CK933992

Overview
NameCK933992
Unique NameCK933992
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length894
Libraries
Library NameType
Developing fruit peel at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
CK933992_ssr317 microsatellite CK933992_ssr317:317..328. BLAST: Citrus ESTs to Prunus persica proteins V1
Csv1_Contig8273 contig Csv1_Contig8273:1851..2742. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CK933992 vs. ExPASy Swiss-Prot
Match: HSP82_ENCCU (Heat shock protein 90 OS=Encephalitozoon cuniculi GN=HSP90 PE=1 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 1.584e-21
Identity = 58/174 (33.33%), Postives = 106/174 (60.92%), Query Frame = 2
Query:    5 YEVIFFTDPVDEYLMQYLMDYEDKKFQNVSKEGLKLGKD-TKDKELKESFKELTKWWKGALASENVDDVKVSNRLDNTPCVVVTSKYGWSANMERIMQSQTLSDASKQAYMR--GKRVLEINPRHPIIKELRERVVKDPEDAGVQQTAQLIYQTALMESGFSLNDPKDFASRIY 517
            YEVI+  + +DE +++ L  Y+    Q ++ EG++L +D   ++E+ +SF+E  K  K  L+S+ V+ V V+ RL + P V+ T+KY  S  ME IM+SQ +++A+  A M    K++ E+NP H ++K L+  +    E   + +  ++ ++T L+ +GF L+DPK F + ++
Sbjct:  501 YEVIYMHEVMDEVMLRGLKKYKGHTIQRITSEGVELPEDEASNEEVVKSFEEFCKKVKDILSSK-VEKVTVNPRLVSVPAVISTTKYSLSGTMENIMKSQPVTEANPFAAMTAVSKKIFEMNPNHQLVKNLK-ALFDSNEIEKMNRILEVFFETVLIHNGFVLSDPKGFCANVF 672          
BLAST of CK933992 vs. ExPASy Swiss-Prot
Match: HTPG_MYCTU (Chaperone protein htpG OS=Mycobacterium tuberculosis GN=htpG PE=3 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 2.069e-21
Identity = 64/186 (34.41%), Postives = 105/186 (56.45%), Query Frame = 2
Query:    2 GYEVIFFTDPVDEYLMQYLMDYEDKKFQNVSKEGLKLG--KDTKDKELKE---SFKELTKWWKGALASENVDDVKVSNRLDNTPCVVVTSKYGWSANMERIMQSQTLSDASKQAYMRGKRVLEINPRHPIIKELRERVVKDPEDA--GVQQTAQLIYQTALMESGFSLNDPKDFASRIYSTVKSSL 538
            GYEV+  TDPVDE  +  + +++ K  Q+V+K  + L   +DT + E +E    F +L  W +  L S++V +V++S RL  +P  ++T  +G +  + RI +      AS Q    GKR+LE+NP HP++  LR+      +DA   + +TA+L+Y TAL+  G +L DP  FA  +   +  +L
Sbjct:  469 GYEVLLLTDPVDEVWVGMVPEFDGKPLQSVAKGEVDLSSEEDTSEAEREERQKEFADLLTWLQETL-SDHVKEVRLSTRLTESPACLITDAFGMTPALARIYR------ASGQEVPVGKRILELNPSHPLVTGLRQAHQDRADDAEKSLAETAELLYGTALLAEGGALEDPARFAELLAERLARTL 647          
BLAST of CK933992 vs. ExPASy Swiss-Prot
Match: HTPG_MYCTA (Chaperone protein htpG OS=Mycobacterium tuberculosis (strain ATCC 25177 / H37Ra) GN=htpG PE=3 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 2.069e-21
Identity = 64/186 (34.41%), Postives = 105/186 (56.45%), Query Frame = 2
Query:    2 GYEVIFFTDPVDEYLMQYLMDYEDKKFQNVSKEGLKLG--KDTKDKELKE---SFKELTKWWKGALASENVDDVKVSNRLDNTPCVVVTSKYGWSANMERIMQSQTLSDASKQAYMRGKRVLEINPRHPIIKELRERVVKDPEDA--GVQQTAQLIYQTALMESGFSLNDPKDFASRIYSTVKSSL 538
            GYEV+  TDPVDE  +  + +++ K  Q+V+K  + L   +DT + E +E    F +L  W +  L S++V +V++S RL  +P  ++T  +G +  + RI +      AS Q    GKR+LE+NP HP++  LR+      +DA   + +TA+L+Y TAL+  G +L DP  FA  +   +  +L
Sbjct:  469 GYEVLLLTDPVDEVWVGMVPEFDGKPLQSVAKGEVDLSSEEDTSEAEREERQKEFADLLTWLQETL-SDHVKEVRLSTRLTESPACLITDAFGMTPALARIYR------ASGQEVPVGKRILELNPSHPLVTGLRQAHQDRADDAEKSLAETAELLYGTALLAEGGALEDPARFAELLAERLARTL 647          
BLAST of CK933992 vs. ExPASy Swiss-Prot
Match: HTPG_MYCBP (Chaperone protein htpG OS=Mycobacterium bovis (strain BCG / Pasteur 1173P2) GN=htpG PE=3 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 2.069e-21
Identity = 64/186 (34.41%), Postives = 105/186 (56.45%), Query Frame = 2
Query:    2 GYEVIFFTDPVDEYLMQYLMDYEDKKFQNVSKEGLKLG--KDTKDKELKE---SFKELTKWWKGALASENVDDVKVSNRLDNTPCVVVTSKYGWSANMERIMQSQTLSDASKQAYMRGKRVLEINPRHPIIKELRERVVKDPEDA--GVQQTAQLIYQTALMESGFSLNDPKDFASRIYSTVKSSL 538
            GYEV+  TDPVDE  +  + +++ K  Q+V+K  + L   +DT + E +E    F +L  W +  L S++V +V++S RL  +P  ++T  +G +  + RI +      AS Q    GKR+LE+NP HP++  LR+      +DA   + +TA+L+Y TAL+  G +L DP  FA  +   +  +L
Sbjct:  469 GYEVLLLTDPVDEVWVGMVPEFDGKPLQSVAKGEVDLSSEEDTSEAEREERQKEFADLLTWLQETL-SDHVKEVRLSTRLTESPACLITDAFGMTPALARIYR------ASGQEVPVGKRILELNPSHPLVTGLRQAHQDRADDAEKSLAETAELLYGTALLAEGGALEDPARFAELLAERLARTL 647          
BLAST of CK933992 vs. ExPASy Swiss-Prot
Match: HTPG_MYCBO (Chaperone protein htpG OS=Mycobacterium bovis GN=htpG PE=3 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 2.069e-21
Identity = 64/186 (34.41%), Postives = 105/186 (56.45%), Query Frame = 2
Query:    2 GYEVIFFTDPVDEYLMQYLMDYEDKKFQNVSKEGLKLG--KDTKDKELKE---SFKELTKWWKGALASENVDDVKVSNRLDNTPCVVVTSKYGWSANMERIMQSQTLSDASKQAYMRGKRVLEINPRHPIIKELRERVVKDPEDA--GVQQTAQLIYQTALMESGFSLNDPKDFASRIYSTVKSSL 538
            GYEV+  TDPVDE  +  + +++ K  Q+V+K  + L   +DT + E +E    F +L  W +  L S++V +V++S RL  +P  ++T  +G +  + RI +      AS Q    GKR+LE+NP HP++  LR+      +DA   + +TA+L+Y TAL+  G +L DP  FA  +   +  +L
Sbjct:  469 GYEVLLLTDPVDEVWVGMVPEFDGKPLQSVAKGEVDLSSEEDTSEAEREERQKEFADLLTWLQETL-SDHVKEVRLSTRLTESPACLITDAFGMTPALARIYR------ASGQEVPVGKRILELNPSHPLVTGLRQAHQDRADDAEKSLAETAELLYGTALLAEGGALEDPARFAELLAERLARTL 647          
BLAST of CK933992 vs. ExPASy Swiss-Prot
Match: HTPG_MYXXD (Chaperone protein htpG OS=Myxococcus xanthus (strain DK 1622) GN=htpG PE=3 SV=1)

HSP 1 Score: 100.523 bits (249), Expect = 1.341e-20
Identity = 64/176 (36.36%), Postives = 103/176 (58.52%), Query Frame = 2
Query:    2 GYEVIFFTDPVDEYLMQYLMDYEDKKFQNVSKEGLKL-GKDTKDKELK---ESFKELTKWWKGALASENVDDVKVSNRLDNTPCVVVTSKYGWSANMERIMQSQTLSDASKQAYM-RGKRVLEINPRHPIIKELRERVVKDPEDAGVQQTAQLIYQTALMESGFSLNDPKDFASRI 514
            G+EV++ TDPVDE+  Q L +++ K   +  +  LKL   D + KE +   E  K LT   K  L  E+V +V+VS+RL ++P  +V  + G  A +ER++Q +      + A M R KR+LE+NP+HP+I+ L+    +DP  A V +  +L++  AL+  G ++ DP  FA R+
Sbjct:  459 GFEVLYMTDPVDEWAAQGLREFQGKPLVSALQADLKLQSTDEQKKEQEQHAEGLKTLTSKMKDVL-QESVREVRVSDRLTDSPVCLVVPEGGSPAYLERLLQQR-----GRGAGMPRVKRILEVNPKHPVIEHLKAVHDRDPAAAQVAEWIELLHDQALLTEGSTIADPNRFARRM 628          
BLAST of CK933992 vs. ExPASy Swiss-Prot
Match: HTPG_RHOSR (Chaperone protein htpG OS=Rhodococcus sp. (strain RHA1) GN=htpG PE=3 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 1.751e-20
Identity = 64/186 (34.41%), Postives = 101/186 (54.30%), Query Frame = 2
Query:    2 GYEVIFFTDPVDEYLMQYLMDYEDKKFQNVSK-------EGLKLGKDTKDKELKESFKELTKWWKGALASENVDDVKVSNRLDNTPCVVVTSKYGWSANMERIMQSQTLSDASKQAYMRGKRVLEINPRHPIIKELRERVVKDPEDAGVQQTAQLIYQTALMESGFSLNDPKDF----ASRIYSTV 526
            G+EV+  TDPVDE  +  + +++ K FQ+++K       E  K   +++ +E ++ F  L  W   AL SE V +V++S RL  +P  +V   +  S  +ER+ +      AS Q     KR+LE+NP HP++  LRE   +  ED  + +TA+L+Y  AL+  G  L DP  F    A+R+  TV
Sbjct:  464 GFEVLLLTDPVDEMWVGAVPEFDGKSFQSIAKGEVDLDTEEDKKAHESEREEQEKDFAGLLSWMADAL-SEQVKEVRLSTRLTTSPACIVGDAFSMSPALERMYR------ASGQPVPVTKRILELNPTHPLVTGLREAHGERNEDPALGETAELLYGMALLAEGGELEDPARFTTMLANRLARTV 642          
BLAST of CK933992 vs. ExPASy Swiss-Prot
Match: HTPG_METCA (Chaperone protein htpG OS=Methylococcus capsulatus GN=htpG PE=3 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 2.287e-20
Identity = 63/183 (34.43%), Postives = 102/183 (55.74%), Query Frame = 2
Query:    8 EVIFFTDPVDEYLMQYLMDYEDKKFQNVSKEGLKLGKDTKDKEL------KESFKELTKWWKGALASENVDDVKVSNRLDNTPCVVVTSKYGWSANMERIMQSQTLSDASKQAYMRGKRVLEINPRHPIIKELRERVVKDPEDAGVQQTAQLIYQTALMESGFSLNDPKDFASRIYSTVKSSL 538
            EV+  +D +DE+L+ YL +YE K  Q+V++  L LGK   ++E       KE+F  LT+  K AL ++ V+DV++S+RL ++P  +++  YG S  MERIM+S      + Q     K +LEINP H +I  L      + +    Q  A L+   A++  G  L+DP +F  ++   ++S L
Sbjct:  463 EVLLLSDRIDEWLVSYLTEYEGKPLQSVARGDLDLGKLEGEEEKAEAAAEKEAFAPLTERLKKALEAK-VNDVRLSHRLTDSPACLISESYGMSRTMERIMKS------AGQNIPGSKPILEINPHHGLIARLN----TEADQTRFQDLASLLLDQAVLAEGGQLDDPAEFVHKLNGLLQSLL 634          
BLAST of CK933992 vs. ExPASy Swiss-Prot
Match: HTPG_MYCUA (Chaperone protein htpG OS=Mycobacterium ulcerans (strain Agy99) GN=htpG PE=3 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 3.902e-20
Identity = 61/187 (32.62%), Postives = 102/187 (54.55%), Query Frame = 2
Query:    2 GYEVIFFTDPVDEYLMQYLMDYEDKKFQNVSKEGLKL-----GKDTKDKELKESFKELTKWWKGALASENVDDVKVSNRLDNTPCVVVTSKYGWSANMERIMQSQTLSDASKQAYMRGKRVLEINPRHPIIKELRERVVKDPEDA---GVQQTAQLIYQTALMESGFSLNDPKDFASRIYSTVKSSL 538
            GYEV+  T+PVDE  +  + +++ K  Q+V+K  + L     G + + +E ++ F +L  W K  L  E V +V++S RL  +P  ++T  +G +  + RI +      A+ Q    GKR LE+NP HP++  LR+      +DA    V +TA+L+Y TAL+  G + +DP  FA  +   +  +L
Sbjct:  469 GYEVLLLTEPVDEVWVGVVNEFDGKPLQSVAKGEVDLDSDGEGSEAEREEQQKEFADLLGWLKETL-GEQVKEVRLSTRLTESPACLITDTFGITPALARIYR------ATGQDVPVGKRTLELNPTHPLVIGLRQAQASADDDAKKEAVSETAELLYGTALLAEGGAPDDPARFAELLADRLTRTL 648          
BLAST of CK933992 vs. ExPASy Swiss-Prot
Match: HTPG_ALHEH (Chaperone protein htpG OS=Alkalilimnicola ehrlichei (strain MLHE-1) GN=htpG PE=3 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 3.902e-20
Identity = 63/177 (35.59%), Postives = 99/177 (55.93%), Query Frame = 2
Query:    2 GYEVIFFTDPVDEYLMQYLMDYEDKKFQNVSKEGLKLG--KDTKDK----ELKESFKELTKWWKGALASENVDDVKVSNRLDNTPCVVVTSKYGWSANMERIMQSQTLSDASKQAYMRGKRVLEINPRHPIIKELRERVVKDPEDAGVQQTAQLIYQTALMESGFSLNDPKDFASRI 514
            G EV+   DPVDE+++ +L +Y+ K  ++V+K GL LG  +D  +K    E  ES K+L +  KGAL  + V +V+VS RL ++P  +V  +Y +   M+R+++      A+  A  +GK  LEIN  HPI+    +R+    +DA     A ++Y  AL+  G  L DP  F  R+
Sbjct:  466 GVEVLLLPDPVDEWVITHLNEYDGKPLKSVAKGGLDLGELEDQAEKKAAEEATESHKDLLEKLKGAL-EDKVSEVRVSTRLTDSPACLVVGEYDFGMGMQRLLK------AAGHAMPQGKPALEINIDHPIV----QRMDTGLDDARFSDWAAVLYDQALLTEGGQLEDPAAFVKRV 631          
The following BLAST results are available for this feature:
BLAST of CK933992 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 315
Match NameE-valueIdentityDescription
HSP82_ENCCU1.584e-2133.33Heat shock protein 90 OS=Encephalitozoon cuniculi ... [more]
HTPG_MYCTU2.069e-2134.41Chaperone protein htpG OS=Mycobacterium tuberculos... [more]
HTPG_MYCTA2.069e-2134.41Chaperone protein htpG OS=Mycobacterium tuberculos... [more]
HTPG_MYCBP2.069e-2134.41Chaperone protein htpG OS=Mycobacterium bovis (str... [more]
HTPG_MYCBO2.069e-2134.41Chaperone protein htpG OS=Mycobacterium bovis GN=h... [more]
HTPG_MYXXD1.341e-2036.36Chaperone protein htpG OS=Myxococcus xanthus (stra... [more]
HTPG_RHOSR1.751e-2034.41Chaperone protein htpG OS=Rhodococcus sp. (strain ... [more]
HTPG_METCA2.287e-2034.43Chaperone protein htpG OS=Methylococcus capsulatus... [more]
HTPG_MYCUA3.902e-2032.62Chaperone protein htpG OS=Mycobacterium ulcerans (... [more]
HTPG_ALHEH3.902e-2035.59Chaperone protein htpG OS=Alkalilimnicola ehrliche... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004542_G03 Developing fruit peel at 38 DAFB Citrus sinensis cDNA clone P38DAB10001_IVF_G03 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK933992 ID=CK933992; Name=CK933992; organism=Citrus sinensis; type=EST; length=894bp
GGGCTATGAGGTGATTTTCTTCACTGATCCAGTTGATGAATACCTGATGC
AATACCTGATGGATTATGAAGACAAAAAGTTCCAAAATGTATCTAAAGAG
GGTCTTAAACTTGGTAAAGACACTAAAGATAAGGAACTTAAGGAGTCATT
CAAGGAGCTCACGAAATGGTGGAAGGGTGCTCTTGCCAGCGAGAACGTGG
ATGATGTGAAAGTAAGCAACCGCTTGGATAACACCCCTTGCGTAGTTGTG
ACATCAAAGTATGGTTGGAGTGCGAATATGGAGAGGATCATGCAGTCTCA
GACTCTCTCAGATGCTAGCAAGCAAGCATATATGCGGGGCAAGAGGGTGC
TTGAAATCAATCCAAGGCATCCAATCATCAAAGAGCTCCGGGAGAGAGTC
GTCAAGGACCCTGAGGATGCGGGTGTCCAGCAAACAGCCCAACTCATTTA
CCAGACGGCACTCATGGAGAGTGGCTTTTCGCTCAATGATCCCAAGGATT
TTGCCTCCCGAATTTACAGCACGGTGAAATCTAGCCTTAACATTAGCCCT
GATGCAGCTGTTGAGGAGGAAGATGATGTAGAAGAGACTGATGCTGACAC
TGAAATGAAAGAATCTTCGGCTGCCAAAGAGGACGTGGATACAGAGTATT
CTGGCAAGGATGAGTTGTAGATTGCCTAATAAAAGCATGGGCAACAACAT
CCCAGTTTCTTAGGAAAGCATAAACGCTCTGCATAGTGCGTTCATTTCCA
GTTTTGAAAACTTTGGTGAAAAAACGTTTTAGATCTTAGATTCAATGTAA
CCATAATCACCGGGAATTTTGTCTTTTAACAGTTGACACTATCAATTATG
GATGAATCAGCGTGTCAAAAAAAAAAAAAAAAAAAAAAAAAAAA
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