CK933992

Overview
NameCK933992
Unique NameCK933992
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length894
Libraries
Library NameType
Developing fruit peel at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK933992 vs. ExPASy Swiss-Prot
Match: HTPG_FRAT1 (Chaperone protein htpG OS=Francisella tularensis subsp. tularensis (strain FSC 198) GN=htpG PE=3 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 3.537e-13
Identity = 50/185 (27.03%), Postives = 99/185 (53.51%), Query Frame = 2
Query:    2 GYEVIFFTDPVDEYLMQYLMDYEDKKFQNVSKEGLKLGK----DTKDKELKES--FKELTKWWKGALASENVDDVKVSNRLDNTPCVVVTSKYGWSANMERIMQSQTLSDASKQAYMRG---KRVLEINPRHPIIKELRERVVKDPEDAGVQQTAQLIYQTALMESGFSLNDPKDFASRIYSTVK 529
            G EVI  TD +DE++M  L +++ K  +++ K  + L +    + K+K  KE+  F+++ K  K  L  + V+DV++S RL ++P  VV + YG S +M+++M+       + Q++M G   K +LE+N  H ++++L+     + +       ++L+   A+   G  + DP  F   +   ++
Sbjct:  455 GIEVILMTDRIDEWMMSTLTEFDGKHMKSIIKGDIDLDRFETPENKEKFEKEAKDFEKVLKEIKEVL-KDKVEDVRLSKRLTDSPSCVVVNDYGMSLHMQKMMEE------AGQSFMPGMGMKPILELNAEHNLVQKLK----NEADTEIFADLSELLLLQAMFVEGAKIEDPMAFVKLVNKYIR 628          
BLAST of CK933992 vs. ExPASy Swiss-Prot
Match: HTPG_BURTA (Chaperone protein htpG OS=Burkholderia thailandensis (strain E264 / ATCC 700388 / DSM 13276 / CIP 106301) GN=htpG PE=3 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 3.537e-13
Identity = 53/175 (30.29%), Postives = 88/175 (50.29%), Query Frame = 2
Query:    2 GYEVIFFTDPVDEYLMQYLMDYEDKKFQNVSKEGLKLGKDTKDK-----ELKESFKELTKWWKGALASENVDDVKVSNRLDNTPCVVVTSKYGWSANMERIMQSQTLSDASKQAYMRGKRVLEINPRHPIIKELRERVVKDPEDAGVQQTAQLIYQTALMESGFSLNDPKDFASR 511
            G EV+  TD VDE+++ +L +++ K   +V++  L LG    D+     E  E+ K +    K  L  + V DV+V+ RL ++P  +V      S  ++R++++   +  S Q       +LEINP HP++K L+     D  D G      L++  AL+  G +L DP  F  R
Sbjct:  461 GVEVLLLTDRVDEWMLSFLHEFDGKPLASVARGDLDLGALNDDEKKAQEETGEAMKPVVDKMKETLGGK-VKDVRVTFRLTDSPSCLVADDNDMSGYLQRMLKAAGQNAPSFQP------ILEINPEHPLVKALK----ADGADFG--DWCHLLFDQALLAEGGALEDPASFVKR 622          
BLAST of CK933992 vs. ExPASy Swiss-Prot
Match: HTPG_ANAMM (Chaperone protein htpG OS=Anaplasma marginale (strain St. Maries) GN=htpG PE=3 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 3.537e-13
Identity = 49/189 (25.93%), Postives = 90/189 (47.62%), Query Frame = 2
Query:    2 GYEVIFFTDPVDEYLMQYLMDYEDKKFQNVSK----------EG--------LKLGKDTKDKELKESFKELTKWWKGALASENVDDVKVSNRLDNTPCVVVTSKYGWSANMERIMQSQTLSDASKQAYMRGKRVLEINPRHPIIKELRERVVKDPEDAGVQQTAQLIYQTALMESGFSLNDPKDFASRI 514
            G EV+   DPVD++    +++Y+   F++V++          EG         K  KDT D + KE+ +    + K  L  ++V D+KVS +L  +   +   ++     MER ++ Q      KQ   +G R+LE+N +HP++  L      + E   ++    +++  A +  G  +N   DFA+R+
Sbjct:  447 GIEVVLLVDPVDDFWTSVVLEYKGVPFKSVTRVDESDLEKFTEGDDQQSTKKKKEKKDTDDAQQKENVEAFIDYMKKVLG-DSVSDIKVSRKLTTSLVCLAVPEHALDIRMERFLREQ------KQLSYKGSRILELNIKHPVLSGLLREYKDNGESELLENMVHVLFDQACIIEGEEVNSAVDFANRM 628          
BLAST of CK933992 vs. ExPASy Swiss-Prot
Match: HTPG_RALEJ (Chaperone protein htpG OS=Ralstonia eutropha (strain JMP134) GN=htpG PE=3 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 4.619e-13
Identity = 47/176 (26.70%), Postives = 89/176 (50.57%), Query Frame = 2
Query:    2 GYEVIFFTDPVDEYLMQYLMDYEDKKFQNVSKEGLKLGKDTKDKELKESFKELTKWWKGALASENV-----DDVKVSNRLDNTPCVVVTSKYGWSANMERIMQSQTLSDASKQAYMRGKRVLEINPRHPIIKELRERVVKDPEDAGVQQTAQLIYQTALMESGFSLNDPKDFASRI 514
            G EV+  TD VDE+++ +L +++ K+  +V++  L LG    + E  E  K  T+W      ++ V      DV+V+ RL  +   +V+ +   S  ++R+++       + Q     + +LE+NP H ++K+LR+     PE  G      +++  AL+  G  L+DP  +  R+
Sbjct:  463 GIEVLLLTDRVDEWMLSFLREFDGKELVSVARGDLDLGSLADEAEKAEQEKAETEWKDVVARAKTVLEGKAKDVRVTLRLTASASCLVSDEGDMSGYLQRLLKQ------AGQKAPDAQPILELNPEHALVKKLRDL----PEGDGFNDRLLVLFDQALLAEGGMLDDPAAYVQRV 628          
BLAST of CK933992 vs. ExPASy Swiss-Prot
Match: HTPG_HAES1 (Chaperone protein htpG OS=Haemophilus somnus (strain 129Pt) GN=htpG PE=3 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 4.619e-13
Identity = 57/177 (32.20%), Postives = 87/177 (49.15%), Query Frame = 2
Query:    8 EVIFFTDPVDEYLMQYLMDYEDKKFQNVSKEGLKLGKDTKDKELKESFKELTKWWKG------ALASENVDDVKVSNRLDNTPCVVVTSKYGWSANMERIMQSQTLSDASKQAYMRGKRVLEINPRHPIIKELRERVVKDPEDAGVQQTAQLIYQTALMESGFSLNDPKDFASRIYS 520
            EV+  +D +DE+++ YL +++ K+ Q ++K  L LG D  DKE +E  KE  K +         L  E V DV++++RL +TP VV T       N +   Q   L  A+ Q     K   E+NP H ++K++ +      ED        L+ Q  L E G SL +P  F  R+ S
Sbjct:  459 EVLLLSDRIDEWMLSYLTEFDGKQLQPITKADLDLG-DLADKEQEEQ-KEQDKTFSSFIERVKTLLGERVKDVRLTHRLTDTPAVVSTD------NDQMTTQMAKLFAAAGQPVPEVKYTFELNPEHHLVKKVADLA---DEDEFANWIELLLEQAMLAERG-SLENPTAFIKRVNS 623          
BLAST of CK933992 vs. ExPASy Swiss-Prot
Match: HTPG_DESPS (Chaperone protein htpG OS=Desulfotalea psychrophila GN=htpG PE=3 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 4.619e-13
Identity = 55/189 (29.10%), Postives = 97/189 (51.32%), Query Frame = 2
Query:    8 EVIFFTDPVDEYLMQYLMDYEDKKFQNVSKEGLKLGKDTKDKEL-------KESFKELTKWWKGALASENVDDVKVSNRLDNTPCVVVTSKYGWSANMERIMQSQTLSDASKQAYMRG----KRVLEINPRHPIIKELRERVVKDPEDAGVQQTAQLIYQTALMESGFSLNDPKDFASRIYSTVKSSLN 541
            E+++  DP+D++++ +L ++E KK  +     + L K+  +  L       K    EL  W K  L  E V DV  S+RL + P ++V +    SA+MER+     L+ + K+  + G    K+ LEIN ++P+IK+L E    D   AG  + A  I   A++++G  + DP    +R Y  +  +++
Sbjct:  441 EIVYTLDPIDDFVLSHLQEFEGKKLVSADGADISLDKEEAEDALVDESGVDKAELAELLTWMKEELKDE-VGDVLSSHRLVDAPAMIVNADGFMSASMERV-----LAASRKEQGIAGVDGSKKHLEINGKNPLIKQLAELRKADAGFAG--EVAHQILDNAMIQAGLVV-DPLKMVARNYKILDRAVS 620          
BLAST of CK933992 vs. ExPASy Swiss-Prot
Match: HTPG_BURS3 (Chaperone protein htpG OS=Burkholderia sp. (strain 383) GN=htpG PE=3 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 4.619e-13
Identity = 52/176 (29.55%), Postives = 92/176 (52.27%), Query Frame = 2
Query:    2 GYEVIFFTDPVDEYLMQYLMDYEDKKFQNVSKEGLKLGKDTKDKELK------ESFKELTKWWKGALASENVDDVKVSNRLDNTPCVVVTSKYGWSANMERIMQSQTLSDASKQAYMRGKRVLEINPRHPIIKELRERVVKDPEDAGVQQTAQLIYQTALMESGFSLNDPKDFASR 511
            G EV+  TD VDE+++ +L +++ K   +V++  L LG +  D+E K      E+ K + +  K AL  + V +V+V+ RL ++P  +V      S  ++R++++   +  + Q       +LEINP H ++K+L+     D  D G      L++  AL+  G  L+DP  F  R
Sbjct:  461 GVEVLLLTDRVDEWMLSFLQEFDGKPLASVARGDLDLG-ELNDEEKKAQEEAGEAIKPVVEKMKEALG-DKVKEVRVTFRLTDSPSCLVADDNDMSGYLQRMLKAAGQNAPAMQP------ILEINPEHALVKQLK----ADSADFG--DWCHLLFDQALLAEGGMLDDPASFVKR 622          
BLAST of CK933992 vs. ExPASy Swiss-Prot
Match: HTPG_EXIS2 (Chaperone protein htpG OS=Exiguobacterium sibiricum (strain DSM 17290 / JCM 13490 / 255-15) GN=htpG PE=3 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 7.880e-13
Identity = 46/171 (26.90%), Postives = 91/171 (53.22%), Query Frame = 2
Query:    2 GYEVIFFTDPVDEYLMQYLMDYEDKKFQNVSKEGLKLGKDTKDKELKESFKELTKWWKGALASENVDDVKVSNRLDNTPCVVVTSKYGWSANMERIMQSQTLSDASKQAYMRGKRVLEINPRHPIIKELRERVVKDPEDAGVQQTAQLIYQTALMESGFSLNDPKDFASRI 514
            G+++++FT+ +DE+ +Q L++Y+ K+F++V+   L + + T+  E  E+  E+ K  +  LA  +V +VK S RL + P    T     S  ME+I+++           +   ++LE+N  H + + +     +D      ++  +L+YQ AL+  G  + DP  FA+ +
Sbjct:  456 GFDILYFTEEIDEFAIQMLLNYDGKEFKSVTSSDLGI-EQTEQAETTETQAEMFKAMQEVLAG-HVKEVKASTRLKSHPVCFATDG-AVSIEMEKILKAM-----PNNQDVAAVKILELNTSHDVFRAIETAYAEDRPK--FERYTKLMYQQALLMEGLPIEDPVAFANEV 616          
BLAST of CK933992 vs. ExPASy Swiss-Prot
Match: HTPG_AGGAC (Chaperone protein htpG OS=Aggregatibacter actinomycetemcomitans GN=htpG PE=3 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 7.880e-13
Identity = 54/180 (30.00%), Postives = 88/180 (48.89%), Query Frame = 2
Query:    2 GYEVIFFTDPVDEYLMQYLMDYEDKKFQNVSKEGLKLGKDTKDKELKE---------SFKELTKWWKGALASENVDDVKVSNRLDNTPCVVVTSKYGWSANMERIMQSQTLSDASKQAYMRGKRVLEINPRHPIIKELRERVVKDPEDAGVQQTAQLIYQTALMESGFSLNDPKDFASRI 514
            G EV+  +D +DE+++ YL +++ K  Q+++K  L LG D  DKE +E         SF E  K     L    V +V++++RL +TP VV T       N +   Q   L  A+ Q     K   E+NP H ++K    +V +  ++A      +L+ + A++    SL +P  F  RI
Sbjct:  457 GIEVLLLSDRIDEWMLSYLTEFDGKPLQSITKADLDLG-DLADKEAEEQKAQDESFGSFVERVK----TLLGGRVKEVRLTHRLTDTPAVVSTD------NDQMTTQMAKLFAAAGQPVPEVKYTFELNPEHHLVK----KVAEIADEAQFADWVELLLEQAMLAERGSLENPAAFIKRI 621          
BLAST of CK933992 vs. ExPASy Swiss-Prot
Match: HTPG_SERP5 (Chaperone protein htpG OS=Serratia proteamaculans (strain 568) GN=htpG PE=3 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 1.029e-12
Identity = 53/174 (30.46%), Postives = 88/174 (50.57%), Query Frame = 2
Query:    2 GYEVIFFTDPVDEYLMQYLMDYEDKKFQNVSK--EGL-KLGKDTKDKELKESFKELTKWWKGALASENVDDVKVSNRLDNTPCVVVTSKYGWSANMERIMQSQTLSDASKQAYMRGKRVLEINPRHPIIKELRERVVKDPEDAGVQQTAQLIYQTALMESGFSLNDPKDFASRI 514
            G EV+  +D +DE++M YL +++ K FQ+VSK  + L KL  +T++++  E   E        L  + V DV++++RL +TP +V+T     S  M ++        A+ Q     K + E+NP H ++K  R   V D E     +   L+   AL+    +L DP  F  R+
Sbjct:  454 GIEVLLLSDRIDEWMMSYLTEFDGKPFQSVSKADDALDKLADETEEQKAAEKQLEPFVDRVKTLLGDRVKDVRLTHRLTDTPAIVITDADEMSTQMAKLFA------AAGQEAPAVKYIFELNPEHALVK--RASDVGDNEQ--FAEWIDLLLDQALLAERGTLEDPNQFIRRM 617          
The following BLAST results are available for this feature:
BLAST of CK933992 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 315
Match NameE-valueIdentityDescription
HTPG_FRAT13.537e-1327.03Chaperone protein htpG OS=Francisella tularensis s... [more]
HTPG_BURTA3.537e-1330.29Chaperone protein htpG OS=Burkholderia thailandens... [more]
HTPG_ANAMM3.537e-1325.93Chaperone protein htpG OS=Anaplasma marginale (str... [more]
HTPG_RALEJ4.619e-1326.70Chaperone protein htpG OS=Ralstonia eutropha (stra... [more]
HTPG_HAES14.619e-1332.20Chaperone protein htpG OS=Haemophilus somnus (stra... [more]
HTPG_DESPS4.619e-1329.10Chaperone protein htpG OS=Desulfotalea psychrophil... [more]
HTPG_BURS34.619e-1329.55Chaperone protein htpG OS=Burkholderia sp. (strain... [more]
HTPG_EXIS27.880e-1326.90Chaperone protein htpG OS=Exiguobacterium sibiricu... [more]
HTPG_AGGAC7.880e-1330.00Chaperone protein htpG OS=Aggregatibacter actinomy... [more]
HTPG_SERP51.029e-1230.46Chaperone protein htpG OS=Serratia proteamaculans ... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004542_G03 Developing fruit peel at 38 DAFB Citrus sinensis cDNA clone P38DAB10001_IVF_G03 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK933992 ID=CK933992; Name=CK933992; organism=Citrus sinensis; type=EST; length=894bp
GGGCTATGAGGTGATTTTCTTCACTGATCCAGTTGATGAATACCTGATGC
AATACCTGATGGATTATGAAGACAAAAAGTTCCAAAATGTATCTAAAGAG
GGTCTTAAACTTGGTAAAGACACTAAAGATAAGGAACTTAAGGAGTCATT
CAAGGAGCTCACGAAATGGTGGAAGGGTGCTCTTGCCAGCGAGAACGTGG
ATGATGTGAAAGTAAGCAACCGCTTGGATAACACCCCTTGCGTAGTTGTG
ACATCAAAGTATGGTTGGAGTGCGAATATGGAGAGGATCATGCAGTCTCA
GACTCTCTCAGATGCTAGCAAGCAAGCATATATGCGGGGCAAGAGGGTGC
TTGAAATCAATCCAAGGCATCCAATCATCAAAGAGCTCCGGGAGAGAGTC
GTCAAGGACCCTGAGGATGCGGGTGTCCAGCAAACAGCCCAACTCATTTA
CCAGACGGCACTCATGGAGAGTGGCTTTTCGCTCAATGATCCCAAGGATT
TTGCCTCCCGAATTTACAGCACGGTGAAATCTAGCCTTAACATTAGCCCT
GATGCAGCTGTTGAGGAGGAAGATGATGTAGAAGAGACTGATGCTGACAC
TGAAATGAAAGAATCTTCGGCTGCCAAAGAGGACGTGGATACAGAGTATT
CTGGCAAGGATGAGTTGTAGATTGCCTAATAAAAGCATGGGCAACAACAT
CCCAGTTTCTTAGGAAAGCATAAACGCTCTGCATAGTGCGTTCATTTCCA
GTTTTGAAAACTTTGGTGAAAAAACGTTTTAGATCTTAGATTCAATGTAA
CCATAATCACCGGGAATTTTGTCTTTTAACAGTTGACACTATCAATTATG
GATGAATCAGCGTGTCAAAAAAAAAAAAAAAAAAAAAAAAAAAA
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