CK933992

Overview
NameCK933992
Unique NameCK933992
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length894
Libraries
Library NameType
Developing fruit peel at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
CK933992_ssr317 microsatellite CK933992_ssr317:317..328. BLAST: Citrus ESTs to Prunus persica proteins V1
Csv1_Contig8273 contig Csv1_Contig8273:1851..2742. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CK933992 vs. ExPASy Swiss-Prot
Match: HS90A_BOVIN (Heat shock protein HSP 90-alpha OS=Bos taurus GN=HSP90AA1 PE=2 SV=3)

HSP 1 Score: 165.622 bits (418), Expect = 3.394e-40
Identity = 88/185 (47.57%), Postives = 119/185 (64.32%), Query Frame = 2
Query:    2 GYEVIFFTDPVDEYLMQYLMDYEDKKFQNVSKEGLKLGKDTKDK----ELKESFKELTKWWKGALASENVDDVKVSNRLDNTPCVVVTSKYGWSANMERIMQSQTLSDASKQAYMRGKRVLEINPRHPIIKELRERVVKDPEDAGVQQTAQLIYQTALMESGFSLNDPKDFASRIYSTVKSSLNI 544
            G EVI+  +P+DEY +Q L ++E K   +V+KEGL+L +D ++K    E K  F+ L K  K  L  + V+ V VSNRL  +PC +VTS YGW+ANMERIM++Q L D S   YM  K+ LEINP H II+ LR++   D  D  V+    L+Y+TAL+ SGFSL DP+  A+RIY  +K  L I
Sbjct:  516 GLEVIYMIEPIDEYCVQQLKEFEGKTLVSVTKEGLELPEDEEEKKKQEEKKTKFENLCKIMKDIL-EKKVEKVVVSNRLVTSPCCIVTSTYGWTANMERIMKAQALRDNSTMGYMAAKKHLEINPDHSIIETLRQKAEADKNDKSVKDLVILLYETALLSSGFSLEDPQTHANRIYRMIKLGLGI 699          
BLAST of CK933992 vs. ExPASy Swiss-Prot
Match: H90B3_HUMAN (Putative heat shock protein HSP 90-beta-3 OS=Homo sapiens GN=HSP90AB3P PE=5 SV=1)

HSP 1 Score: 165.622 bits (418), Expect = 3.394e-40
Identity = 82/183 (44.81%), Postives = 122/183 (66.67%), Query Frame = 2
Query:    2 GYEVIFFTDPVDEYLMQYLMDYEDKKFQNVSKEGLKLGKDTKDK----ELKESFKELTKWWKGALASENVDDVKVSNRLDNTPCVVVTSKYGWSANMERIMQSQTLSDASKQAYMRGKRVLEINPRHPIIKELRERVVKDPEDAGVQQTAQLIYQTALMESGFSLNDPKDFASRIYSTVKSSL 538
            G+EV++ T+P+DEY +Q L +++ K   +V+KEGL+L +D ++K    E KE F+ L K  K  L  + V+ V +SNRL ++PC +VTS YGW+ANME+IM++Q L D S   YM  K+ LEINP HPI++ LR++   D  D  V+    L+++TAL+ SGFSL DP+  ++ IY  +K  L
Sbjct:  380 GFEVVYMTEPIDEYCVQQLKEFDGKSLVSVTKEGLELPEDEEEKKKMEESKEKFENLCKLMKEIL-DKKVEKVTISNRLVSSPCCIVTSTYGWTANMEQIMKAQALRDNSTMGYMMAKKHLEINPDHPIMETLRQKAEADKNDKAVKDLVVLLFETALLSSGFSLEDPQTHSNHIYHMIKLGL 561          
BLAST of CK933992 vs. ExPASy Swiss-Prot
Match: ENPL_CANFA (Endoplasmin OS=Canis familiaris GN=HSP90B1 PE=1 SV=1)

HSP 1 Score: 165.236 bits (417), Expect = 4.433e-40
Identity = 83/190 (43.68%), Postives = 119/190 (62.63%), Query Frame = 2
Query:    2 GYEVIFFTDPVDEYLMQYLMDYEDKKFQNVSKEGLKLGKDTKDKELKES----FKELTKWWKGALASENVDDVKVSNRLDNTPCVVVTSKYGWSANMERIMQSQ---TLSDASKQAYMRGKRVLEINPRHPIIKELRERVVKDPEDAGVQQTAQLIYQTALMESGFSLNDPKDFASRIYSTVKSSLNISP 550
            GYEVI+ T+PVDEY +Q L +++ K+FQNV+KEG+K  +  K KE +E+    F+ L  W K     + ++   VS RL  +PC +V S+YGWS NMERIM++Q   T  D S   Y   K+  EINPRHP+IK++  RV +D +D  V   A ++++TA + SG+ L D K +  RI   ++ SLNI P
Sbjct:  562 GYEVIYLTEPVDEYCIQALPEFDGKRFQNVAKEGVKFDESEKTKESREAIEKEFEPLLNWMKDKALKDKIEKAVVSQRLTESPCALVASQYGWSGNMERIMKAQAYQTGKDISTNYYASQKKTFEINPRHPLIKDMLRRVKEDEDDKTVSDLAVVLFETATLRSGYLLPDTKAYGDRIERMLRLSLNIDP 751          
BLAST of CK933992 vs. ExPASy Swiss-Prot
Match: HSP83_LEIIN (Heat shock protein 83-1 OS=Leishmania infantum GN=HSP83-1 PE=3 SV=2)

HSP 1 Score: 164.851 bits (416), Expect = 5.790e-40
Identity = 83/185 (44.86%), Postives = 122/185 (65.95%), Query Frame = 2
Query:    2 GYEVIFFTDPVDEYLMQYLMDYEDKKFQNVSKEGLKLGKDTKDKELKESFK----ELTKWWKGALASENVDDVKVSNRLDNTPCVVVTSKYGWSANMERIMQSQTLSDASKQAYMRGKRVLEINPRHPIIKELRERVVKDPEDAGVQQTAQLIYQTALMESGFSLNDPKDFASRIYSTVKSSLNI 544
            G EV+F T+P+DEY+MQ + D+EDKKF  ++KEG+   +  ++K+ +E  K    +L K  K  L  + V+ V VS  L  +PC++VTS++GWSA+ME+IM++Q L D+S   YM  K+ +E+NPRHPIIKELR RV  D  D  V+    L++ T+L+ SGF L DP  +A RI   +K  L++
Sbjct:  486 GLEVLFMTEPIDEYVMQQVKDFEDKKFACLTKEGVHFEESEEEKQQREEEKAACEKLCKTMKEVLG-DKVEKVIVSECLSTSPCILVTSEFGWSAHMEQIMRNQALRDSSMAQYMMSKKTMELNPRHPIIKELRRRVDADENDKAVKDLVFLLFDTSLLTSGFQLEDPTGYAERINRMIKLGLSL 669          
BLAST of CK933992 vs. ExPASy Swiss-Prot
Match: ENPL_RAT (Endoplasmin OS=Rattus norvegicus GN=Hsp90b1 PE=1 SV=2)

HSP 1 Score: 164.466 bits (415), Expect = 7.562e-40
Identity = 82/190 (43.16%), Postives = 119/190 (62.63%), Query Frame = 2
Query:    2 GYEVIFFTDPVDEYLMQYLMDYEDKKFQNVSKEGLKLGKDTKDKELKES----FKELTKWWKGALASENVDDVKVSNRLDNTPCVVVTSKYGWSANMERIMQSQ---TLSDASKQAYMRGKRVLEINPRHPIIKELRERVVKDPEDAGVQQTAQLIYQTALMESGFSLNDPKDFASRIYSTVKSSLNISP 550
            GYEVI+ T+PVDEY +Q L +++ K+FQNV+KEG+K  +  K KE +E+    F+ L  W K     + ++   VS RL  +PC +V S+YGWS NMERIM++Q   T  D S   Y   K+  EINPRHP+I+++  RV +D +D  V   A ++++TA + SG+ L D K +  RI   ++ SLNI P
Sbjct:  562 GYEVIYLTEPVDEYCIQALPEFDGKRFQNVAKEGVKFDESEKSKESREATEKEFEPLLNWMKDKALKDKIEKAVVSQRLTESPCALVASQYGWSGNMERIMKAQAYQTGKDISTNYYASQKKTFEINPRHPLIRDMLRRVKEDEDDKTVMDLAVVLFETATLRSGYLLPDTKAYGDRIERMLRLSLNIDP 751          
BLAST of CK933992 vs. ExPASy Swiss-Prot
Match: ENPL_MESAU (Endoplasmin (Fragment) OS=Mesocricetus auratus GN=HSP90B1 PE=2 SV=1)

HSP 1 Score: 164.466 bits (415), Expect = 7.562e-40
Identity = 83/190 (43.68%), Postives = 120/190 (63.16%), Query Frame = 2
Query:    2 GYEVIFFTDPVDEYLMQYLMDYEDKKFQNVSKEGLKLGKDTKDKELKES----FKELTKWWKGALASENVDDVKVSNRLDNTPCVVVTSKYGWSANMERIMQSQ---TLSDASKQAYMRGKRVLEINPRHPIIKELRERVVKDPEDAGVQQTAQLIYQTALMESGFSLNDPKDFASRIYSTVKSSLNISP 550
            GYEVI+ T+PVDEY +Q L +++ K+FQNV+KEG+K  +  K KE +E+    F+ L  W K     + ++   VS RL  +PC +V S+YGWS NMERIM++Q   T  D S   Y   K+  EINPRHP+I+++  RV +D +D  V   A ++++TA + SG+ L D K +A RI   ++ SLNI P
Sbjct:  159 GYEVIYLTEPVDEYCIQALPEFDGKRFQNVAKEGVKFDESEKTKENREATEKEFEPLLNWMKDKALKDKIEKAVVSQRLTESPCALVASQYGWSGNMERIMKAQAYQTGKDISTNYYASQKKTFEINPRHPLIRDMLRRVKEDEDDKTVLDLAVVLFETATLRSGYLLPDTKAYADRIERMLRLSLNIDP 348          
BLAST of CK933992 vs. ExPASy Swiss-Prot
Match: ENPL_BOVIN (Endoplasmin OS=Bos taurus GN=HSP90B1 PE=2 SV=1)

HSP 1 Score: 164.466 bits (415), Expect = 7.562e-40
Identity = 82/190 (43.16%), Postives = 119/190 (62.63%), Query Frame = 2
Query:    2 GYEVIFFTDPVDEYLMQYLMDYEDKKFQNVSKEGLKLGKDTKDKELKES----FKELTKWWKGALASENVDDVKVSNRLDNTPCVVVTSKYGWSANMERIMQSQ---TLSDASKQAYMRGKRVLEINPRHPIIKELRERVVKDPEDAGVQQTAQLIYQTALMESGFSLNDPKDFASRIYSTVKSSLNISP 550
            GYEVI+ T+PVDEY +Q L +++ K+FQNV+KEG+K  +  K KE +E+    F+ L  W K     + ++   VS RL  +PC +V S+YGWS NMERIM++Q   T  D S   Y   K+  EINPRHP+I+++  RV +D +D  V   A ++++TA + SG+ L D K +  RI   ++ SLNI P
Sbjct:  562 GYEVIYLTEPVDEYCIQALPEFDGKRFQNVAKEGVKFDESEKSKESREAVEKEFEPLLNWMKDKALKDKIEKAVVSQRLTESPCALVASQYGWSGNMERIMKAQAYQTGKDISTNYYASQKKTFEINPRHPLIRDMLRRVKEDEDDKTVSDLAVVLFETATLRSGYLLPDTKAYGDRIERMLRLSLNIDP 751          
BLAST of CK933992 vs. ExPASy Swiss-Prot
Match: HS90A_CRIGR (Heat shock protein HSP 90-alpha OS=Cricetulus griseus GN=HSP90AA1 PE=2 SV=2)

HSP 1 Score: 164.081 bits (414), Expect = 9.876e-40
Identity = 87/185 (47.03%), Postives = 119/185 (64.32%), Query Frame = 2
Query:    2 GYEVIFFTDPVDEYLMQYLMDYEDKKFQNVSKEGLKLGKDTKDK----ELKESFKELTKWWKGALASENVDDVKVSNRLDNTPCVVVTSKYGWSANMERIMQSQTLSDASKQAYMRGKRVLEINPRHPIIKELRERVVKDPEDAGVQQTAQLIYQTALMESGFSLNDPKDFASRIYSTVKSSLNI 544
            G EVI+  +P+DEY +Q L ++E K   +V+KEGL+L +D ++K    E K  F+ L K  K  L  + V+ V VSNRL  +PC +VTS YGW+ANMERI+++Q L D S   YM  K+ LEINP H II+ LR++   D  D  V+    L+Y+TAL+ SGFSL DP+  A+RIY  +K  L I
Sbjct:  516 GLEVIYMIEPIDEYCVQQLKEFEGKTLVSVTKEGLELPEDEEEKKKQEEKKTKFENLCKIMKDIL-EKKVEKVVVSNRLVTSPCCIVTSTYGWTANMERIIKAQALRDNSTMGYMAAKKHLEINPDHSIIETLRQKAEADKNDKSVKDLVILLYETALLSSGFSLEDPQTHANRIYRMIKLGLGI 699          
BLAST of CK933992 vs. ExPASy Swiss-Prot
Match: ENPL_PIG (Endoplasmin OS=Sus scrofa GN=HSP90B1 PE=2 SV=3)

HSP 1 Score: 164.081 bits (414), Expect = 9.876e-40
Identity = 82/190 (43.16%), Postives = 119/190 (62.63%), Query Frame = 2
Query:    2 GYEVIFFTDPVDEYLMQYLMDYEDKKFQNVSKEGLKLGKDTKDKELKES----FKELTKWWKGALASENVDDVKVSNRLDNTPCVVVTSKYGWSANMERIMQSQ---TLSDASKQAYMRGKRVLEINPRHPIIKELRERVVKDPEDAGVQQTAQLIYQTALMESGFSLNDPKDFASRIYSTVKSSLNISP 550
            GYEVI+ T+PVDEY +Q L +++ K+FQNV+KEG+K  +  K KE +E+    F+ L  W K     + ++   VS RL  +PC +V S+YGWS NMERIM++Q   T  D S   Y   K+  EINPRHP+I+++  RV +D +D  V   A ++++TA + SG+ L D K +  RI   ++ SLNI P
Sbjct:  562 GYEVIYLTEPVDEYCIQALPEFDGKRFQNVAKEGVKFDESEKSKENREAVEKEFEPLLNWMKDKALKDKIEKAVVSQRLTESPCALVASQYGWSGNMERIMKAQAYQTGKDISTNYYASQKKTFEINPRHPLIRDMLRRVKEDEDDKTVSDLAVVLFETATLRSGYLLPDTKAYGDRIERMLRLSLNIDP 751          
BLAST of CK933992 vs. ExPASy Swiss-Prot
Match: ENPL_MOUSE (Endoplasmin OS=Mus musculus GN=Hsp90b1 PE=1 SV=2)

HSP 1 Score: 163.696 bits (413), Expect = 1.290e-39
Identity = 81/190 (42.63%), Postives = 119/190 (62.63%), Query Frame = 2
Query:    2 GYEVIFFTDPVDEYLMQYLMDYEDKKFQNVSKEGLKLGKDTKDKELKES----FKELTKWWKGALASENVDDVKVSNRLDNTPCVVVTSKYGWSANMERIMQSQ---TLSDASKQAYMRGKRVLEINPRHPIIKELRERVVKDPEDAGVQQTAQLIYQTALMESGFSLNDPKDFASRIYSTVKSSLNISP 550
            GYEVI+ T+PVDEY +Q L +++ K+FQNV+KEG+K  +  K KE +E+    F+ L  W K     + ++   VS RL  +PC +V S+YGWS NMERIM++Q   T  D S   Y   K+  EINPRHP+I+++  R+ +D +D  V   A ++++TA + SG+ L D K +  RI   ++ SLNI P
Sbjct:  562 GYEVIYLTEPVDEYCIQALPEFDGKRFQNVAKEGVKFDESEKTKESREATEKEFEPLLNWMKDKALKDKIEKAVVSQRLTESPCALVASQYGWSGNMERIMKAQAYQTGKDISTNYYASQKKTFEINPRHPLIRDMLRRIKEDEDDKTVMDLAVVLFETATLRSGYLLPDTKAYGDRIERMLRLSLNIDP 751          
The following BLAST results are available for this feature:
BLAST of CK933992 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 315
Match NameE-valueIdentityDescription
HS90A_BOVIN3.394e-4047.57Heat shock protein HSP 90-alpha OS=Bos taurus GN=H... [more]
H90B3_HUMAN3.394e-4044.81Putative heat shock protein HSP 90-beta-3 OS=Homo ... [more]
ENPL_CANFA4.433e-4043.68Endoplasmin OS=Canis familiaris GN=HSP90B1 PE=1 SV... [more]
HSP83_LEIIN5.790e-4044.86Heat shock protein 83-1 OS=Leishmania infantum GN=... [more]
ENPL_RAT7.562e-4043.16Endoplasmin OS=Rattus norvegicus GN=Hsp90b1 PE=1 S... [more]
ENPL_MESAU7.562e-4043.68Endoplasmin (Fragment) OS=Mesocricetus auratus GN=... [more]
ENPL_BOVIN7.562e-4043.16Endoplasmin OS=Bos taurus GN=HSP90B1 PE=2 SV=1[more]
HS90A_CRIGR9.876e-4047.03Heat shock protein HSP 90-alpha OS=Cricetulus gris... [more]
ENPL_PIG9.876e-4043.16Endoplasmin OS=Sus scrofa GN=HSP90B1 PE=2 SV=3[more]
ENPL_MOUSE1.290e-3942.63Endoplasmin OS=Mus musculus GN=Hsp90b1 PE=1 SV=2[more]

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Properties
Property NameValue
Genbank descriptionCGF1004542_G03 Developing fruit peel at 38 DAFB Citrus sinensis cDNA clone P38DAB10001_IVF_G03 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK933992 ID=CK933992; Name=CK933992; organism=Citrus sinensis; type=EST; length=894bp
GGGCTATGAGGTGATTTTCTTCACTGATCCAGTTGATGAATACCTGATGC
AATACCTGATGGATTATGAAGACAAAAAGTTCCAAAATGTATCTAAAGAG
GGTCTTAAACTTGGTAAAGACACTAAAGATAAGGAACTTAAGGAGTCATT
CAAGGAGCTCACGAAATGGTGGAAGGGTGCTCTTGCCAGCGAGAACGTGG
ATGATGTGAAAGTAAGCAACCGCTTGGATAACACCCCTTGCGTAGTTGTG
ACATCAAAGTATGGTTGGAGTGCGAATATGGAGAGGATCATGCAGTCTCA
GACTCTCTCAGATGCTAGCAAGCAAGCATATATGCGGGGCAAGAGGGTGC
TTGAAATCAATCCAAGGCATCCAATCATCAAAGAGCTCCGGGAGAGAGTC
GTCAAGGACCCTGAGGATGCGGGTGTCCAGCAAACAGCCCAACTCATTTA
CCAGACGGCACTCATGGAGAGTGGCTTTTCGCTCAATGATCCCAAGGATT
TTGCCTCCCGAATTTACAGCACGGTGAAATCTAGCCTTAACATTAGCCCT
GATGCAGCTGTTGAGGAGGAAGATGATGTAGAAGAGACTGATGCTGACAC
TGAAATGAAAGAATCTTCGGCTGCCAAAGAGGACGTGGATACAGAGTATT
CTGGCAAGGATGAGTTGTAGATTGCCTAATAAAAGCATGGGCAACAACAT
CCCAGTTTCTTAGGAAAGCATAAACGCTCTGCATAGTGCGTTCATTTCCA
GTTTTGAAAACTTTGGTGAAAAAACGTTTTAGATCTTAGATTCAATGTAA
CCATAATCACCGGGAATTTTGTCTTTTAACAGTTGACACTATCAATTATG
GATGAATCAGCGTGTCAAAAAAAAAAAAAAAAAAAAAAAAAAAA
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