CK933993

Overview
NameCK933993
Unique NameCK933993
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length876
Libraries
Library NameType
Developing fruit peel at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK933993 vs. ExPASy Swiss-Prot
Match: FRI1_ARATH (Ferritin-1, chloroplastic OS=Arabidopsis thaliana GN=FER1 PE=1 SV=1)

HSP 1 Score: 251.906 bits (642), Expect = 3.482e-66
Identity = 133/246 (54.07%), Postives = 160/246 (65.04%), Query Frame = 2
Query:  176 FSSVSSAFPPKPSLRF--SSPKNDNG-----------VVVCASKNANNSPLTGVIFAPFEEVKKELDLVPTVPQLSLARHKFTDDCEAAINEQINVEYNVSYVYHAMFAYFDRDNVALKGLXXXXXXXXXXXXXXXXKLMEYQNKRGGKVKLQSILMPLSEFDHAEKGDALYAMEXXXXXXXXXXXXXXXXHKVANKNNDVQLADFVESKYLHEQVEAIKKISEYVAQLRRVGQGHGVWHFDQXXL 874
            F++ + A  PKP L    +SP    G           VV  A+ + NN P+TGV+F PFEEVKK    +P     SLAR +F D  EA INEQINVEYNVSYVYH+M+AYFDRDNVA+KGL                K MEYQN+RGG+VKL  I+ P+SEF+HAEKGDALYAME                HKVA++NND QLADFVES++L EQ+EAIKKIS+Y+ QLR +G+GHGVWHFDQ  L
Sbjct:    9 FTAANPALSPKPLLPHGSASPSVSLGFSRKVGGGRAVVVAAATVDTNNMPMTGVVFQPFEEVKKADLAIPITSHASLARQRFADASEAVINEQINVEYNVSYVYHSMYAYFDRDNVAMKGLAKFFKESSEEERGHAEKFMEYQNQRGGRVKLHPIVSPISEFEHAEKGDALYAMELALSLEKLTNEKLLNVHKVASENNDPQLADFVESEFLGEQIEAIKKISDYITQLRMIGKGHGVWHFDQMLL 254          
BLAST of CK933993 vs. ExPASy Swiss-Prot
Match: FRI_MALXI (Ferritin, chloroplastic OS=Malus xiaojinensis PE=3 SV=1)

HSP 1 Score: 251.136 bits (640), Expect = 5.939e-66
Identity = 140/252 (55.56%), Postives = 160/252 (63.49%), Query Frame = 2
Query:  161 ALNPLFSSVSSAFPPKPS-------------LRFSSPK-NDNGVVVCASKNANNSPLTGVIFAPFEEVKKELDLVPTVPQLSLARHKFTDDCEAAINEQINVEYNVSYVYHAMFAYFDRDNVALKGLXXXXXXXXXXXXXXXXKLMEYQNKRGGKVKLQSILMPLSEFDHAEKGDALYAMEXXXXXXXXXXXXXXXXHKVANKNNDVQLADFVESKYLHEQVEAIKKISEYVAQLRRVGQGHGVWHFDQXXL 874
            AL P   S  S F PKPS             L F + K     + VCAS      PLTGVIF PFEEVKK    VPT PQ+SLAR  + D+CE+AINEQINVEYN SYVYH++FAYFDRDNVALKG                 KLM+YQN RGG+V L +I    SEF+H EKGDALYAME                H VA++NND Q+ADF+ES++L EQVE+IKKISEYVAQLRRVG+GHGVWHFDQ  L
Sbjct:    2 ALAPSKVSTFSGFSPKPSVGGAQKNPTCSVSLSFLNEKLGSRNLRVCAS----TVPLTGVIFEPFEEVKKSELAVPTAPQVSLARQNYADECESAINEQINVEYNASYVYHSLFAYFDRDNVALKGFAKFFKESSEEEREHAEKLMKYQNTRGGRVVLHAIKNVPSEFEHVEKGDALYAMELALSLEKLVNEKLLNVHSVADRNNDPQMADFIESEFLSEQVESIKKISEYVAQLRRVGKGHGVWHFDQRLL 249          
BLAST of CK933993 vs. ExPASy Swiss-Prot
Match: FRI1_SOYBN (Ferritin-1, chloroplastic OS=Glycine max PE=1 SV=4)

HSP 1 Score: 250.751 bits (639), Expect = 7.757e-66
Identity = 140/252 (55.56%), Postives = 159/252 (63.10%), Query Frame = 2
Query:  161 ALNPLFSSVSSAFPPKPS-------------LRFSSPK-NDNGVVVCASKNANNSPLTGVIFAPFEEVKKELDLVPTVPQLSLARHKFTDDCEAAINEQINVEYNVSYVYHAMFAYFDRDNVALKGLXXXXXXXXXXXXXXXXKLMEYQNKRGGKVKLQSILMPLSEFDHAEKGDALYAMEXXXXXXXXXXXXXXXXHKVANKNNDVQLADFVESKYLHEQVEAIKKISEYVAQLRRVGQGHGVWHFDQXXL 874
            AL P   S  S F PKPS             L F + K     + VCAS      PLTGVIF PFEEVKK    VPT PQ+SLAR  + D+CE+AINEQINVEYN SYVYH++FAYFDRDNVALKG                 KLM+YQN RGG+V L  I    SEF+H EKGDALYAME                H VA++NND Q+ADF+ES++L EQVE+IKKISEYVAQLRRVG+GHGVWHFDQ  L
Sbjct:    2 ALAPSKVSTFSGFSPKPSVGGAQKNPTCSVSLSFLNEKLGSRNLRVCAS----TVPLTGVIFEPFEEVKKSELAVPTAPQVSLARQNYADECESAINEQINVEYNASYVYHSLFAYFDRDNVALKGFAKFFKESSEEEREHAEKLMKYQNTRGGRVVLHPIKNAPSEFEHVEKGDALYAMELALSLEKLVNEKLLNVHSVADRNNDPQMADFIESEFLSEQVESIKKISEYVAQLRRVGKGHGVWHFDQRLL 249          
BLAST of CK933993 vs. ExPASy Swiss-Prot
Match: FRI2_MAIZE (Ferritin-2, chloroplastic OS=Zea mays GN=FER2 PE=1 SV=2)

HSP 1 Score: 247.284 bits (630), Expect = 8.576e-65
Identity = 127/220 (57.73%), Postives = 149/220 (67.73%), Query Frame = 2
Query:  218 RFSSPKNDNGVVVCASKNANNSPLTGVIFAPFEEVKKELDLVPTVPQLSLARHKFTDDCEAAINEQINVEYNVSYVYHAMFAYFDRDNVALKGLXXXXXXXXXXXXXXXXKLMEYQNKRGGKVKLQSILMPLSEFDHAEKGDALYAMEXXXXXXXXXXXXXXXXHKVANKNNDVQLADFVESKYLHEQVEAIKKISEYVAQLRRVG-QGHGVWHFDQXXL 874
            R ++ ++   +   A+       L+GV+F PFEE+K EL LVP  P  SLARHKF DDCEAAINEQINVEYN SY YH++FAYFDRDNVALKG                 KLMEYQNKRGG+V+LQSI+ PL+EFDH EKGDALYAME                H VA + ND QL DF+ES++L EQ EAI K+S+YVAQLRRVG +GHGVWHFDQ  L
Sbjct:   29 RVTAQRSGVSLSAAAAAGKGKEVLSGVVFQPFEEIKGELALVPQSPDRSLARHKFVDDCEAAINEQINVEYNASYAYHSLFAYFDRDNVALKGFAKFFKESSDEEREHAEKLMEYQNKRGGRVRLQSIVAPLTEFDHPEKGDALYAMELTLALEKLVNEKLHSLHGVATRCNDPQLIDFIESEFLEEQGEAINKVSKYVAQLRRVGNKGHGVWHFDQMLL 248          
BLAST of CK933993 vs. ExPASy Swiss-Prot
Match: FRI3_VIGUN (Ferritin-3, chloroplastic OS=Vigna unguiculata PE=2 SV=1)

HSP 1 Score: 241.506 bits (615), Expect = 4.706e-63
Identity = 120/207 (57.97%), Postives = 147/207 (71.01%), Query Frame = 2
Query:  254 VCASKNANNSPLTGVIFAPFEEVKKELDLVPTVPQLSLARHKFTDDCEAAINEQINVEYNVSYVYHAMFAYFDRDNVALKGLXXXXXXXXXXXXXXXXKLMEYQNKRGGKVKLQSILMPLSEFDHAEKGDALYAMEXXXXXXXXXXXXXXXXHKVANKNNDVQLADFVESKYLHEQVEAIKKISEYVAQLRRVGQGHGVWHFDQXXL 874
            VCA+ +   +PLTGVIF PF+E+KK+   VP  P +SL+R  ++D+ EAAINEQINVEYNVSYVYH++FAYFDRDN+ALKGL                KL++YQN RGG+V L  I  P SEF+H EKGDALYAME                H VA++NND QLADF+ES++L+EQVE+IKKI+EYV QLR VG+GHGVWHFDQ  L
Sbjct:   48 VCAAASNAPAPLTGVIFEPFQELKKDYLAVPIAPNVSLSRQNYSDEAEAAINEQINVEYNVSYVYHSLFAYFDRDNIALKGLAKFFKESSEEEREHAEKLIKYQNIRGGRVVLHPITSPPSEFEHPEKGDALYAMELALSLEKLTNEKLLYVHSVADRNNDAQLADFIESEFLNEQVESIKKIAEYVTQLRLVGKGHGVWHFDQRLL 254          
BLAST of CK933993 vs. ExPASy Swiss-Prot
Match: FRI_PHAVU (Ferritin, chloroplastic OS=Phaseolus vulgaris GN=PFE PE=2 SV=1)

HSP 1 Score: 239.965 bits (611), Expect = 1.369e-62
Identity = 124/202 (61.39%), Postives = 141/202 (69.80%), Query Frame = 2
Query:  269 NANNSPLTGVIFAPFEEVKKELDLVPTVPQLSLARHKFTDDCEAAINEQINVEYNVSYVYHAMFAYFDRDNVALKGLXXXXXXXXXXXXXXXXKLMEYQNKRGGKVKLQSILMPLSEFDHAEKGDALYAMEXXXXXXXXXXXXXXXXHKVANKNNDVQLADFVESKYLHEQVEAIKKISEYVAQLRRVGQGHGVWHFDQXXL 874
            +A+  PLTGVIF PFEEVKKE   VPT  Q+SLAR  + D+CE+AINEQINVEYN SYVYH++FAYFDRDNVALKG                 KLM+YQN RGG+V L  I    SEF+H EKGDALYAME                H VA++N D QLADF+ES++L EQVEAIKKISEYVAQLR VG+GHGVWHFDQ  L
Sbjct:   47 SASTVPLTGVIFEPFEEVKKEELAVPTAGQVSLARQYYADECESAINEQINVEYNASYVYHSLFAYFDRDNVALKGFARFFKESSEEEREHAEKLMKYQNTRGGRVVLHPIKNVPSEFEHVEKGDALYAMELALSLEKLVNEKLRSVHSVADRNKDPQLADFIESEFLSEQVEAIKKISEYVAQLRMVGKGHGVWHFDQSLL 248          
BLAST of CK933993 vs. ExPASy Swiss-Prot
Match: FRI1_PEA (Ferritin-1, chloroplastic OS=Pisum sativum PE=1 SV=2)

HSP 1 Score: 239.965 bits (611), Expect = 1.369e-62
Identity = 121/202 (59.90%), Postives = 140/202 (69.31%), Query Frame = 2
Query:  269 NANNSPLTGVIFAPFEEVKKELDLVPTVPQLSLARHKFTDDCEAAINEQINVEYNVSYVYHAMFAYFDRDNVALKGLXXXXXXXXXXXXXXXXKLMEYQNKRGGKVKLQSILMPLSEFDHAEKGDALYAMEXXXXXXXXXXXXXXXXHKVANKNNDVQLADFVESKYLHEQVEAIKKISEYVAQLRRVGQGHGVWHFDQXXL 874
            +A  +PLTGVIF PFEEVKK+   VP+VP +SLAR  F D+CE+ INEQINVEYN SYVYH++FAYFDRDNVALKG                 KLM+YQN RGG+V L  I    SEF+H EKGDALYAME                H VA +NND+++  F+E +YL EQVEAIKKISEYVAQLRRVG+GHGVWHFDQ  L
Sbjct:   46 SATTAPLTGVIFEPFEEVKKDYLAVPSVPLVSLARQNFADECESVINEQINVEYNASYVYHSLFAYFDRDNVALKGFAKFFKESSEEHREHAEKLMKYQNTRGGRVVLHPIKDVPSEFEHVEKGDALYAMELALSLEKLTNEKLLNVHSVAERNNDLEMTHFIEGEYLAEQVEAIKKISEYVAQLRRVGKGHGVWHFDQRLL 247          
BLAST of CK933993 vs. ExPASy Swiss-Prot
Match: FRI2_SOYBN (Ferritin-2, chloroplastic OS=Glycine max PE=2 SV=1)

HSP 1 Score: 233.417 bits (594), Expect = 1.282e-60
Identity = 119/207 (57.49%), Postives = 144/207 (69.57%), Query Frame = 2
Query:  254 VCASKNANNSPLTGVIFAPFEEVKKELDLVPTVPQLSLARHKFTDDCEAAINEQINVEYNVSYVYHAMFAYFDRDNVALKGLXXXXXXXXXXXXXXXXKLMEYQNKRGGKVKLQSILMPLSEFDHAEKGDALYAMEXXXXXXXXXXXXXXXXHKVANKNNDVQLADFVESKYLHEQVEAIKKISEYVAQLRRVGQGHGVWHFDQXXL 874
            VCA+ NA  +PL GVIF PF+E+KK+   VP    + LAR  + DD E+AINEQINVEYNVSYVYHA+FAYFDRDN+ALKGL                +L++YQN RGG+V L  I  P SEF+H+EKGDALYAME                H VA +NND Q ADF+ES++L+EQV++IKKI+EYVAQLR VG+GHGVWHFDQ  L
Sbjct:   46 VCAASNAP-APLAGVIFEPFQELKKDYLAVPIAHNVXLARQNYADDSESAINEQINVEYNVSYVYHALFAYFDRDNIALKGLAKFFKESSEEEREHAEQLIKYQNIRGGRVVLHPITSPPSEFEHSEKGDALYAMELALSLEKLTNEKLLHVHSVAERNNDPQXADFIESEFLYEQVKSIKKIAEYVAQLRLVGKGHGVWHFDQKLL 251          
BLAST of CK933993 vs. ExPASy Swiss-Prot
Match: FRIS_LYMST (Soma ferritin OS=Lymnaea stagnalis PE=2 SV=2)

HSP 1 Score: 125.946 bits (315), Expect = 2.882e-28
Identity = 70/172 (40.70%), Postives = 96/172 (55.81%), Query Frame = 2
Query:  359 LSLARHKFTDDCEAAINEQINVEYNVSYVYHAMFAYFDRDNVALKGLXXXXXXXXXXXXXXXXKLMEYQNKRGGKVKLQSILMPLSEFDHAEKGDALYAMEXXXXXXXXXXXXXXXXHKVANKNNDVQLADFVESKYLHEQVEAIKKISEYVAQLRRVGQGHGVWHFDQXXL 874
            +S AR  +  + EA IN QIN+E   SY Y +M  YFDRD+VAL G                 KLM+YQNKRGG++ LQ I  P    D  E G  L AM+                HK+   ++D Q+ADF+ES++L EQV++IK++S+Y+  L+RVG G G + FD+  L
Sbjct:    3 VSQARQNYHAESEAGINRQINMELYASYSYQSMAYYFDRDDVALPGFHKFFKHQSEEEREHAEKLMKYQNKRGGRIVLQDIKKP----DRDEWGTGLEAMQVALQLEKSVNQSLLDLHKLCTSHDDAQMADFLESEFLEEQVKSIKELSDYITNLKRVGPGLGEYIFDKETL 170          
BLAST of CK933993 vs. ExPASy Swiss-Prot
Match: FRIH2_SCHMA (Ferritin-2 heavy chain OS=Schistosoma mansoni GN=SCM-2 PE=2 SV=1)

HSP 1 Score: 117.472 bits (293), Expect = 1.025e-25
Identity = 69/172 (40.12%), Postives = 93/172 (54.07%), Query Frame = 2
Query:  362 SLARHKFTDDCEAAINEQINVEYNVSYVYHAMFAYFDRDNVALKGLXXXXXXXXXXXXXXXXKLMEYQNKRGGKVKLQSILMPL-SEFDHAEKGDALYAMEXXXXXXXXXXXXXXXXHKVANKNNDVQLADFVESKYLHEQVEAIKKISEYVAQLRRVGQGHGVWHFDQXXL 874
            S AR  F  +CE AIN+QINVE   +Y Y A F YFDRD+V+                    KL +YQNKR G+V+   I  P  +EF   E      AM                 H+VA+KNND  LADF+ES++LHEQ +AIK+ ++Y+ + +RVG+G G + FD+  L
Sbjct:    4 SRARQSFATECENAINKQINVELQAAYDYMAFFTYFDRDDVSFPKAAEFFRKASHEEREHAEKLAKYQNKRVGRVQYSDINGPTKTEFSSLED-----AMNTALGMEKAVSKSLLELHEVASKNNDPALADFIESEFLHEQEDAIKQFADYLTETQRVGKGLGEYLFDKLTL 170          
The following BLAST results are available for this feature:
BLAST of CK933993 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 66
Match NameE-valueIdentityDescription
FRI1_ARATH3.482e-6654.07Ferritin-1, chloroplastic OS=Arabidopsis thaliana ... [more]
FRI_MALXI5.939e-6655.56Ferritin, chloroplastic OS=Malus xiaojinensis PE=3... [more]
FRI1_SOYBN7.757e-6655.56Ferritin-1, chloroplastic OS=Glycine max PE=1 SV=4[more]
FRI2_MAIZE8.576e-6557.73Ferritin-2, chloroplastic OS=Zea mays GN=FER2 PE=1... [more]
FRI3_VIGUN4.706e-6357.97Ferritin-3, chloroplastic OS=Vigna unguiculata PE=... [more]
FRI_PHAVU1.369e-6261.39Ferritin, chloroplastic OS=Phaseolus vulgaris GN=P... [more]
FRI1_PEA1.369e-6259.90Ferritin-1, chloroplastic OS=Pisum sativum PE=1 SV... [more]
FRI2_SOYBN1.282e-6057.49Ferritin-2, chloroplastic OS=Glycine max PE=2 SV=1[more]
FRIS_LYMST2.882e-2840.70Soma ferritin OS=Lymnaea stagnalis PE=2 SV=2[more]
FRIH2_SCHMA1.025e-2540.12Ferritin-2 heavy chain OS=Schistosoma mansoni GN=S... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004542_G04 Developing fruit peel at 38 DAFB Citrus sinensis cDNA clone P38DAB10001_IVF_G04 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK933993 ID=CK933993; Name=CK933993; organism=Citrus sinensis; type=EST; length=876bp
GGGGAACCCTCACAGCCTCACAGCCACCGTTGCGTTTCACTTCATTTGCT
CCTCTTTTCAAATCTTTTTGTCCTCGAAATCCGTCAACAAAAACATTTGA
AAACAAAAAATGTTGCTCAAAGCATCTTCAGCTTTATCGCTCGTGAGCCC
CCAAAAGGAGGCTCTAAATCCTCTGTTTTCCTCTGTTTCTTCAGCCTTTC
CGCCGAAACCGAGTCTCCGTTTTTCTTCACCGAAAAACGATAACGGCGTG
GTGGTCTGCGCCTCTAAAAATGCTAACAACAGCCCTTTAACCGGCGTCAT
TTTTGCTCCCTTTGAAGAGGTGAAAAAGGAGCTCGATTTGGTCCCAACTG
TGCCTCAACTGTCTCTTGCCAGACACAAGTTCACTGACGATTGTGAGGCC
GCAATCAACGAGCAGATCAATGTGGAATACAATGTCTCCTATGTGTATCA
TGCCATGTTTGCTTACTTTGACAGAGACAATGTCGCGCTCAAGGGTCTCG
CCAAGTTTTTCAAGGAATCAAGTGAAGAGGAAAGAGAGCATGCTGAGAAA
TTGATGGAATATCAGAACAAACGAGGAGGTAAAGTGAAGCTGCAATCAAT
ATTGATGCCTCTCTCTGAGTTTGATCATGCTGAGAAAGGAGATGCTTTGT
ATGCCATGGAGCTTACGCTGTCTCTGGAGAAGCTAACAAATGAGAAACTC
CTCAACTTGCACAAGGTGGCCAACAAGAACAATGATGTGCAGTTGGCAGA
TTTCGTTGAAAGCAAGTATTTACACGAGCAGGTAGAAGCCATCAAAAAGA
TATCTGAATATGTTGCTCAGCTGAGAAGAGTTGGNCAGGGGCATGGTGTC
TGGCACTTTGATCAAANNNTGCTCCA
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