CK933992

Overview
NameCK933992
Unique NameCK933992
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length894
Libraries
Library NameType
Developing fruit peel at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
CK933992_ssr317 microsatellite CK933992_ssr317:317..328. BLAST: Citrus ESTs to Prunus persica proteins V1
Csv1_Contig8273 contig Csv1_Contig8273:1851..2742. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CK933992 vs. ExPASy Swiss-Prot
Match: HSP90_THEPA (Heat shock protein 90 OS=Theileria parva GN=TP02_0244 PE=2 SV=2)

HSP 1 Score: 161.77 bits (408), Expect = 4.901e-39
Identity = 81/184 (44.02%), Postives = 120/184 (65.22%), Query Frame = 2
Query:    5 YEVIFFTDPVDEYLMQYLMDYEDKKFQNVSKEGLKLGKDTKDKE----LKESFKELTKWWKGALASENVDDVKVSNRLDNTPCVVVTSKYGWSANMERIMQSQTLSDASKQAYMRGKRVLEINPRHPIIKELRERVVKDPEDAGVQQTAQLIYQTALMESGFSLNDPKDFASRIYSTVKSSLNI 544
            YEV++ TDP+DEY +Q + ++E KK +  +KEGL L +   +K+    LKE  + L K  K  L  + V+ V    R  ++PC +VTS++GWSANMERIM++Q L D+S  +YM  K+++EINPRH I+KEL+ R   D  D  V+    L+Y TAL+ SGF+L++P  F +RIY  +K  L++
Sbjct:  511 YEVLYMTDPIDEYAVQQIKEFEGKKLKCCTKEGLDLDEGEDEKKSFEALKEEMEPLCKHIKEVL-HDKVEKVVCGTRFTDSPCALVTSEFGWSANMERIMKAQALRDSSITSYMLSKKIMEINPRHSIMKELKTRAANDKTDKTVKDLVWLLYDTALLTSGFNLDEPTQFGNRIYRMIKLGLSL 693          
BLAST of CK933992 vs. ExPASy Swiss-Prot
Match: HSP83_LEIAM (Heat shock protein 83 OS=Leishmania amazonensis GN=HSP83 PE=3 SV=1)

HSP 1 Score: 161.77 bits (408), Expect = 4.901e-39
Identity = 82/185 (44.32%), Postives = 122/185 (65.95%), Query Frame = 2
Query:    2 GYEVIFFTDPVDEYLMQYLMDYEDKKFQNVSKEGLKLGKDTKDKELKESFK----ELTKWWKGALASENVDDVKVSNRLDNTPCVVVTSKYGWSANMERIMQSQTLSDASKQAYMRGKRVLEINPRHPIIKELRERVVKDPEDAGVQQTAQLIYQTALMESGFSLNDPKDFASRIYSTVKSSLNI 544
            G+EV+F T+P DEY+MQ + D+EDKKF  ++KEG+   +  ++K  +E  K    +L K  K  L  + V+ V VS RL  +PC++VTS++GWSA+ME++M++Q L D+S   YM  K+ +E+NP+HPIIKELR RV  D  D  V+    L++ T+L+ SGF L DP  +A RI   +K  L++
Sbjct:  487 GFEVLFMTEPYDEYVMQQVKDFEDKKFACLTKEGVHFEESEEEKRQREEEKATCEKLCKTMKEVLG-DKVEKVTVSERLSTSPCILVTSEFGWSAHMEQMMRNQALRDSSMAQYMMSKKTMELNPKHPIIKELRRRVEADENDKAVKDLVFLLFDTSLLTSGFQLEDP-TYAERINRMIKLGLSL 669          
BLAST of CK933992 vs. ExPASy Swiss-Prot
Match: HSC90_DICDI (Heat shock cognate 90 kDa protein OS=Dictyostelium discoideum GN=hspD PE=1 SV=2)

HSP 1 Score: 161.77 bits (408), Expect = 4.901e-39
Identity = 84/183 (45.90%), Postives = 123/183 (67.21%), Query Frame = 2
Query:    8 EVIFFTDPVDEYLMQYLMDYEDKKFQNVSKEGLKLGKDTKDKELKESFK----ELTKWWKGALASENVDDVKVSNRLDNTPCVVVTSKYGWSANMERIMQSQTLSDASKQAYMRGKRVLEINPRHPIIKELRERVVKDPEDAGVQQTAQLIYQTALMESGFSLNDPKDFASRIYSTVKSSLNI 544
            EVI+  DP+DEY +Q L +Y+ KK  +++KEGLKL +   +K+  E  K    EL K  K  L  + V+ V +S RL N+PCV+VTS+YGWSANMERIM++Q L D+S  +YM  K+ LE+NP HPI+++L ++  +  +    +    L+Y+TAL+ SGFSL++P  FASRI+  +K  L+I
Sbjct:  485 EVIYMCDPIDEYAVQQLKEYDGKKLVSITKEGLKLDETEDEKKKAEQDKAANEELLKQVKDVLG-DKVEKVVLSTRLANSPCVLVTSEYGWSANMERIMKAQALRDSSMSSYMSSKKTLELNPDHPIVRDLAKKAAE--KSKTFKDFVYLLYETALLTSGFSLDEPSSFASRIHRMIKLGLSI 664          
BLAST of CK933992 vs. ExPASy Swiss-Prot
Match: HSP83_IPONI (Heat shock protein 83 OS=Ipomoea nil GN=HSP83A PE=2 SV=1)

HSP 1 Score: 161.384 bits (407), Expect = 6.401e-39
Identity = 83/186 (44.62%), Postives = 124/186 (66.67%), Query Frame = 2
Query:    2 GYEVIFFTDPVDEYLMQYLMDYEDKKFQNVSKEGLKLGKDTKDK-----ELKESFKELTKWWKGALASENVDDVKVSNRLDNTPCVVVTSKYGWSANMERIMQSQTLSDASKQAYMRGKRVLEINPRHPIIKELRERVVKDPEDAGVQQTAQLIYQTALMESGFSLNDPKDFASRIYSTVKSSLNI 544
            GYEV+F  D +DEY +  L +Y+ KK  + +KEGLKL  D +++     E K+SF+ L K  K  L  + V+ V VS+R+ ++PC +VT +YGW+ANMERIM++Q L D+S  +YM  K+ +EINP + I++ELR+R   D  D  V+    L+++TAL+ SGFSL+DP  F +RI+  +K  L+I
Sbjct:  491 GYEVLFMVDAIDEYAVGQLKEYDGKKLVSATKEGLKLEDDDEEEKKKREEKKKSFENLCKIIKDILG-DKVEKVVVSDRIVDSPCCLVTGEYGWTANMERIMKAQALRDSSMSSYMSSKKTMEINPDNGIMEELRKRAEADKNDKSVKDLVLLLFETALLTSGFSLDDPNTFGARIHRMLKLGLSI 675          
BLAST of CK933992 vs. ExPASy Swiss-Prot
Match: ENPL_CHICK (Endoplasmin OS=Gallus gallus GN=HSP90B1 PE=1 SV=1)

HSP 1 Score: 161.384 bits (407), Expect = 6.401e-39
Identity = 80/188 (42.55%), Postives = 119/188 (63.30%), Query Frame = 2
Query:    2 GYEVIFFTDPVDEYLMQYLMDYEDKKFQNVSKEGLKLGKDTKDKELKES----FKELTKWWKGALASENVDDVKVSNRLDNTPCVVVTSKYGWSANMERIMQSQ---TLSDASKQAYMRGKRVLEINPRHPIIKELRERVVKDPEDAGVQQTAQLIYQTALMESGFSLNDPKDFASRIYSTVKSSLNI 544
            GYEVI+ T+PVDEY +Q L +++ K+FQNV+KEG+K  +  K KE +E+    F+ L  W K     + ++   +S RL  +PC +V S+YGWS NMERIM++Q   T  D S   Y   K+  EINPRHP+IK++  RV ++ +D  V   A ++++TA + SG+ L D K++  RI   ++ SLNI
Sbjct:  561 GYEVIYLTEPVDEYCIQALPEFDGKRFQNVAKEGVKFEESEKSKESREALEKEFEPLLNWMKDKALKDKIEKAVLSQRLTQSPCALVASQYGWSGNMERIMKAQAYQTGKDISTNYYASQKKTFEINPRHPLIKDMLRRVKENEDDKTVSDLAVVLFETATLRSGYMLPDTKEYGDRIERMLRLSLNI 748          
BLAST of CK933992 vs. ExPASy Swiss-Prot
Match: HSP83_ORYSJ (Heat shock protein 81-3 OS=Oryza sativa subsp. japonica GN=HSP81-3 PE=2 SV=2)

HSP 1 Score: 160.614 bits (405), Expect = 1.092e-38
Identity = 83/185 (44.86%), Postives = 120/185 (64.86%), Query Frame = 2
Query:    2 GYEVIFFTDPVDEYLMQYLMDYEDKKFQNVSKEGLKLGKDTKDK----ELKESFKELTKWWKGALASENVDDVKVSNRLDNTPCVVVTSKYGWSANMERIMQSQTLSDASKQAYMRGKRVLEINPRHPIIKELRERVVKDPEDAGVQQTAQLIYQTALMESGFSLNDPKDFASRIYSTVKSSLNI 544
            GYEV++  D +DEY +  L ++E KK  + +KEGLKL +   +K    ELKE F+ L K  K  L  + V+ V VS+R+ ++PC +VT +YGW+ANMERIM++Q L D+S   YM  K+ +EINP + I+ ELR+R   D  D  V+    L+++TAL+ SGFSL DP  F +RI+  +K  L+I
Sbjct:  488 GYEVLYMVDAIDEYAVGQLKEFEGKKLVSATKEGLKLDESEDEKKRQEELKEKFEGLCKVIKEVLG-DKVEKVVVSDRVVDSPCCLVTGEYGWTANMERIMKAQALRDSSMAGYMSSKKTMEINPENAIMDELRKRADADKNDKSVKDLVMLLFETALLTSGFSLEDPNTFGTRIHRMLKLGLSI 671          
BLAST of CK933992 vs. ExPASy Swiss-Prot
Match: HSP82_ORYSJ (Heat shock protein 81-2 OS=Oryza sativa subsp. japonica GN=HSP81-2 PE=2 SV=1)

HSP 1 Score: 160.614 bits (405), Expect = 1.092e-38
Identity = 83/185 (44.86%), Postives = 120/185 (64.86%), Query Frame = 2
Query:    2 GYEVIFFTDPVDEYLMQYLMDYEDKKFQNVSKEGLKLGKDTKDK----ELKESFKELTKWWKGALASENVDDVKVSNRLDNTPCVVVTSKYGWSANMERIMQSQTLSDASKQAYMRGKRVLEINPRHPIIKELRERVVKDPEDAGVQQTAQLIYQTALMESGFSLNDPKDFASRIYSTVKSSLNI 544
            GYEV++  D +DEY +  L ++E KK  + +KEGLKL +   +K    ELKE F+ L K  K  L  + V+ V VS+R+ ++PC +VT +YGW+ANMERIM++Q L D+S   YM  K+ +EINP + I+ ELR+R   D  D  V+    L+++TAL+ SGFSL DP  F +RI+  +K  L+I
Sbjct:  488 GYEVLYMVDAIDEYAVGQLKEFEGKKLVSATKEGLKLDESEDEKKRQEELKEKFEGLCKVIKEVLG-DKVEKVVVSDRVVDSPCCLVTGEYGWTANMERIMKAQALRDSSMAGYMSSKKTMEINPENSIMDELRKRADADKNDKSVKDLVMLLFETALLTSGFSLEDPNTFGTRIHRMLKLGLSI 671          
BLAST of CK933992 vs. ExPASy Swiss-Prot
Match: HSP90_EIMTE (Heat shock protein 90 OS=Eimeria tenella GN=HSP90 PE=2 SV=1)

HSP 1 Score: 160.229 bits (404), Expect = 1.426e-38
Identity = 80/185 (43.24%), Postives = 123/185 (66.49%), Query Frame = 2
Query:    2 GYEVIFFTDPVDEYLMQYLMDYEDKKFQNVSKEGLKLGKDTKDK----ELKESFKELTKWWKGALASENVDDVKVSNRLDNTPCVVVTSKYGWSANMERIMQSQTLSDASKQAYMRGKRVLEINPRHPIIKELRERVVKDPEDAGVQQTAQLIYQTALMESGFSLNDPKDFASRIYSTVKSSLNI 544
            GYEV++ TDP+DEY +Q L ++++ K +  +KEGL++ +  ++K    ELK  F+ L K  K  L  + VD V +SNR+ ++PCV+VT+++GWSANMERIM++Q L D S  +YM  K+ +E+N  H I+ E++ +   D  D  V+    L+Y TAL+ SGFSL +P  FA+RI+  +K  L+I
Sbjct:  499 GYEVLYMTDPIDEYAVQQLKEFDNHKLRCCTKEGLEIDESEEEKKKFEELKAEFEPLLKLIKEVL-HDKVDKVVLSNRITDSPCVLVTTEFGWSANMERIMKAQALRDNSMTSYMVSKKTMEVNGHHSIMIEIKNKAAVDKSDKTVKDLIWLLYDTALLTSGFSLEEPTQFAARIHRMIKLGLSI 682          
BLAST of CK933992 vs. ExPASy Swiss-Prot
Match: HSP80_SOLLC (Heat shock cognate protein 80 OS=Solanum lycopersicum GN=HSC80 PE=2 SV=1)

HSP 1 Score: 158.688 bits (400), Expect = 4.149e-38
Identity = 82/185 (44.32%), Postives = 120/185 (64.86%), Query Frame = 2
Query:    2 GYEVIFFTDPVDEYLMQYLMDYEDKKFQNVSKEGLKLGKDTKDK----ELKESFKELTKWWKGALASENVDDVKVSNRLDNTPCVVVTSKYGWSANMERIMQSQTLSDASKQAYMRGKRVLEINPRHPIIKELRERVVKDPEDAGVQQTAQLIYQTALMESGFSLNDPKDFASRIYSTVKSSLNI 544
            GYEV++  D +DEY +  L ++E KK  + +KEGLKL +   +K    ELKE F+ L K  K  L  + V+ V VS+R+ ++PC +VT +YGW+ANMERIM++Q L D+S   YM  K+ +EINP + I+ ELR+R   D  D  V+    L+++TAL+ SGFSL +P  F +RI+  +K  L+I
Sbjct:  486 GYEVLYMVDAIDEYSIGQLKEFEGKKLVSATKEGLKLDESEDEKKKQEELKEKFEGLCKVMKDVLG-DKVEKVIVSDRVVDSPCCLVTGEYGWTANMERIMKAQALRDSSMAGYMSSKKTMEINPENSIMDELRKRADADKNDKSVKDLVLLLFETALLTSGFSLEEPNTFGNRIHRMLKLGLSI 669          
BLAST of CK933992 vs. ExPASy Swiss-Prot
Match: HSP82_ARATH (Heat shock protein 81-2 OS=Arabidopsis thaliana GN=HSP81-2 PE=1 SV=1)

HSP 1 Score: 156.377 bits (394), Expect = 2.059e-37
Identity = 82/185 (44.32%), Postives = 120/185 (64.86%), Query Frame = 2
Query:    2 GYEVIFFTDPVDEYLMQYLMDYEDKKFQNVSKEGLKLGKDTKDK----ELKESFKELTKWWKGALASENVDDVKVSNRLDNTPCVVVTSKYGWSANMERIMQSQTLSDASKQAYMRGKRVLEINPRHPIIKELRERVVKDPEDAGVQQTAQLIYQTALMESGFSLNDPKDFASRIYSTVKSSLNI 544
            G EV++  D +DEY +  L ++E KK  + +KEGLKL +   +K    ELKE F+ L K  K  L  + V+ V VS+R+ ++PC +VT +YGW+ANMERIM++Q L D+S   YM  K+ +EINP + I+ ELR+R   D  D  V+    L+++TAL+ SGFSL++P  F SRI+  +K  L+I
Sbjct:  486 GIEVLYMVDAIDEYAIGQLKEFEGKKLVSATKEGLKLDETEDEKKKKEELKEKFEGLCKVIKDVLG-DKVEKVIVSDRVVDSPCCLVTGEYGWTANMERIMKAQALRDSSMAGYMSSKKTMEINPENSIMDELRKRADADKNDKSVKDLVLLLFETALLTSGFSLDEPNTFGSRIHRMLKLGLSI 669          
The following BLAST results are available for this feature:
BLAST of CK933992 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 315
Match NameE-valueIdentityDescription
HSP90_THEPA4.901e-3944.02Heat shock protein 90 OS=Theileria parva GN=TP02_0... [more]
HSP83_LEIAM4.901e-3944.32Heat shock protein 83 OS=Leishmania amazonensis GN... [more]
HSC90_DICDI4.901e-3945.90Heat shock cognate 90 kDa protein OS=Dictyostelium... [more]
HSP83_IPONI6.401e-3944.62Heat shock protein 83 OS=Ipomoea nil GN=HSP83A PE=... [more]
ENPL_CHICK6.401e-3942.55Endoplasmin OS=Gallus gallus GN=HSP90B1 PE=1 SV=1[more]
HSP83_ORYSJ1.092e-3844.86Heat shock protein 81-3 OS=Oryza sativa subsp. jap... [more]
HSP82_ORYSJ1.092e-3844.86Heat shock protein 81-2 OS=Oryza sativa subsp. jap... [more]
HSP90_EIMTE1.426e-3843.24Heat shock protein 90 OS=Eimeria tenella GN=HSP90 ... [more]
HSP80_SOLLC4.149e-3844.32Heat shock cognate protein 80 OS=Solanum lycopersi... [more]
HSP82_ARATH2.059e-3744.32Heat shock protein 81-2 OS=Arabidopsis thaliana GN... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004542_G03 Developing fruit peel at 38 DAFB Citrus sinensis cDNA clone P38DAB10001_IVF_G03 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK933992 ID=CK933992; Name=CK933992; organism=Citrus sinensis; type=EST; length=894bp
GGGCTATGAGGTGATTTTCTTCACTGATCCAGTTGATGAATACCTGATGC
AATACCTGATGGATTATGAAGACAAAAAGTTCCAAAATGTATCTAAAGAG
GGTCTTAAACTTGGTAAAGACACTAAAGATAAGGAACTTAAGGAGTCATT
CAAGGAGCTCACGAAATGGTGGAAGGGTGCTCTTGCCAGCGAGAACGTGG
ATGATGTGAAAGTAAGCAACCGCTTGGATAACACCCCTTGCGTAGTTGTG
ACATCAAAGTATGGTTGGAGTGCGAATATGGAGAGGATCATGCAGTCTCA
GACTCTCTCAGATGCTAGCAAGCAAGCATATATGCGGGGCAAGAGGGTGC
TTGAAATCAATCCAAGGCATCCAATCATCAAAGAGCTCCGGGAGAGAGTC
GTCAAGGACCCTGAGGATGCGGGTGTCCAGCAAACAGCCCAACTCATTTA
CCAGACGGCACTCATGGAGAGTGGCTTTTCGCTCAATGATCCCAAGGATT
TTGCCTCCCGAATTTACAGCACGGTGAAATCTAGCCTTAACATTAGCCCT
GATGCAGCTGTTGAGGAGGAAGATGATGTAGAAGAGACTGATGCTGACAC
TGAAATGAAAGAATCTTCGGCTGCCAAAGAGGACGTGGATACAGAGTATT
CTGGCAAGGATGAGTTGTAGATTGCCTAATAAAAGCATGGGCAACAACAT
CCCAGTTTCTTAGGAAAGCATAAACGCTCTGCATAGTGCGTTCATTTCCA
GTTTTGAAAACTTTGGTGAAAAAACGTTTTAGATCTTAGATTCAATGTAA
CCATAATCACCGGGAATTTTGTCTTTTAACAGTTGACACTATCAATTATG
GATGAATCAGCGTGTCAAAAAAAAAAAAAAAAAAAAAAAAAAAA
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