CK933992

Overview
NameCK933992
Unique NameCK933992
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length894
Libraries
Library NameType
Developing fruit peel at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
CK933992_ssr317 microsatellite CK933992_ssr317:317..328. BLAST: Citrus ESTs to Prunus persica proteins V1
Csv1_Contig8273 contig Csv1_Contig8273:1851..2742. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CK933992 vs. ExPASy Swiss-Prot
Match: ENPL_DICDI (Endoplasmin homolog OS=Dictyostelium discoideum GN=grp94 PE=2 SV=2)

HSP 1 Score: 124.02 bits (310), Expect = 1.133e-27
Identity = 66/178 (37.08%), Postives = 115/178 (64.61%), Query Frame = 2
Query:    2 GYEVIFFTDPVDEYLMQYLMDYEDK-KFQNVSKEGLKLGKDTKD----KELKESFKELTKWWKGALASENVDDVKVSNRLDNTPCVVVTSKYGWSANMERIMQSQTLSDASKQAYMRGKRVLEINPRHPIIKELRERVVK-DPEDAGVQQTAQLIYQTALMESGFSLNDPKDFASRIY 517
            GYEV+F  DP+DEYL+  L  ++DK KF N+++ G+K  +D ++    K+  E FK L  + K  L S+ ++ V +S  L ++P ++V++ +G +AN ERIM++Q    A+ Q     K+++EINP HP+IK+L  R+ +   ED   + +A ++Y+T+ + +G+S+++P +FA  IY
Sbjct:  542 GYEVLFLVDPIDEYLVPQLDKFDDKYKFTNLARSGVKFNEDKEEEDQRKQTAEEFKPLLSYLKKTL-SDKLEKVVISKVLADSPSILVSNSWGVTANQERIMKAQA-HQANAQPQFNSKKIMEINPSHPLIKKLLNRLNEFGEEDETTKVSAHVLYETSALTAGYSIDNPTNFADFIY 717          
BLAST of CK933992 vs. ExPASy Swiss-Prot
Match: HS904_HUMAN (Putative heat shock protein HSP 90-alpha A4 OS=Homo sapiens GN=HSP90AA4P PE=5 SV=1)

HSP 1 Score: 122.094 bits (305), Expect = 4.304e-27
Identity = 70/179 (39.11%), Postives = 100/179 (55.87%), Query Frame = 2
Query:    2 GYEVIFFTDPVDEYLMQYLMDYEDKKFQNVSKEGLKLGKDTKDKELKESFKELTKWWKGALASENVDDVKVSNRLDNTPCVVVTSKYGWSANMERIMQSQTLSDASKQAYMRGKRVLEINPRHPIIKELRERVVKDPEDAGVQQTAQLIYQTALMESGFSLNDPKDFASRIYSTVKSSL 538
            G EVI+  +P+DEY +Q L ++E K   +V+KE L+L +D ++K+ +E  K+ TK  K          ++ S +          S YGW+ANMERIM++Q L D S   YM  K+ LEINP H  I  LR++   D  D  V+    L+Y+TAL+ S F L  P+  A+RIY   K  L
Sbjct:  223 GLEVIYTIEPIDEYCVQQLKEFEGKTLVSVTKEDLELPEDEEEKKKQEEGKQKTKQKKN-------QSLRTSAK----------STYGWTANMERIMKAQALRDNSTTGYMAAKKHLEINPDHSFIDTLRQKAETDKNDKSVKDLVILLYETALLSSDFGLEGPQTHANRIYRMNKLGL 384          
BLAST of CK933992 vs. ExPASy Swiss-Prot
Match: ENPLL_HUMAN (Putative endoplasmin-like protein OS=Homo sapiens GN=HSP90B2P PE=5 SV=1)

HSP 1 Score: 118.242 bits (295), Expect = 6.215e-26
Identity = 61/153 (39.87%), Postives = 91/153 (59.48%), Query Frame = 2
Query:    2 GYEVIFFTDPVDEYLMQYLMDYEDKKFQNVSKEGLKLGKDTKDKE----LKESFKELTKWWKGALASENVDDVKVSNRLDNTPCVVVTSKYGWSANMERIMQS---QTLSDASKQAYMRGKRVLEINPRHPIIKELRERVVKDPEDAGVQQTA 439
            GYEVI+ T+PV EY +Q L +++ K+FQNV+KEG+K     K KE    +++ F+ L  W K     + ++   VS  L  + C +V S+YGWS NMERIM++   QT    S   +   K+  EINPRHP+I+++  R+ +D +D  V   A
Sbjct:  201 GYEVIYLTEPVVEYCIQALPEFDGKRFQNVAKEGVKFDDSEKTKESHEAVEKEFEPLPNWVKDKAIKDKIEKAMVSQCLTESLCALVASQYGWSGNMERIMKAQAYQTGKGISTNYHASRKKTFEINPRHPLIRDMLRRIKEDEDDKTVLDLA 353          
BLAST of CK933992 vs. ExPASy Swiss-Prot
Match: HTPG_PELPD (Chaperone protein htpG OS=Pelobacter propionicus (strain DSM 2379) GN=htpG PE=3 SV=1)

HSP 1 Score: 116.316 bits (290), Expect = 2.362e-25
Identity = 67/174 (38.51%), Postives = 102/174 (58.62%), Query Frame = 2
Query:    2 GYEVIFFTDPVDEYLMQYLMDYEDKKFQNVSK-------EGLKLGKDTKDKELKESFKELTKWWKGALASENVDDVKVSNRLDNTPCVVVTSKYGWSANMERIMQSQTLSDASKQAYMRGKRVLEINPRHPIIKELRERVVKDPEDAGVQQTAQLIYQTALMESGFSLNDPKDF 502
            GYEV+F TDPVDE+++Q L +Y++KK + V +       E  K  K+TK +E ++ + +L  + K  L  + V D ++S RL ++ C +V  +YG +ANMERI++      A  Q     KRVLE+NP HPI+K + E   ++ EDA +   A L+Y  AL+  G  + DP  F
Sbjct:  465 GYEVLFLTDPVDEWVVQALTEYKEKKLKAVDRGDVDLDSEEEKKEKETKQEEARKEYGDLISFIKSHL-EDRVKDARLSKRLTDSACCLVADEYGINANMERILK------AMNQPVPDSKRVLELNPDHPIMKIMTEIFRENKEDARLTDYADLLYDQALLTEGSPIKDPLRF 631          
BLAST of CK933992 vs. ExPASy Swiss-Prot
Match: HTPG_MYCA1 (Chaperone protein htpG OS=Mycobacterium avium (strain 104) GN=htpG PE=3 SV=1)

HSP 1 Score: 109.768 bits (273), Expect = 2.210e-23
Identity = 60/173 (34.68%), Postives = 104/173 (60.12%), Query Frame = 2
Query:    2 GYEVIFFTDPVDEYLMQYLMDYEDKKFQNVSKEGLKLGKDTKD-----KELKESFKELTKWWKGALASENVDDVKVSNRLDNTPCVVVTSKYGWSANMERIMQSQTLSDASKQAYMRGKRVLEINPRHPIIKELRERVVKDPEDAGVQQTAQLIYQTALMESGFSLNDPKDFA 505
            GYEV+  TDPVDE  +  + +++ K  Q+++K  + L  + ++     +E ++ F +L  W K  L S++V +V++SNRL ++P  ++T  +G +  + R+ +      AS Q    GKR+LE+NP+HP++  LR+      +D  V +TA+L+Y TAL+  G +L+DP  FA
Sbjct:  468 GYEVLLLTDPVDEVWVGTVTEFDGKPLQSIAKGEVDLSAEGEESQAEREEQQKEFADLLAWLKDTL-SDHVKEVRLSNRLTDSPACLITDAFGITPALARLYR------ASGQDIPVGKRILELNPKHPLVTGLRQAHQDRADDPSVAETAELLYGTALLAEGGALDDPARFA 633          
BLAST of CK933992 vs. ExPASy Swiss-Prot
Match: HTPG_MYCPA (Chaperone protein htpG OS=Mycobacterium paratuberculosis GN=htpG PE=3 SV=1)

HSP 1 Score: 109.383 bits (272), Expect = 2.887e-23
Identity = 60/173 (34.68%), Postives = 103/173 (59.54%), Query Frame = 2
Query:    2 GYEVIFFTDPVDEYLMQYLMDYEDKKFQNVSKEGLKLGKDTKDK-----ELKESFKELTKWWKGALASENVDDVKVSNRLDNTPCVVVTSKYGWSANMERIMQSQTLSDASKQAYMRGKRVLEINPRHPIIKELRERVVKDPEDAGVQQTAQLIYQTALMESGFSLNDPKDFA 505
            GYEV+  TDPVDE  +  + +++ K  Q+++K  + L  + ++      E ++ F +L  W K  L S++V +V++SNRL ++P  ++T  +G +  + R+ +      AS Q    GKR+LE+NP+HP++  LR+      +D  V +TA+L+Y TAL+  G +L+DP  FA
Sbjct:  468 GYEVLLLTDPVDEVWVGTVTEFDGKPLQSIAKGEVDLSAEGEESQAERDEQQKEFADLLAWLKDTL-SDHVKEVRLSNRLTDSPACLITDAFGITPALARLYR------ASGQDIPVGKRILELNPKHPLVTGLRQAHQDRADDPSVAETAELLYGTALLAEGGALDDPARFA 633          
BLAST of CK933992 vs. ExPASy Swiss-Prot
Match: HTPG_GEOUR (Chaperone protein htpG OS=Geobacter uraniireducens (strain Rf4) GN=htpG PE=3 SV=1)

HSP 1 Score: 107.457 bits (267), Expect = 1.097e-22
Identity = 61/173 (35.26%), Postives = 96/173 (55.49%), Query Frame = 2
Query:    2 GYEVIFFTDPVDEYLMQYLMDYEDKKFQNVSKEGLKLGKDTKDKELKESFKELTKWWKGAL------ASENVDDVKVSNRLDNTPCVVVTSKYGWSANMERIMQSQTLSDASKQAYMRGKRVLEINPRHPIIKELRERVVKDPEDAGVQQTAQLIYQTALMESGFSLNDPKDF 502
            G+EV++ TDPVDE+++Q L DY+ KK   V +  L+L    + KE +   +E  K ++G L        + V +V+ S+RL ++ C +V  +YG +ANME+I++      A  Q     KRVLE+NP HP+++ L     KD E+  +     L+Y  AL+  G  + DP  F
Sbjct:  465 GFEVLYMTDPVDEWVVQSLTDYDGKKLHAVDRGDLELDSAEEKKEKEAKQEEAKKQYQGVLDFVKEQLKDKVKEVRFSSRLTDSACCLVADEYGLNANMEKILK------AMNQDVPESKRVLELNPDHPLMQVLSSIFEKDKENPRLADYCGLLYDQALLTEGSPVPDPLRF 631          
BLAST of CK933992 vs. ExPASy Swiss-Prot
Match: HTPG_MYCVP (Chaperone protein htpG OS=Mycobacterium vanbaalenii (strain DSM 7251 / PYR-1) GN=htpG PE=3 SV=1)

HSP 1 Score: 106.686 bits (265), Expect = 1.871e-22
Identity = 64/175 (36.57%), Postives = 101/175 (57.71%), Query Frame = 2
Query:    2 GYEVIFFTDPVDEYLMQYLMDYEDKKFQNVSKEGLKL-------GKDTKDKELKESFKELTKWWKGALASENVDDVKVSNRLDNTPCVVVTSKYGWSANMERIMQSQTLSDASKQAYMRGKRVLEINPRHPIIKELRERVVKDPEDAGVQQTAQLIYQTALMESGFSLNDPKDFA 505
            GYEV+  TDPVDE  ++ + +++ K  Q+V+K  + L       G+D + +E ++ F +L  W K AL S++V +V++S RL ++P  ++T  +G +  + R+ +      AS Q     KR+LE+NP HP+I  LRE       DA +  TA+L+Y TAL+  G  L DP  FA
Sbjct:  469 GYEVLLLTDPVDEVWVESVHEFDGKPLQSVAKGEVDLDSDADNDGQDAERQEREQGFADLIAWLKEAL-SDHVKEVRLSTRLTDSPACLITDTFGITPALARMYR------ASGQPVPVEKRILELNPNHPLITGLREAHKSRGADAELVGTAELLYGTALLAEGGVLEDPARFA 636          
BLAST of CK933992 vs. ExPASy Swiss-Prot
Match: HSP82_AJECA (Heat shock protein 82 OS=Ajellomyces capsulata GN=HSP82 PE=3 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 5.444e-22
Identity = 65/183 (35.52%), Postives = 102/183 (55.74%), Query Frame = 2
Query:    5 YEVIFFTDPVDEYLMQYLMDYEDKKFQNVSK--EGLKLGKDTKDKELKES-FKELTKWWKGALASENVDDVKVSNRLDNTPCVVVTSKYGWSANMERIMQSQTLSDASKQAYMRGKRVLEINPRHPIIKELRERVVKDPEDAGVQQTAQLIYQTALMESGFSLNDPKDFASRIYSTVKSSLNI 544
            +EV+F  DP DEY M  L +++ KK  +++K  E  +  ++ KD+E +E  ++ L K  +  L  + V+ V VS++L  +PC + T ++GWSANMERIM++Q L D S  +  R  R  E N                  D  V+   QL+++T+L+ SGF++ +P  FA RI+  V   LNI
Sbjct:  488 FEVLFLVDPNDEYAMTQLKEFDGKKLVDITKDFELEETEEEKKDREAEEKEYEGLAKSLENILG-DKVEKVVVSHKLIGSPCAIRTGQFGWSANMERIMKAQALRDTSMSS-RRSSRPTEGN------------------DRTVKSITQLLFETSLLVSGFTIEEPSGFAGRIHKLVSLGLNI 650          
BLAST of CK933992 vs. ExPASy Swiss-Prot
Match: HTPG_GEOSL (Chaperone protein htpG OS=Geobacter sulfurreducens GN=htpG PE=3 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 1.584e-21
Identity = 62/174 (35.63%), Postives = 97/174 (55.75%), Query Frame = 2
Query:    2 GYEVIFFTDPVDEYLMQYLMDYEDKKFQNVSK-------EGLKLGKDTKDKELKESFKELTKWWKGALASENVDDVKVSNRLDNTPCVVVTSKYGWSANMERIMQSQTLSDASKQAYMRGKRVLEINPRHPIIKELRERVVKDPEDAGVQQTAQLIYQTALMESGFSLNDPKDF 502
            GYEV+F TDPVDE+++Q L +Y  KK + V +       E  K  ++ K +E  + + +L  + K  LA E V +V++SNRL ++ C +V  ++G +ANMERI++      A  Q     KR+LE+NP HPI++ +     KD  +  +     L+Y  AL+  G  + DP  F
Sbjct:  466 GYEVLFLTDPVDEWVVQGLPEYGGKKLKAVDRGDVIPATEEEKKEQEAKREEAAKQYGDLLSFVKEKLA-ERVKEVRLSNRLTDSACCLVADEHGLNANMERILR------AMNQTVPESKRILELNPDHPIMQVMATLFGKDKTNPRLADYCDLLYDQALLTEGSPIADPLRF 632          
The following BLAST results are available for this feature:
BLAST of CK933992 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 315
Match NameE-valueIdentityDescription
ENPL_DICDI1.133e-2737.08Endoplasmin homolog OS=Dictyostelium discoideum GN... [more]
HS904_HUMAN4.304e-2739.11Putative heat shock protein HSP 90-alpha A4 OS=Hom... [more]
ENPLL_HUMAN6.215e-2639.87Putative endoplasmin-like protein OS=Homo sapiens ... [more]
HTPG_PELPD2.362e-2538.51Chaperone protein htpG OS=Pelobacter propionicus (... [more]
HTPG_MYCA12.210e-2334.68Chaperone protein htpG OS=Mycobacterium avium (str... [more]
HTPG_MYCPA2.887e-2334.68Chaperone protein htpG OS=Mycobacterium paratuberc... [more]
HTPG_GEOUR1.097e-2235.26Chaperone protein htpG OS=Geobacter uraniireducens... [more]
HTPG_MYCVP1.871e-2236.57Chaperone protein htpG OS=Mycobacterium vanbaaleni... [more]
HSP82_AJECA5.444e-2235.52Heat shock protein 82 OS=Ajellomyces capsulata GN=... [more]
HTPG_GEOSL1.584e-2135.63Chaperone protein htpG OS=Geobacter sulfurreducens... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004542_G03 Developing fruit peel at 38 DAFB Citrus sinensis cDNA clone P38DAB10001_IVF_G03 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK933992 ID=CK933992; Name=CK933992; organism=Citrus sinensis; type=EST; length=894bp
GGGCTATGAGGTGATTTTCTTCACTGATCCAGTTGATGAATACCTGATGC
AATACCTGATGGATTATGAAGACAAAAAGTTCCAAAATGTATCTAAAGAG
GGTCTTAAACTTGGTAAAGACACTAAAGATAAGGAACTTAAGGAGTCATT
CAAGGAGCTCACGAAATGGTGGAAGGGTGCTCTTGCCAGCGAGAACGTGG
ATGATGTGAAAGTAAGCAACCGCTTGGATAACACCCCTTGCGTAGTTGTG
ACATCAAAGTATGGTTGGAGTGCGAATATGGAGAGGATCATGCAGTCTCA
GACTCTCTCAGATGCTAGCAAGCAAGCATATATGCGGGGCAAGAGGGTGC
TTGAAATCAATCCAAGGCATCCAATCATCAAAGAGCTCCGGGAGAGAGTC
GTCAAGGACCCTGAGGATGCGGGTGTCCAGCAAACAGCCCAACTCATTTA
CCAGACGGCACTCATGGAGAGTGGCTTTTCGCTCAATGATCCCAAGGATT
TTGCCTCCCGAATTTACAGCACGGTGAAATCTAGCCTTAACATTAGCCCT
GATGCAGCTGTTGAGGAGGAAGATGATGTAGAAGAGACTGATGCTGACAC
TGAAATGAAAGAATCTTCGGCTGCCAAAGAGGACGTGGATACAGAGTATT
CTGGCAAGGATGAGTTGTAGATTGCCTAATAAAAGCATGGGCAACAACAT
CCCAGTTTCTTAGGAAAGCATAAACGCTCTGCATAGTGCGTTCATTTCCA
GTTTTGAAAACTTTGGTGAAAAAACGTTTTAGATCTTAGATTCAATGTAA
CCATAATCACCGGGAATTTTGTCTTTTAACAGTTGACACTATCAATTATG
GATGAATCAGCGTGTCAAAAAAAAAAAAAAAAAAAAAAAAAAAA
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