CK933992

Overview
NameCK933992
Unique NameCK933992
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length894
Libraries
Library NameType
Developing fruit peel at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK933992 vs. ExPASy Swiss-Prot
Match: HTPG_HAES2 (Chaperone protein htpG OS=Haemophilus somnus (strain 2336) GN=htpG PE=3 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 1.029e-12
Identity = 56/175 (32.00%), Postives = 86/175 (49.14%), Query Frame = 2
Query:    8 EVIFFTDPVDEYLMQYLMDYEDKKFQNVSKEGLKLGKDTKDKELKESFKELTKWWKG------ALASENVDDVKVSNRLDNTPCVVVTSKYGWSANMERIMQSQTLSDASKQAYMRGKRVLEINPRHPIIKELRERVVKDPEDAGVQQTAQLIYQTALMESGFSLNDPKDFASRI 514
            EV+  +D +DE+++ YL +++ K+ Q ++K  L LG D  DKE +E  KE  K +         L  E V DV++++RL +TP VV T       N +   Q   L  A+ Q     K   E+NP H ++K++ +      ED        L+ Q  L E G SL +P  F  R+
Sbjct:  459 EVLLLSDRIDEWMLSYLTEFDGKQLQPITKADLDLG-DLADKEQEEQ-KEQDKTFSSFIERVKTLLGERVKDVRLTHRLTDTPAVVSTD------NDQMTTQMAKLFAAAGQPVPEVKYTFELNPEHHLVKKVADFA---DEDEFANWIELLLEQAMLAERG-SLENPTAFIKRV 621          
BLAST of CK933992 vs. ExPASy Swiss-Prot
Match: HTPG_BURCM (Chaperone protein htpG OS=Burkholderia ambifaria (strain ATCC BAA-244 / AMMD) GN=htpG PE=3 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 1.029e-12
Identity = 50/176 (28.41%), Postives = 91/176 (51.70%), Query Frame = 2
Query:    2 GYEVIFFTDPVDEYLMQYLMDYEDKKFQNVSKEGLKLGKDTKDKELK------ESFKELTKWWKGALASENVDDVKVSNRLDNTPCVVVTSKYGWSANMERIMQSQTLSDASKQAYMRGKRVLEINPRHPIIKELRERVVKDPEDAGVQQTAQLIYQTALMESGFSLNDPKDFASR 511
            G EV+  TD VDE+++ +L +++ K   +V++  L LG +  D+E K      E+ K + +  K AL  + V +V+V+ RL ++P  +V      S  ++R++++   +  + Q       +LEINP H ++K+L      + + A       L++  AL+  G  L+DP  F  R
Sbjct:  461 GVEVLLLTDRVDEWMLSFLHEFDGKPLASVARGDLDLG-ELNDEEKKAQEQAGEAIKPVVEKMKEALG-DKVKEVRVTFRLTDSPSCLVADDNDMSGYLQRMLKAAGQNAPAMQP------ILEINPEHALVKQL------NADSASFGDWCHLLFDQALLAEGGMLDDPASFVKR 622          
BLAST of CK933992 vs. ExPASy Swiss-Prot
Match: HTPG_ACIAD (Chaperone protein htpG OS=Acinetobacter sp. (strain ADP1) GN=htpG PE=3 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 1.029e-12
Identity = 50/179 (27.93%), Postives = 90/179 (50.28%), Query Frame = 2
Query:    2 GYEVIFFTDPVDEYLMQYLMDYEDKKFQNVSKEGLKLGKDTKDKELKESFKELTKWWKGAL------ASENVDDVKVSNRLDNTPCVVVTSKYGWSANMERIMQSQTLSDASKQAYMRGKRVLEINPRHPIIKELRERVVKDPEDAGVQQTAQLIYQTALMESGFSLNDPKDFASRIYS 520
            G EV+  ++ VDE+ M ++ +++    QNVSK  + LG D +D E K++ ++  + +K  +        +   +V+V+ RL ++P  +VTS    S  + R+++       + QA    K +LEINP HP++++L          A     A +I+  A++  G    DP  +  RI S
Sbjct:  472 GIEVLLMSERVDEWAMNFVHEFDGTPLQNVSKGAVDLG-DLQDAEEKKALEQAAEQFKPVVDKLTDALKDKTKEVRVTTRLVDSPACLVTSDGELSPQLIRMLKQ------AGQAVPESKPILEINPEHPLVQKLE-------GSAQFDDLANVIFDQAVIAEGGLPEDPAAYVKRINS 636          
BLAST of CK933992 vs. ExPASy Swiss-Prot
Match: H90B2_HUMAN (Putative heat shock protein HSP 90-beta 2 OS=Homo sapiens GN=HSP90AB2P PE=1 SV=2)

HSP 1 Score: 74.3294 bits (181), Expect = 1.029e-12
Identity = 41/100 (41.00%), Postives = 65/100 (65.00%), Query Frame = 2
Query:   11 VIFFTDPVDEYLMQYLMDYEDKKFQNVSKEGLKLGKDTKDK----ELKESFKELTKWWKGALASENVDDVKVSNRLDNTPCVVVTSKYGWSANMERIMQS 298
            V++ T+P+D Y    L +++ K   +V+KEGL+L +D ++K    E K  F+ L K+ K  L  + V+ V VSNRL ++ C +VTS Y W+ANME+IM++
Sbjct:  286 VVYMTEPIDGY---QLKEFDGKSLVSVTKEGLELPEDGEEKKRMEERKAKFENLCKFMKETL-DKKVEMVTVSNRLVSSSCCIVTSTYSWTANMEQIMKA 381          
BLAST of CK933992 vs. ExPASy Swiss-Prot
Match: HTPG_DESHY (Chaperone protein htpG OS=Desulfitobacterium hafniense (strain Y51) GN=htpG PE=3 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 1.344e-12
Identity = 55/183 (30.05%), Postives = 98/183 (53.55%), Query Frame = 2
Query:    5 YEVIFFTDPVDEYLMQYLMDYEDKKFQNVSKEGLKL----GKDTKDKEL-KESFKELTKWWKGALASENVDDVKVSNRLDNTPCVVVTSKYGWSANMERIMQSQTLSDASKQAYMRGKRVLEINPRHPIIKELRERVVKDPEDAGVQQTAQLIYQTALMESGFSLNDPKDFASRIYSTVKSSL 538
            YEVI+  D +D+Y+   + +Y+ K+  +     L L    G   ++K L +E  KE   W K  L  E V +V+ S RL ++P +++ S YG + +M+R+MQ   L +   Q    G  +LEINP+H +I+ L +  ++  ED+     A+ ++  A + +G  + DP+   SR+   ++ +L
Sbjct:  442 YEVIYTYDGIDDYVFDMIREYDGKRLLSADHGDLNLADEDGASAEEKLLSEEELKEFNDWLKEVL-GEKVTEVRESKRLVDSPAIIL-SHYG-THSMQRMMQ---LMNRDLQDVPAG--ILEINPKHVLIQRLND--LRKQEDSFAPLAAEQLFANAQIAAGI-IVDPRSMVSRLNEILEKAL 613          
BLAST of CK933992 vs. ExPASy Swiss-Prot
Match: HTPG_BURCH (Chaperone protein htpG OS=Burkholderia cenocepacia (strain HI2424) GN=htpG PE=3 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 1.344e-12
Identity = 50/176 (28.41%), Postives = 91/176 (51.70%), Query Frame = 2
Query:    2 GYEVIFFTDPVDEYLMQYLMDYEDKKFQNVSKEGLKLGKDTKDKELK------ESFKELTKWWKGALASENVDDVKVSNRLDNTPCVVVTSKYGWSANMERIMQSQTLSDASKQAYMRGKRVLEINPRHPIIKELRERVVKDPEDAGVQQTAQLIYQTALMESGFSLNDPKDFASR 511
            G EV+  TD VDE+++ +L +++ K   +V++  L LG +  D+E K      E+ K + +  K AL  + V +V+V+ RL ++P  +V      S  ++R++++   +  + Q       +LEINP H ++K+L      + + A       L++  AL+  G  L+DP  F  R
Sbjct:  461 GVEVLLLTDRVDEWMLSFLHEFDGKPLASVARGDLDLG-ELNDEEKKAQEQAGEAIKPVVEKMKEALG-DKVKEVRVTFRLTDSPSCLVADDNDMSGYLQRMLKAAGQNAPAMQP------ILEINPEHALVKQL------NADSADFGDWCHLLFDQALLAEGGMLDDPASFVKR 622          
BLAST of CK933992 vs. ExPASy Swiss-Prot
Match: HTPG_BURCA (Chaperone protein htpG OS=Burkholderia cenocepacia (strain AU 1054) GN=htpG PE=3 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 1.344e-12
Identity = 50/176 (28.41%), Postives = 91/176 (51.70%), Query Frame = 2
Query:    2 GYEVIFFTDPVDEYLMQYLMDYEDKKFQNVSKEGLKLGKDTKDKELK------ESFKELTKWWKGALASENVDDVKVSNRLDNTPCVVVTSKYGWSANMERIMQSQTLSDASKQAYMRGKRVLEINPRHPIIKELRERVVKDPEDAGVQQTAQLIYQTALMESGFSLNDPKDFASR 511
            G EV+  TD VDE+++ +L +++ K   +V++  L LG +  D+E K      E+ K + +  K AL  + V +V+V+ RL ++P  +V      S  ++R++++   +  + Q       +LEINP H ++K+L      + + A       L++  AL+  G  L+DP  F  R
Sbjct:  461 GVEVLLLTDRVDEWMLSFLHEFDGKPLASVARGDLDLG-ELNDEEKKAQEQAGEAIKPVVEKMKEALG-DKVKEVRVTFRLTDSPSCLVADDNDMSGYLQRMLKAAGQNAPAMQP------ILEINPEHALVKQL------NADSADFGDWCHLLFDQALLAEGGMLDDPASFVKR 622          
BLAST of CK933992 vs. ExPASy Swiss-Prot
Match: HTPG_WOLTR (Chaperone protein htpG OS=Wolbachia sp. subsp. Brugia malayi (strain TRS) GN=htpG PE=3 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 1.755e-12
Identity = 46/181 (25.41%), Postives = 91/181 (50.28%), Query Frame = 2
Query:    2 GYEVIFFTDPVDEYLMQYLMDYEDKKFQNVSKEGLKLGK---DTKDKELKE-------SFKELTKWWKGALASENVDDVKVSNRLDNTPCVVVTSKYGWSANMERIMQSQTLSDASKQAYMRGKRVLEINPRHPIIKELRERVVKDPEDAGVQQTAQLIYQTALMESGFSLNDPKDFASRI 514
            G EV+ F DPVD++    + +Y+ +KF++V++  + L K   + KDKE K        +   + +++   L +  V  VK+S +L ++P  +   +      MER ++ Q       Q   R  +VLE+N +H +IK + +   ++ E+  ++    L++  A +  G  ++D   FA ++
Sbjct:  455 GLEVLLFVDPVDDFWTSVIHEYKGQKFKSVTRADVDLEKFSPEEKDKENKSDEERAEGNTDSILQYFTKVLGNA-VKSVKISKKLTDSPVCLAVDEGAMDLRMERFLREQ------NQLNYRTPKVLEVNTKHSVIKSIIKSYAENGENPTLEDMVHLLFYQACIVEGEEMDDASLFAKKL 628          
BLAST of CK933992 vs. ExPASy Swiss-Prot
Match: HTPG_DESVH (Chaperone protein htpG OS=Desulfovibrio vulgaris (strain Hildenborough / ATCC 29579 / NCIMB 8303) GN=htpG PE=3 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 1.755e-12
Identity = 51/191 (26.70%), Postives = 102/191 (53.40%), Query Frame = 2
Query:    2 GYEVIFFTDPVDEYLMQYLMDYEDKKFQNVSK-EGLKLGKD------------TKDKELKESFKELTKWWKGALASENVDDVKVSNRLDNTPCVVVTSKYGWSANMERIMQSQTLSDASKQAYMRGKRVLEINPRHPIIKELRERVVKDPEDAGVQQTAQLIYQTALMESGFSLNDPKDFASRIYSTVKSS 535
            G EV++  +P+DE++++ L  Y D  F+ V   +G KL +             T+D++   +F  L +  K AL  + V+DV++S+RL ++P  +V      +++M+R+++     ++        ++V E+N  HPI++ L +    D  D  V+ T + ++ T+LM  G+ L DP + A+ ++  ++ S
Sbjct:  447 GLEVLYLLEPIDEFVLETLDSYSDFSFKAVEHADGEKLAQFEDTGPARDVTPLTEDEDA--AFARLIERMK-ALLGDAVEDVRISHRLADSPACLVQPGGASTSSMDRLLRVLHKDESVP------RKVFEVNRDHPILRNLLKVFTSDASDPLVEDTTRQLFATSLMLDGY-LKDPHELAAMMHRLMEKS 627          
BLAST of CK933992 vs. ExPASy Swiss-Prot
Match: HTPG_BACLD (Chaperone protein htpG OS=Bacillus licheniformis (strain DSM 13 / ATCC 14580) GN=htpG PE=3 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 1.755e-12
Identity = 49/178 (27.53%), Postives = 89/178 (50.00%), Query Frame = 2
Query:    2 GYEVIFFTDPVDEYLMQYLMDYEDKKFQNVSKEGLKLGKDTK-------DKELKESFKELTKWWKGALASENVDDVKVSNRLDNTPCVVVTSKYGWSANMERIMQSQTLSDASKQAYMRGKRVLEINPRHPIIKELRERVVKDPEDAGVQQTAQLIYQTALMESGFSLNDPKDFASRI 514
            GYE+++FT+ +DE+ ++ L +Y++K+F++VS   L +  D +       D + K+ F+E+ K   G      V  V+ S RL  T  V + +    +  ME+I+ +          +++  +VLEIN  H + K L+     D +    +    L+Y  AL+  G  + DP +F + I
Sbjct:  457 GYEILYFTEDIDEFAIKMLANYQEKEFKSVSSGDLGIENDDEQNQSDGDDSQYKDLFEEMKKTLDG-----KVKSVRASKRL-KTHSVCLAADGEVTIEMEKILNAM-----PDNQHVKADKVLEINTNHEVFKTLQNAFDNDKDK--FKLYTGLLYNQALLIEGLPIEDPVEFTNDI 621          
The following BLAST results are available for this feature:
BLAST of CK933992 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 315
Match NameE-valueIdentityDescription
HTPG_HAES21.029e-1232.00Chaperone protein htpG OS=Haemophilus somnus (stra... [more]
HTPG_BURCM1.029e-1228.41Chaperone protein htpG OS=Burkholderia ambifaria (... [more]
HTPG_ACIAD1.029e-1227.93Chaperone protein htpG OS=Acinetobacter sp. (strai... [more]
H90B2_HUMAN1.029e-1241.00Putative heat shock protein HSP 90-beta 2 OS=Homo ... [more]
HTPG_DESHY1.344e-1230.05Chaperone protein htpG OS=Desulfitobacterium hafni... [more]
HTPG_BURCH1.344e-1228.41Chaperone protein htpG OS=Burkholderia cenocepacia... [more]
HTPG_BURCA1.344e-1228.41Chaperone protein htpG OS=Burkholderia cenocepacia... [more]
HTPG_WOLTR1.755e-1225.41Chaperone protein htpG OS=Wolbachia sp. subsp. Bru... [more]
HTPG_DESVH1.755e-1226.70Chaperone protein htpG OS=Desulfovibrio vulgaris (... [more]
HTPG_BACLD1.755e-1227.53Chaperone protein htpG OS=Bacillus licheniformis (... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCGF1004542_G03 Developing fruit peel at 38 DAFB Citrus sinensis cDNA clone P38DAB10001_IVF_G03 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK933992 ID=CK933992; Name=CK933992; organism=Citrus sinensis; type=EST; length=894bp
GGGCTATGAGGTGATTTTCTTCACTGATCCAGTTGATGAATACCTGATGC
AATACCTGATGGATTATGAAGACAAAAAGTTCCAAAATGTATCTAAAGAG
GGTCTTAAACTTGGTAAAGACACTAAAGATAAGGAACTTAAGGAGTCATT
CAAGGAGCTCACGAAATGGTGGAAGGGTGCTCTTGCCAGCGAGAACGTGG
ATGATGTGAAAGTAAGCAACCGCTTGGATAACACCCCTTGCGTAGTTGTG
ACATCAAAGTATGGTTGGAGTGCGAATATGGAGAGGATCATGCAGTCTCA
GACTCTCTCAGATGCTAGCAAGCAAGCATATATGCGGGGCAAGAGGGTGC
TTGAAATCAATCCAAGGCATCCAATCATCAAAGAGCTCCGGGAGAGAGTC
GTCAAGGACCCTGAGGATGCGGGTGTCCAGCAAACAGCCCAACTCATTTA
CCAGACGGCACTCATGGAGAGTGGCTTTTCGCTCAATGATCCCAAGGATT
TTGCCTCCCGAATTTACAGCACGGTGAAATCTAGCCTTAACATTAGCCCT
GATGCAGCTGTTGAGGAGGAAGATGATGTAGAAGAGACTGATGCTGACAC
TGAAATGAAAGAATCTTCGGCTGCCAAAGAGGACGTGGATACAGAGTATT
CTGGCAAGGATGAGTTGTAGATTGCCTAATAAAAGCATGGGCAACAACAT
CCCAGTTTCTTAGGAAAGCATAAACGCTCTGCATAGTGCGTTCATTTCCA
GTTTTGAAAACTTTGGTGAAAAAACGTTTTAGATCTTAGATTCAATGTAA
CCATAATCACCGGGAATTTTGTCTTTTAACAGTTGACACTATCAATTATG
GATGAATCAGCGTGTCAAAAAAAAAAAAAAAAAAAAAAAAAAAA
back to top