CK933992

Overview
NameCK933992
Unique NameCK933992
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length894
Libraries
Library NameType
Developing fruit peel at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK933992 vs. ExPASy Swiss-Prot
Match: HTPG_ACISJ (Chaperone protein htpG OS=Acidovorax sp. (strain JS42) GN=htpG PE=3 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 3.199e-14
Identity = 54/177 (30.51%), Postives = 88/177 (49.72%), Query Frame = 2
Query:    2 GYEVIFFTDPVDEYLMQYLMDYEDKKFQNVSKEGLKLGK--DTKDK----ELKESFKELTKWWKGALASENVDDVKVSNRLDNTPCVVVTSKYGWSANMERIMQSQTLSDASKQAYMRGKRVLEINPRHPIIKELRERVVKDPEDAGVQQTAQLIYQTALMESGFSLNDPKDFASRI 514
            G EV+  TD VDE+ + YL D++    Q+V+K  + LGK  D  +K    E  E+FK +    K AL  +  +DV+V+ RL ++P  +V    G S  + R+++       + Q+    K VLE+NP H ++K+L   V            A +++  AL+  G    DP  +  R+
Sbjct:  483 GIEVLLMTDRVDEWALNYLQDFDGTPLQSVAKGAVDLGKLQDEAEKKAAEEAAEAFKPMLAKLKEAL-KDKAEDVRVTTRLVDSPACLVVQDGGMSTQLARLLKQ------AGQSAPDAKPVLEVNPEHALVKKLDGSV-------HFHDLAHILFDQALLAEGGLPEDPAAYVKRV 645          
BLAST of CK933992 vs. ExPASy Swiss-Prot
Match: HTPG_PSYA2 (Chaperone protein htpG OS=Psychrobacter arcticus (strain DSM 17307 / 273-4) GN=htpG PE=3 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 4.178e-14
Identity = 57/177 (32.20%), Postives = 90/177 (50.85%), Query Frame = 2
Query:    2 GYEVIFFTDPVDEYLMQYLMDYEDKKFQNVSKEGLKLG--KDTKDK----ELKESFKELTKWWKGALASENVDDVKVSNRLDNTPCVVVTSKYGWSANMERIMQSQTLSDASKQAYMRGKRVLEINPRHPIIKELRERVVKDPEDAGVQQTAQLIYQTALMESGFSLNDPKDFASRI 514
            G EVI  T  VDE+ M +L  +++   QN++K  + LG  +D  +K    + +E+ K +    K AL  +   DVKVS RL ++P  +V  +   S  M ++++         Q     K  LE+NP HP+IK+L E   +  ED    + AQ+I+  AL+  G  L DP  +  R+
Sbjct:  484 GIEVILMTSRVDEWAMNFLTSFDETPLQNIAKGAVDLGDLQDEAEKAEAEKAQETMKPVVDKLKAAL-GDRAKDVKVSTRLVDSPACLVVGEGELSPQMIQMLKQM------GQDVPESKPTLEVNPDHPLIKKL-ESSEQSAED--FDKLAQVIFDQALLADGGQLEDPAAYLRRV 650          
BLAST of CK933992 vs. ExPASy Swiss-Prot
Match: HTPG_SALTI (Chaperone protein htpG OS=Salmonella typhi GN=htpG PE=3 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 5.457e-14
Identity = 50/175 (28.57%), Postives = 90/175 (51.43%), Query Frame = 2
Query:    2 GYEVIFFTDPVDEYLMQYLMDYEDKKFQNVSK--EGLKLGKDTKDKELKESFKELTKWWK--GALASENVDDVKVSNRLDNTPCVVVTSKYGWSANMERIMQSQTLSDASKQAYMRGKRVLEINPRHPIIKELRERVVKDPEDAGVQQTAQLIYQTALMESGFSLNDPKDFASRI 514
            G EV+  +D +DE++M YL +++ K FQ+V+K  E ++   D  D+  KE+ K L  + +    L  + V +V++++RL +TP +V T     S  M ++        A+ Q+    K + E+NP H ++K    R     ++A  ++  +L+   AL     +L DP  F  R+
Sbjct:  454 GIEVLLLSDRIDEWMMNYLTEFDGKAFQSVAKADESIEKLADEVDENAKEAEKALEPFVERVKTLLGDRVKEVRLTHRLTDTPAIVTTDADEMSTQMAKLFA------AAGQSVPEVKYIFELNPDHVLVK----RTADTKDEAQFKEWVELLLDQALFAERGTLEDPNQFIRRM 618          
BLAST of CK933992 vs. ExPASy Swiss-Prot
Match: HTPG_SALPB (Chaperone protein htpG OS=Salmonella paratyphi B (strain ATCC BAA-1250 / SPB7) GN=htpG PE=3 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 5.457e-14
Identity = 50/175 (28.57%), Postives = 90/175 (51.43%), Query Frame = 2
Query:    2 GYEVIFFTDPVDEYLMQYLMDYEDKKFQNVSK--EGLKLGKDTKDKELKESFKELTKWWK--GALASENVDDVKVSNRLDNTPCVVVTSKYGWSANMERIMQSQTLSDASKQAYMRGKRVLEINPRHPIIKELRERVVKDPEDAGVQQTAQLIYQTALMESGFSLNDPKDFASRI 514
            G EV+  +D +DE++M YL +++ K FQ+V+K  E ++   D  D+  KE+ K L  + +    L  + V +V++++RL +TP +V T     S  M ++        A+ Q+    K + E+NP H ++K    R     ++A  ++  +L+   AL     +L DP  F  R+
Sbjct:  454 GIEVLLLSDRIDEWMMNYLTEFDGKAFQSVAKADESIEKLADEVDENAKEAEKALEPFVERVKTLLGDRVKEVRLTHRLTDTPAIVTTDADEMSTQMAKLFA------AAGQSVPEVKYIFELNPDHVLVK----RTADTEDEAQFKEWVELLLDQALFAERGTLEDPNQFIRRM 618          
BLAST of CK933992 vs. ExPASy Swiss-Prot
Match: HTPG_SALPA (Chaperone protein htpG OS=Salmonella paratyphi A GN=htpG PE=3 SV=2)

HSP 1 Score: 78.5666 bits (192), Expect = 5.457e-14
Identity = 50/175 (28.57%), Postives = 90/175 (51.43%), Query Frame = 2
Query:    2 GYEVIFFTDPVDEYLMQYLMDYEDKKFQNVSK--EGLKLGKDTKDKELKESFKELTKWWK--GALASENVDDVKVSNRLDNTPCVVVTSKYGWSANMERIMQSQTLSDASKQAYMRGKRVLEINPRHPIIKELRERVVKDPEDAGVQQTAQLIYQTALMESGFSLNDPKDFASRI 514
            G EV+  +D +DE++M YL +++ K FQ+V+K  E ++   D  D+  KE+ K L  + +    L  + V +V++++RL +TP +V T     S  M ++        A+ Q+    K + E+NP H ++K    R     ++A  ++  +L+   AL     +L DP  F  R+
Sbjct:  454 GIEVLLLSDRIDEWMMNYLTEFDGKAFQSVAKADESIEKLADEVDENAKEAEKALEPFVERVKTLLGDRVKEVRLTHRLTDTPAIVTTDADEMSTQMAKLFA------AAGQSVPEVKYIFELNPDHVLVK----RTADTEDEAQFKEWVELLLDQALFAERGTLEDPNQFIRRM 618          
BLAST of CK933992 vs. ExPASy Swiss-Prot
Match: HTPG_PROVI (Chaperone protein htpG OS=Prosthecochloris vibrioformis (strain DSM 265) (strain DSM 265) GN=htpG PE=3 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 5.457e-14
Identity = 48/181 (26.52%), Postives = 95/181 (52.49%), Query Frame = 2
Query:    2 GYEVIFFTDPVDEYLMQYLMDYEDKKFQNVSKEGLKLGKDTKDKE---LKESFKELTKWWKGALASENVDDVKVSNRLDNTPCVVVTSKYGWSANMERIMQSQTLSDASKQAYMRGKRVLEINPRHPIIKELRERVVKDPEDAGVQQTAQLIYQTALMESGFSLNDPKDFASRIYSTVKSS 535
            G EV+  +DPVD +++  + +Y+ K+ +++ K  +   K+  + E    +     L   ++ AL  E++ DV  S+RL ++P  +V  K    + MER+M+        +Q     K+VLE+NPRHPII+ L   ++ + ++  +    + +Y+ AL+  G  L+    F  R+   ++++
Sbjct:  449 GIEVLLLSDPVDVFVIPSIHEYDSKQLKSIEKADIDFSKEKTEGEEPVAENLLVPLLAKFREALG-EDIADVVESHRLVSSPVTIVGGKDAMDSQMERMMKMM------QQEMPAAKKVLEVNPRHPIIRNLSGMMIANADNPLINSAIRQLYEGALLLEG-DLSSTTGFVQRMNELIEAA 621          
BLAST of CK933992 vs. ExPASy Swiss-Prot
Match: HTPG_BURPS (Chaperone protein htpG OS=Burkholderia pseudomallei GN=htpG PE=3 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 5.457e-14
Identity = 55/175 (31.43%), Postives = 88/175 (50.29%), Query Frame = 2
Query:    2 GYEVIFFTDPVDEYLMQYLMDYEDKKFQNVSKEGLKLGKDTKDK-----ELKESFKELTKWWKGALASENVDDVKVSNRLDNTPCVVVTSKYGWSANMERIMQSQTLSDASKQAYMRGKRVLEINPRHPIIKELRERVVKDPEDAGVQQTAQLIYQTALMESGFSLNDPKDFASR 511
            G EV+  TD VDE+++ +L +++ K   +V++  L LG    D+     E  E+ K +    K  L  E V DV+V+ RL ++P  +V      S  ++R++++   S  S Q       +LEINP HP++K L+     D  D G      L++  AL+  G +L DP  F  R
Sbjct:  461 GVEVLLLTDRVDEWMLSFLHEFDGKPLASVARGDLDLGALNDDEKKAQEETGEAMKPVVDKMKETLG-EKVKDVRVTFRLTDSPSCLVADDNDMSGYLQRMLKAAGQSAPSFQP------ILEINPEHPLVKALK----ADGADFG--DWCHLLFDQALLAEGGALEDPASFVKR 622          
BLAST of CK933992 vs. ExPASy Swiss-Prot
Match: HTPG_BURP6 (Chaperone protein htpG OS=Burkholderia pseudomallei (strain 668) GN=htpG PE=3 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 5.457e-14
Identity = 55/175 (31.43%), Postives = 88/175 (50.29%), Query Frame = 2
Query:    2 GYEVIFFTDPVDEYLMQYLMDYEDKKFQNVSKEGLKLGKDTKDK-----ELKESFKELTKWWKGALASENVDDVKVSNRLDNTPCVVVTSKYGWSANMERIMQSQTLSDASKQAYMRGKRVLEINPRHPIIKELRERVVKDPEDAGVQQTAQLIYQTALMESGFSLNDPKDFASR 511
            G EV+  TD VDE+++ +L +++ K   +V++  L LG    D+     E  E+ K +    K  L  E V DV+V+ RL ++P  +V      S  ++R++++   S  S Q       +LEINP HP++K L+     D  D G      L++  AL+  G +L DP  F  R
Sbjct:  461 GVEVLLLTDRVDEWMLSFLHEFDGKPLASVARGDLDLGALNDDEKKAQEETGEAMKPVVDKMKETLG-EKVKDVRVTFRLTDSPSCLVADDNDMSGYLQRMLKAAGQSAPSFQP------ILEINPEHPLVKALK----ADGADFG--DWCHLLFDQALLAEGGALEDPASFVKR 622          
BLAST of CK933992 vs. ExPASy Swiss-Prot
Match: HTPG_BURP1 (Chaperone protein htpG OS=Burkholderia pseudomallei (strain 1710b) GN=htpG PE=3 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 5.457e-14
Identity = 55/175 (31.43%), Postives = 88/175 (50.29%), Query Frame = 2
Query:    2 GYEVIFFTDPVDEYLMQYLMDYEDKKFQNVSKEGLKLGKDTKDK-----ELKESFKELTKWWKGALASENVDDVKVSNRLDNTPCVVVTSKYGWSANMERIMQSQTLSDASKQAYMRGKRVLEINPRHPIIKELRERVVKDPEDAGVQQTAQLIYQTALMESGFSLNDPKDFASR 511
            G EV+  TD VDE+++ +L +++ K   +V++  L LG    D+     E  E+ K +    K  L  E V DV+V+ RL ++P  +V      S  ++R++++   S  S Q       +LEINP HP++K L+     D  D G      L++  AL+  G +L DP  F  R
Sbjct:  461 GVEVLLLTDRVDEWMLSFLHEFDGKPLASVARGDLDLGALNDDEKKAQEETGEAMKPVVDKMKETLG-EKVKDVRVTFRLTDSPSCLVADDNDMSGYLQRMLKAAGQSAPSFQP------ILEINPEHPLVKALK----ADGADFG--DWCHLLFDQALLAEGGALEDPASFVKR 622          
BLAST of CK933992 vs. ExPASy Swiss-Prot
Match: HTPG_BURP0 (Chaperone protein htpG OS=Burkholderia pseudomallei (strain 1106a) GN=htpG PE=3 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 5.457e-14
Identity = 55/175 (31.43%), Postives = 88/175 (50.29%), Query Frame = 2
Query:    2 GYEVIFFTDPVDEYLMQYLMDYEDKKFQNVSKEGLKLGKDTKDK-----ELKESFKELTKWWKGALASENVDDVKVSNRLDNTPCVVVTSKYGWSANMERIMQSQTLSDASKQAYMRGKRVLEINPRHPIIKELRERVVKDPEDAGVQQTAQLIYQTALMESGFSLNDPKDFASR 511
            G EV+  TD VDE+++ +L +++ K   +V++  L LG    D+     E  E+ K +    K  L  E V DV+V+ RL ++P  +V      S  ++R++++   S  S Q       +LEINP HP++K L+     D  D G      L++  AL+  G +L DP  F  R
Sbjct:  461 GVEVLLLTDRVDEWMLSFLHEFDGKPLASVARGDLDLGALNDDEKKAQEETGEAMKPVVDKMKETLG-EKVKDVRVTFRLTDSPSCLVADDNDMSGYLQRMLKAAGQSAPSFQP------ILEINPEHPLVKALK----ADGADFG--DWCHLLFDQALLAEGGALEDPASFVKR 622          
The following BLAST results are available for this feature:
BLAST of CK933992 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 315
Match NameE-valueIdentityDescription
HTPG_ACISJ3.199e-1430.51Chaperone protein htpG OS=Acidovorax sp. (strain J... [more]
HTPG_PSYA24.178e-1432.20Chaperone protein htpG OS=Psychrobacter arcticus (... [more]
HTPG_SALTI5.457e-1428.57Chaperone protein htpG OS=Salmonella typhi GN=htpG... [more]
HTPG_SALPB5.457e-1428.57Chaperone protein htpG OS=Salmonella paratyphi B (... [more]
HTPG_SALPA5.457e-1428.57Chaperone protein htpG OS=Salmonella paratyphi A G... [more]
HTPG_PROVI5.457e-1426.52Chaperone protein htpG OS=Prosthecochloris vibriof... [more]
HTPG_BURPS5.457e-1431.43Chaperone protein htpG OS=Burkholderia pseudomalle... [more]
HTPG_BURP65.457e-1431.43Chaperone protein htpG OS=Burkholderia pseudomalle... [more]
HTPG_BURP15.457e-1431.43Chaperone protein htpG OS=Burkholderia pseudomalle... [more]
HTPG_BURP05.457e-1431.43Chaperone protein htpG OS=Burkholderia pseudomalle... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004542_G03 Developing fruit peel at 38 DAFB Citrus sinensis cDNA clone P38DAB10001_IVF_G03 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK933992 ID=CK933992; Name=CK933992; organism=Citrus sinensis; type=EST; length=894bp
GGGCTATGAGGTGATTTTCTTCACTGATCCAGTTGATGAATACCTGATGC
AATACCTGATGGATTATGAAGACAAAAAGTTCCAAAATGTATCTAAAGAG
GGTCTTAAACTTGGTAAAGACACTAAAGATAAGGAACTTAAGGAGTCATT
CAAGGAGCTCACGAAATGGTGGAAGGGTGCTCTTGCCAGCGAGAACGTGG
ATGATGTGAAAGTAAGCAACCGCTTGGATAACACCCCTTGCGTAGTTGTG
ACATCAAAGTATGGTTGGAGTGCGAATATGGAGAGGATCATGCAGTCTCA
GACTCTCTCAGATGCTAGCAAGCAAGCATATATGCGGGGCAAGAGGGTGC
TTGAAATCAATCCAAGGCATCCAATCATCAAAGAGCTCCGGGAGAGAGTC
GTCAAGGACCCTGAGGATGCGGGTGTCCAGCAAACAGCCCAACTCATTTA
CCAGACGGCACTCATGGAGAGTGGCTTTTCGCTCAATGATCCCAAGGATT
TTGCCTCCCGAATTTACAGCACGGTGAAATCTAGCCTTAACATTAGCCCT
GATGCAGCTGTTGAGGAGGAAGATGATGTAGAAGAGACTGATGCTGACAC
TGAAATGAAAGAATCTTCGGCTGCCAAAGAGGACGTGGATACAGAGTATT
CTGGCAAGGATGAGTTGTAGATTGCCTAATAAAAGCATGGGCAACAACAT
CCCAGTTTCTTAGGAAAGCATAAACGCTCTGCATAGTGCGTTCATTTCCA
GTTTTGAAAACTTTGGTGAAAAAACGTTTTAGATCTTAGATTCAATGTAA
CCATAATCACCGGGAATTTTGTCTTTTAACAGTTGACACTATCAATTATG
GATGAATCAGCGTGTCAAAAAAAAAAAAAAAAAAAAAAAAAAAA
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