CK933992

Overview
NameCK933992
Unique NameCK933992
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length894
Libraries
Library NameType
Developing fruit peel at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK933992 vs. ExPASy Swiss-Prot
Match: HTPG_CHLCH (Chaperone protein htpG OS=Chlorobium chlorochromatii (strain CaD3) GN=htpG PE=3 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 8.712e-12
Identity = 44/181 (24.31%), Postives = 93/181 (51.38%), Query Frame = 2
Query:    2 GYEVIFFTDPVDEYLMQYLMDYEDKKFQNVSKEGLKLGKDTKDKE---LKESFKELTKWWKGALASENVDDVKVSNRLDNTPCVVVTSKYGWSANMERIMQSQTLSDASKQAYMRGKRVLEINPRHPIIKELRERVVKDPEDAGVQQTAQLIYQTALMESGFSLNDPKDFASRIYSTVKSS 535
            G EV+  +DPVD +++  + +++ K  +++ K      + + +K           + + +K AL++E V+DV  S RL ++P  +V+ K    + +ER+M+               KR+LE+N  HPI++ +   ++ D  +  ++  A+ +Y+ AL   G SL D   + +R+   ++++
Sbjct:  453 GIEVLLLSDPVDMFVIPSIHEFDKKPLKSIEKADCDFSQQSSNKAEPVAPNLLNPVLQAFKEALSNE-VEDVVESRRLVSSPVTLVSGKDAIDSQLERMMKMMNTPMPP------AKRILEVNSSHPIVRNIAGMIMADANNPLIKTVARQLYEGALFLEG-SLEDATSYVTRMNELIEAA 625          
BLAST of CK933992 vs. ExPASy Swiss-Prot
Match: HTPG_TREDE (Chaperone protein htpG OS=Treponema denticola GN=htpG PE=3 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 1.138e-11
Identity = 51/176 (28.98%), Postives = 92/176 (52.27%), Query Frame = 2
Query:    2 GYEVIFFTDPVDEYLMQYLMDYEDKKFQNVSKEG----LKLGKDTKDKELKE-SFKELTKWWKGALASENVDDVKVSNRLDNTPCVVVTSKYGWSANMERIMQSQTLSDASKQAYMRGKRVLEINPRHPIIKELRERVVKDPEDAGVQQTAQLIYQTALMESGFSLNDPKDFASRI 514
            G+EV+   D +D+ ++  L  Y+D + +  ++ G    L   ++TK+ E KE  FK + +  K  L  + V +V+ S RL ++P  +V  +   S  MER+M++    + S       K +LE+N  HP++++L++   KD E   V+  + L+ + AL+     L  P DF  R+
Sbjct:  467 GFEVLIMPDEIDDIIIPSLGKYKDWELKAANRAGSDKELNTEEETKEAEKKEKDFKPVLEKIKEVL-GDKVKEVRFSKRLSDSPSCIVVDETDPSLQMERMMRAMGQFNTSAV-----KPILEVNADHPLVQKLKDS--KDKE--FVEDMSNLLLEQALLVESGELKAPVDFVKRL 632          
BLAST of CK933992 vs. ExPASy Swiss-Prot
Match: HTPG_PASMU (Chaperone protein htpG OS=Pasteurella multocida GN=htpG PE=3 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 1.138e-11
Identity = 54/188 (28.72%), Postives = 91/188 (48.40%), Query Frame = 2
Query:    2 GYEVIFFTDPVDEYLMQYLMDYEDKKFQNVSKEGLKLGKDTKDKELKE---------SFKELTKWWKGALASENVDDVKVSNRLDNTPCVVVTSKYGWSANMERIMQSQTLSDASKQAYMRGKRVLEINPRHPIIKELRERVVKDPEDAGVQQTAQLIYQTALMESGFSLNDPKDFASRIYSTVKSSL 538
            G EV+  +D +DE+++ YL +++ K  Q +SK  L LG D  DKE            SF E  K     L  E V +V++++RL +TP VV T     +  M ++        A+ QA    K   E+NP H ++    ++V +  ++       +L+ + A++    SL +P  F  R+ +T+ S L
Sbjct:  457 GIEVLLLSDRIDEWMLSYLTEFDGKPLQTISKADLDLG-DLADKEEDSQKAQDEQYASFVERVK----TLLGERVKEVRLTHRLTDTPAVVSTGDDQMTTQMAKLFA------AAGQAMPEVKYTFELNPEHGLV----QKVAEIADEQQFADWIELLLEQAMLAERGSLENPVAFIKRM-NTLLSKL 628          
BLAST of CK933992 vs. ExPASy Swiss-Prot
Match: HTPG_EHRRW (Chaperone protein htpG OS=Ehrlichia ruminantium (strain Welgevonden) GN=htpG PE=3 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 1.138e-11
Identity = 49/193 (25.39%), Postives = 90/193 (46.63%), Query Frame = 2
Query:    2 GYEVIFFTDPVDEYLMQYLMDYED-------------KKFQNVSKEGLKLGKDTKDKELKESFKELTKWWKGALASENVDDVKVSNRLDNTPCVVVTSKYGWSANMERIMQSQTLSDASKQAYMRGKRVLEINPRHPIIKELRERVVKDPEDAGVQQTAQLIYQTALMESGFSLNDPKDFASRIYSTVKSSLN 541
            G EV+   DPVD++    + DY+              +KF +V K+        +D + KE   +   +    L +  V +V+VS +L ++P  +  +       MER ++ Q      KQ   +  ++LEIN +HPI+ ++ ++  ++ E+A +     L+   A +  G  L +  DFA R+ + V S +N
Sbjct:  453 GIEVLLLVDPVDDFWTNVVTDYQKVPLRSVIRADEDLEKFSDVEKDDESKESQNEDAQSKEKVDKFISYAAQVLTNL-VSNVRVSKKLTDSPVCLAVADGSMDIRMERFLREQ------KQLNYKSTKILEINSKHPIVSKMIDQYAENGENAVLCNMLHLLLGQACILEGEELQNVSDFAERM-NNVLSQIN 637          
BLAST of CK933992 vs. ExPASy Swiss-Prot
Match: HTPG_EHRCJ (Chaperone protein htpG OS=Ehrlichia canis (strain Jake) GN=htpG PE=3 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 1.486e-11
Identity = 54/183 (29.51%), Postives = 86/183 (46.99%), Query Frame = 2
Query:    2 GYEVIFFTDPVDEYLMQYLMDYEDKKFQNVSK--EGL-KLGKDTKDKELKESFKE-------LTKWWKGALA--SENVDDVKVSNRLDNTPCVVVTSKYGWSANMERIMQSQTLSDASKQAYMRGKRVLEINPRHPIIKELRERVVKDPEDAGVQQTAQLIYQTALMESGFSLNDPKDFASRI 514
            G EVI   DPVD++    + DY+    ++V +  E L KL    KD+E+ ES  E       +  + K A+    + V  V+VS +L N+P  +  +       MER ++ Q      KQ   +  ++LEINP+HPI+  + +      E+A +     L+   A +  G  L D   FA R+
Sbjct:  452 GIEVILLIDPVDDFWTNVVTDYQRVPLKSVIRADEDLEKLAHLKKDEEVGESKDENPDSKEKVDAFVKYAIQVLDKLVSGVRVSKKLTNSPVCLAVADGSMDIRMERFLREQ------KQLNYKSTKILEINPKHPIVSRMIDEYANTGENAVLDNMLHLLLGQACILEGEELEDVSSFAERM 628          
BLAST of CK933992 vs. ExPASy Swiss-Prot
Match: HTPG_CHLPD (Chaperone protein htpG OS=Chlorobium phaeobacteroides (strain DSM 266) GN=htpG PE=3 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 1.486e-11
Identity = 45/181 (24.86%), Postives = 93/181 (51.38%), Query Frame = 2
Query:    2 GYEVIFFTDPVDEYLMQYLMDYEDKKFQNVSKEGL---KLGKDTKDKELKESFKELTKWWKGALASENVDDVKVSNRLDNTPCVVVTSKYGWSANMERIMQSQTLSDASKQAYMRGKRVLEINPRHPIIKELRERVVKDPEDAGVQQTAQLIYQTALMESGFSLNDPKDFASRIYSTVKSS 535
            G EV+  +DPVD +++  + +Y+ K  +++ K  +   + G D  +  L E+  +           + ++DV  S+RL ++P  +V+ K    ++ME++M+   +  A   A    K++LE+N  HPIIK L   ++ +  +  ++   Q +Y  AL+  G +L+    F  R+   ++++
Sbjct:  449 GIEVLLLSDPVDVFVIPSIHEYDKKPLKSIEKADIDFTRTGDDKTEPPLPETLSQPLLGLFRQTIGDVIEDVVESHRLVSSPVTLVSGKDSLDSSMEKMMK---MMHAEMPA---AKKILEVNTSHPIIKNLSGMIMANEHNPLIRTVIQQLYDGALLHEG-NLDATTGFLQRMNELIEAA 622          
BLAST of CK933992 vs. ExPASy Swiss-Prot
Match: HTPG_ACTSZ (Chaperone protein htpG OS=Actinobacillus succinogenes (strain ATCC 55618 / 130Z) GN=htpG PE=3 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 1.486e-11
Identity = 49/177 (27.68%), Postives = 83/177 (46.89%), Query Frame = 2
Query:    2 GYEVIFFTDPVDEYLMQYLMDYEDKKFQNVSKEGLKLGKDTKDKELKESFKELTKWWKG------ALASENVDDVKVSNRLDNTPCVVVTSKYGWSANMERIMQSQTLSDASKQAYMRGKRVLEINPRHPIIKELRERVVKDPEDAGVQQTAQLIYQTALMESGFSLNDPKDFASRI 514
            G EV+  +D +DE+++ YL +++ K  Q+++K  L LG D  DK   E  K   +   G       L  E V DV++++RL +TP VV T       N +   Q   L   S Q     K   E+NP H ++K    +     +++      +L+ + A++    +L +P  F  R+
Sbjct:  457 GIEVLLLSDRIDEWMLSYLTEFDGKPLQSITKADLDLG-DLADKTEAEKEKAQDEALSGFIERVKTLLGERVKDVRLTHRLTDTPAVVSTD------NDQMTTQMAKLFAMSGQPVPEVKYTFELNPDHALVK----KTAALTDESAFADWVELLLEQAMLSERGTLENPTAFIKRV 622          
BLAST of CK933992 vs. ExPASy Swiss-Prot
Match: HTPG_POLNA (Chaperone protein htpG OS=Polaromonas naphthalenivorans (strain CJ2) GN=htpG PE=3 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.941e-11
Identity = 48/177 (27.12%), Postives = 85/177 (48.02%), Query Frame = 2
Query:    2 GYEVIFFTDPVDEYLMQYLMDYEDKKFQNVSKEGLKLGK--DTKDK----ELKESFKELTKWWKGALASENVDDVKVSNRLDNTPCVVVTSKYGWSANMERIMQSQTLSDASKQAYMRGKRVLEINPRHPIIKELRERVVKDPEDAGVQQTAQLIYQTALMESGFSLNDPKDFASRI 514
            G EV+   D VDE+ + YL +++    Q+V+K  + LGK  D  +K    E +  FK +    K AL  +   DV+ ++RL ++P  +V      S  + R+++       + Q     K +LE+N +HP++++L        E A     A +++  AL+  G    DP  +  R+
Sbjct:  459 GIEVLLMADRVDEWALNYLNEFDGTPLQSVAKGAVDLGKLQDEDEKKAAEEAQTQFKPILDKLKEAL-KDKASDVRATSRLVDSPACLVVQDGDMSTQLARMLKQ------AGQTVPEVKPILEVNAQHPLVRKLE----ASSELASFDDLANILFDQALLAEGGMPTDPAAYVRRV 624          
BLAST of CK933992 vs. ExPASy Swiss-Prot
Match: HTPG_PHOLL (Chaperone protein htpG OS=Photorhabdus luminescens subsp. laumondii GN=htpG PE=3 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.941e-11
Identity = 51/175 (29.14%), Postives = 84/175 (48.00%), Query Frame = 2
Query:    2 GYEVIFFTDPVDEYLMQYLMDYEDKKFQNVSKEGLKLGK--DTKDKELKESFKELTKWWK--GALASENVDDVKVSNRLDNTPCVVVTSKYGWSANMERIMQSQTLSDASKQAYMRGKRVLEINPRHPIIKELRERVVKDPEDAGVQQTAQLIYQTALMESGFSLNDPKDFASRI 514
            G EV+  ++ +DE++M YL D++ KKFQ+VSK    L K  D    E +E  K+L  + +    L  + V +VK+++RL +TP +V T+    S  M ++        A+ Q     K   E+NP H ++K          ++       +L+   AL     +L DP  F  R+
Sbjct:  457 GIEVLLLSERIDEWMMGYLTDFDGKKFQSVSKADESLDKLADENKAEQEEIEKQLEPFVERVKTLLGDRVKEVKLTHRLTDTPAIVTTNVDEMSTQMAKLFA------AAGQQVPDVKYNFELNPDHQLVK----LAADISDEVQFADWIELLLDQALFAERGTLEDPNQFIRRM 621          
BLAST of CK933992 vs. ExPASy Swiss-Prot
Match: HTPG_HAEIN (Chaperone protein htpG OS=Haemophilus influenzae GN=htpG PE=3 SV=2)

HSP 1 Score: 70.0922 bits (170), Expect = 1.941e-11
Identity = 51/177 (28.81%), Postives = 86/177 (48.59%), Query Frame = 2
Query:    2 GYEVIFFTDPVDEYLMQYLMDYEDKKFQNVSKEGLKLGKDTKDKELK------ESFKELTKWWKGALASENVDDVKVSNRLDNTPCVVVTSKYGWSANMERIMQSQTLSDASKQAYMRGKRVLEINPRHPIIKELRERVVKDPEDAGVQQTAQLIYQTALMESGFSLNDPKDFASRI 514
            G EV+  +D +DE+++ YL +++ K+ Q+++K  L LG D  DKE +      E+F    +  K  L  E V  V++++ L +TP VV T       N +   Q   L  A+ Q     K   E+NP H ++K    +V    ++       +L+ + A++    SL +P  F  RI
Sbjct:  457 GIEVLLLSDRIDEWMLSYLTEFDGKQLQSITKADLDLG-DLADKESETQKQQDEAFGSFIERVKNLLG-ERVKTVRLTHNLTDTPAVVSTD------NDQMTTQMAKLFAAAGQPVPEVKYTFELNPEHHLVK----KVADIADETEFADWVELLLEQAMLAERGSLENPAAFIKRI 621          
The following BLAST results are available for this feature:
BLAST of CK933992 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 315
Match NameE-valueIdentityDescription
HTPG_CHLCH8.712e-1224.31Chaperone protein htpG OS=Chlorobium chlorochromat... [more]
HTPG_TREDE1.138e-1128.98Chaperone protein htpG OS=Treponema denticola GN=h... [more]
HTPG_PASMU1.138e-1128.72Chaperone protein htpG OS=Pasteurella multocida GN... [more]
HTPG_EHRRW1.138e-1125.39Chaperone protein htpG OS=Ehrlichia ruminantium (s... [more]
HTPG_EHRCJ1.486e-1129.51Chaperone protein htpG OS=Ehrlichia canis (strain ... [more]
HTPG_CHLPD1.486e-1124.86Chaperone protein htpG OS=Chlorobium phaeobacteroi... [more]
HTPG_ACTSZ1.486e-1127.68Chaperone protein htpG OS=Actinobacillus succinoge... [more]
HTPG_POLNA1.941e-1127.12Chaperone protein htpG OS=Polaromonas naphthaleniv... [more]
HTPG_PHOLL1.941e-1129.14Chaperone protein htpG OS=Photorhabdus luminescens... [more]
HTPG_HAEIN1.941e-1128.81Chaperone protein htpG OS=Haemophilus influenzae G... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCGF1004542_G03 Developing fruit peel at 38 DAFB Citrus sinensis cDNA clone P38DAB10001_IVF_G03 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK933992 ID=CK933992; Name=CK933992; organism=Citrus sinensis; type=EST; length=894bp
GGGCTATGAGGTGATTTTCTTCACTGATCCAGTTGATGAATACCTGATGC
AATACCTGATGGATTATGAAGACAAAAAGTTCCAAAATGTATCTAAAGAG
GGTCTTAAACTTGGTAAAGACACTAAAGATAAGGAACTTAAGGAGTCATT
CAAGGAGCTCACGAAATGGTGGAAGGGTGCTCTTGCCAGCGAGAACGTGG
ATGATGTGAAAGTAAGCAACCGCTTGGATAACACCCCTTGCGTAGTTGTG
ACATCAAAGTATGGTTGGAGTGCGAATATGGAGAGGATCATGCAGTCTCA
GACTCTCTCAGATGCTAGCAAGCAAGCATATATGCGGGGCAAGAGGGTGC
TTGAAATCAATCCAAGGCATCCAATCATCAAAGAGCTCCGGGAGAGAGTC
GTCAAGGACCCTGAGGATGCGGGTGTCCAGCAAACAGCCCAACTCATTTA
CCAGACGGCACTCATGGAGAGTGGCTTTTCGCTCAATGATCCCAAGGATT
TTGCCTCCCGAATTTACAGCACGGTGAAATCTAGCCTTAACATTAGCCCT
GATGCAGCTGTTGAGGAGGAAGATGATGTAGAAGAGACTGATGCTGACAC
TGAAATGAAAGAATCTTCGGCTGCCAAAGAGGACGTGGATACAGAGTATT
CTGGCAAGGATGAGTTGTAGATTGCCTAATAAAAGCATGGGCAACAACAT
CCCAGTTTCTTAGGAAAGCATAAACGCTCTGCATAGTGCGTTCATTTCCA
GTTTTGAAAACTTTGGTGAAAAAACGTTTTAGATCTTAGATTCAATGTAA
CCATAATCACCGGGAATTTTGTCTTTTAACAGTTGACACTATCAATTATG
GATGAATCAGCGTGTCAAAAAAAAAAAAAAAAAAAAAAAAAAAA
back to top