ESSEQSAED--FDKLAQVIFDQALLADGGQLDDPAAYLRRV 660          
BLAST of CK933992 vs. ExPASy Swiss-Prot
Match: HTPG_BUCBP (Chaperone protein htpG OS=Buchnera aphidicola subsp. Baizongia pistaciae GN=htpG PE=3 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 1.875e-14
Identity = 47/174 (27.01%), Postives = 93/174 (53.45%), Query Frame = 2
Query:    8 EVIFFTDPVDEYLMQYLMDYEDKKFQNVSKEGLKLGK-----DTKDKELKESFKELTKWWKGALASENVDDVKVSNRLDNTPCVVVTSKYGWSANMERIMQSQTLSDASKQAYMRGKRVLEINPRHPIIKELRERVVKDPEDAGVQQTAQLIYQTALMESGFSLNDPKDFASRI 514
            +V+  +D +DE++M YL++Y +KKFQ+VSK+   + K     +++++  +E+  +     K  L S+ + D++ +++L NTP +V+T     S  M +      L  A+ Q     K +LEINP H +IK++      +  +   +     +++  L+    +L++P  F +RI
Sbjct:  457 DVLILSDKIDEWMMNYLIEYNEKKFQSVSKDDKSIEKLVHEQNSQNETYQENMNDFLNRAKKTL-SDKIKDIRFTHKLTNTPAMVITDSNEMSTQMAK------LFSAAGQTVPTIKYILEINPNHLLIKKIN----NEKNEKKFKNWINFLFEQCLLAEKNTLDNPNKFIARI 619          
BLAST of CK933992 vs. ExPASy Swiss-Prot
Match: HTPG_AERHH (Chaperone protein htpG OS=Aeromonas hydrophila subsp. hydrophila (strain ATCC 7966 / NCIB 9240) GN=htpG PE=3 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 1.875e-14
Identity = 55/177 (31.07%), Postives = 97/177 (54.80%), Query Frame = 2
Query:    2 GYEVIFFTDPVDEYLMQYLMDYEDKKFQNVSKEGLKLGKDTKDKELKESFKELTKWWKGALA------SENVDDVKVSNRLDNTPCVVVTSKYGWSANMERIMQSQTLSDASKQAYMRGKRVLEINPRHPIIKELRERVVKDPEDAGVQQTAQLIYQTALMESGFSLNDPKDFASRI 514
            G EV+   + VDE+LM +L +++ K+  +V++  L LG D +D+  K++ +E  K   G +        E V +V+V++RL ++P  +VT  +G S  M ++M+      A+ Q     K +LE+NP H ++K+L    ++D  +A   +   L+++ A +     LNDP  F SRI
Sbjct:  469 GVEVLLMWERVDEWLMSHLTEFDGKQLVSVTRGELDLG-DLEDEASKQAQEEAEKANAGLVERVKQSLGEAVKEVRVTHRLTDSPSCIVTDAHGMSTQMIKLMR------AAGQPVPEQKYILELNPDHALVKKL--GAIED--EALFGEWVTLLHEQAQLAEQGGLNDPASFVSRI 634          
BLAST of CK933992 vs. ExPASy Swiss-Prot
Match: HTPG_YERE8 (Chaperone protein htpG OS=Yersinia enterocolitica serotype O:8 / biotype 1B (strain 8081) GN=htpG PE=3 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 2.449e-14
Identity = 53/175 (30.29%), Postives = 87/175 (49.71%), Query Frame = 2
Query:    2 GYEVIFFTDPVDEYLMQYLMDYEDKKFQNVSKEGLKLGK--DTKDKELKESFKELTKWWK--GALASENVDDVKVSNRLDNTPCVVVTSKYGWSANMERIMQSQTLSDASKQAYMRGKRVLEINPRHPIIKELRERVVKDPEDAGVQQTAQLIYQTALMESGFSLNDPKDFASRI 514
            G EV+  +D +DE++M YL +++ K FQ+VSK    L K  D +  E +E+ K L  + +    L  E V DV++++RL +TP +V T     S  M ++        A+ Q     K + E+NP H ++K    R     +D    +  +L+   AL+    +L DP  F  R+
Sbjct:  454 GIEVLLLSDRIDEWMMSYLTEFDGKAFQSVSKADDSLNKLADEERPEQQEADKALEPFVERVKTLLGERVKDVRLTHRLTDTPAIVTTDADEMSTQMAKLFA------AAGQQAPEVKYIFELNPEHSLVK----RAADVADDTQFAEWVELLLDQALLAERGTLEDPNQFIRRM 618          
BLAST of CK933992 vs. ExPASy Swiss-Prot
Match: HTPG_SALCH (Chaperone protein htpG OS=Salmonella choleraesuis GN=htpG PE=3 SV=2)

HSP 1 Score: 79.7221 bits (195), Expect = 2.449e-14
Identity = 51/175 (29.14%), Postives = 90/175 (51.43%), Query Frame = 2
Query:    2 GYEVIFFTDPVDEYLMQYLMDYEDKKFQNVSK--EGLKLGKDTKDKELKESFKELTKWWK--GALASENVDDVKVSNRLDNTPCVVVTSKYGWSANMERIMQSQTLSDASKQAYMRGKRVLEINPRHPIIKELRERVVKDPEDAGVQQTAQLIYQTALMESGFSLNDPKDFASRI 514
            G EV+  +D +DE++M YL +++ K FQ+V+K  E ++   D  D+  KE+ K L  + +    L  + V DV++++RL +TP +V T     S  M ++        A+ Q+    K + E+NP H ++K    R     ++A  ++  +L+   AL     +L DP  F  R+
Sbjct:  454 GIEVLLLSDRIDEWMMNYLTEFDGKAFQSVAKADESIEKLADEVDENAKEAEKVLEPFVERVKTLLGDRVKDVRLTHRLTDTPAIVTTDADEMSTQMAKLFA------AAGQSVPEVKYIFELNPDHVLVK----RTADTKDEAQFKEWVELLLDQALFAERGTLEDPNQFIRRM 618          
BLAST of CK933992 vs. ExPASy Swiss-Prot
Match: HTPG_FRATH (Chaperone protein htpG OS=Francisella tularensis subsp. holarctica (strain LVS) GN=htpG PE=3 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 2.449e-14
Identity = 52/185 (28.11%), Postives = 100/185 (54.05%), Query Frame = 2
Query:    2 GYEVIFFTDPVDEYLMQYLMDYEDKKFQNVSKEGLKLGK----DTKDKELKES--FKELTKWWKGALASENVDDVKVSNRLDNTPCVVVTSKYGWSANMERIMQSQTLSDASKQAYMRG---KRVLEINPRHPIIKELRERVVKDPEDAGVQQTAQLIYQTALMESGFSLNDPKDFASRIYSTVK 529
            G EVI  TD +DE++M  L +++DK  +++ K  + L K    + K+K  KE+  F+++ K  K  L  + V+DV++S RL ++P  VV + YG S +M+++M+       + Q++M G   K +LE+N  H ++++L+     + +       ++L+   A+   G  + DP  F   +   ++
Sbjct:  455 GIEVILMTDRIDEWMMSTLTEFDDKHMKSIIKGDIDLDKFETPENKEKFEKEAKDFEKVLKEIKEVL-KDKVEDVRLSKRLTDSPSCVVVNDYGMSLHMQKMMEE------AGQSFMPGMGMKPILELNAEHNLVQKLK----NEADTEIFADLSELLLLQAMFVEGAKIEDPMAFVKLVNKYIR 628          
BLAST of CK933992 vs. ExPASy Swiss-Prot
Match: HTPG_FRATF (Chaperone protein htpG OS=Francisella tularensis subsp. holarctica (strain FTNF002-00 / FTA) GN=htpG PE=3 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 2.449e-14
Identity = 52/185 (28.11%), Postives = 100/185 (54.05%), Query Frame = 2
Query:    2 GYEVIFFTDPVDEYLMQYLMDYEDKKFQNVSKEGLKLGK----DTKDKELKES--FKELTKWWKGALASENVDDVKVSNRLDNTPCVVVTSKYGWSANMERIMQSQTLSDASKQAYMRG---KRVLEINPRHPIIKELRERVVKDPEDAGVQQTAQLIYQTALMESGFSLNDPKDFASRIYSTVK 529
            G EVI  TD +DE++M  L +++DK  +++ K  + L K    + K+K  KE+  F+++ K  K  L  + V+DV++S RL ++P  VV + YG S +M+++M+       + Q++M G   K +LE+N  H ++++L+     + +       ++L+   A+   G  + DP  F   +   ++
Sbjct:  455 GIEVILMTDRIDEWMMSTLTEFDDKHMKSIIKGDIDLDKFETPENKEKFEKEAKDFEKVLKEIKEVL-KDKVEDVRLSKRLTDSPSCVVVNDYGMSLHMQKMMEE------AGQSFMPGMGMKPILELNAEHNLVQKLK----NEADTEIFADLSELLLLQAMFVEGAKIEDPMAFVKLVNKYIR 628          
BLAST of CK933992 vs. ExPASy Swiss-Prot
Match: HTPG_RHOFD (Chaperone protein htpG OS=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) GN=htpG PE=3 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 3.199e-14
Identity = 55/177 (31.07%), Postives = 89/177 (50.28%), Query Frame = 2
Query:    2 GYEVIFFTDPVDEYLMQYLMDYEDKKFQNVSKEGLKLGK--DTKDK----ELKESFKELTKWWKGALASENVDDVKVSNRLDNTPCVVVTSKYGWSANMERIMQSQTLSDASKQAYMRGKRVLEINPRHPIIKELRERVVKDPEDAGVQQTAQLIYQTALMESGFSLNDPKDFASRI 514
            G EV+  TD VDE+ + YL +++    Q+V+K  + LGK  D  +K    E  E+FK L    K AL  +  +DV+V+ RL ++P  +V   +G S  + R+++       + QA    K VLE+N  HP++K+L   V            A +++  AL+  G    DP  +  R+
Sbjct:  496 GIEVLLMTDRVDEWALNYLQEFDGTPLQSVAKGAVDLGKLQDEAEKKAAEEAAETFKPLLAKLKEAL-KDKAEDVRVTTRLVDSPACLVVQDHGMSTQLARMLKQ------AGQAAPDVKPVLEVNAEHPLVKKLDGSV-------HFNDLAHILFDQALLAEGGLPADPAAYVKRV 658          
BLAST of CK933992 vs. ExPASy Swiss-Prot
Match: HTPG_CHRSD (Chaperone protein htpG OS=Chromohalobacter salexigens (strain DSM 3043 / ATCC BAA-138 / NCIMB 13768) GN=htpG PE=3 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 3.199e-14
Identity = 54/178 (30.34%), Postives = 92/178 (51.69%), Query Frame = 2
Query:    2 GYEVIFFTDPVDEYLMQYLMDYEDKKFQNVSKEGLKLGKDTKDKELKESFKELTKWW-------KGALASENVDDVKVSNRLDNTPCVVVTSKYGWSANMERIMQSQTLSDASKQAYMRGKRVLEINPRHPIIKELRERVVKDPEDAGVQQTAQLIYQTALMESGFSLNDPKDFASRI 514
            G EV+   D +DE+LM +L +Y+ K F +V+K  L L  D  D+E K++ +E  K         K AL  E V +V++++RL ++P  VV S++     M R+M+      A+ Q     K +LE+NP H ++  L     +  +D+     A+++   A++  G  L DP  +  R+
Sbjct:  462 GIEVLLLHDRIDEWLMSHLTEYDGKAFADVAKGDLDLD-DMADEEEKKAQEETAKAKAPLIERVKTALGDE-VQEVRITHRLTDSPACVVLSEHDMGYQMRRLME------AAGQPLPEVKPILELNPEHSLVARL-----EGADDSVFNDLARILLDQAIIAEGGHLEDPATYVQRL 626          
The following BLAST results are available for this feature:
BLAST of CK933992 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 315
Match NameE-valueIdentityDescription
HTPG_SALTY1.875e-1429.14Chaperone protein htpG OS=Salmonella typhimurium G... [more]
HTPG_PSYCK1.875e-1432.77Chaperone protein htpG OS=Psychrobacter cryohalole... [more]
HTPG_BUCBP1.875e-1427.01Chaperone protein htpG OS=Buchnera aphidicola subs... [more]
HTPG_AERHH1.875e-1431.07Chaperone protein htpG OS=Aeromonas hydrophila sub... [more]
HTPG_YERE82.449e-1430.29Chaperone protein htpG OS=Yersinia enterocolitica ... [more]
HTPG_SALCH2.449e-1429.14Chaperone protein htpG OS=Salmonella choleraesuis ... [more]
HTPG_FRATH2.449e-1428.11Chaperone protein htpG OS=Francisella tularensis s... [more]
HTPG_FRATF2.449e-1428.11Chaperone protein htpG OS=Francisella tularensis s... [more]
HTPG_RHOFD3.199e-1431.07Chaperone protein htpG OS=Rhodoferax ferrireducens... [more]
HTPG_CHRSD3.199e-1430.34Chaperone protein htpG OS=Chromohalobacter salexig... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004542_G03 Developing fruit peel at 38 DAFB Citrus sinensis cDNA clone P38DAB10001_IVF_G03 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK933992 ID=CK933992; Name=CK933992; organism=Citrus sinensis; type=EST; length=894bp
GGGCTATGAGGTGATTTTCTTCACTGATCCAGTTGATGAATACCTGATGC
AATACCTGATGGATTATGAAGACAAAAAGTTCCAAAATGTATCTAAAGAG
GGTCTTAAACTTGGTAAAGACACTAAAGATAAGGAACTTAAGGAGTCATT
CAAGGAGCTCACGAAATGGTGGAAGGGTGCTCTTGCCAGCGAGAACGTGG
ATGATGTGAAAGTAAGCAACCGCTTGGATAACACCCCTTGCGTAGTTGTG
ACATCAAAGTATGGTTGGAGTGCGAATATGGAGAGGATCATGCAGTCTCA
GACTCTCTCAGATGCTAGCAAGCAAGCATATATGCGGGGCAAGAGGGTGC
TTGAAATCAATCCAAGGCATCCAATCATCAAAGAGCTCCGGGAGAGAGTC
GTCAAGGACCCTGAGGATGCGGGTGTCCAGCAAACAGCCCAACTCATTTA
CCAGACGGCACTCATGGAGAGTGGCTTTTCGCTCAATGATCCCAAGGATT
TTGCCTCCCGAATTTACAGCACGGTGAAATCTAGCCTTAACATTAGCCCT
GATGCAGCTGTTGAGGAGGAAGATGATGTAGAAGAGACTGATGCTGACAC
TGAAATGAAAGAATCTTCGGCTGCCAAAGAGGACGTGGATACAGAGTATT
CTGGCAAGGATGAGTTGTAGATTGCCTAATAAAAGCATGGGCAACAACAT
CCCAGTTTCTTAGGAAAGCATAAACGCTCTGCATAGTGCGTTCATTTCCA
GTTTTGAAAACTTTGGTGAAAAAACGTTTTAGATCTTAGATTCAATGTAA
CCATAATCACCGGGAATTTTGTCTTTTAACAGTTGACACTATCAATTATG
GATGAATCAGCGTGTCAAAAAAAAAAAAAAAAAAAAAAAAAAAA
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