CK933993

Overview
NameCK933993
Unique NameCK933993
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length876
Libraries
Library NameType
Developing fruit peel at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig8420 contig Csv1_Contig8420:1..864. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CK933993 vs. ExPASy Swiss-Prot
Match: FRIH_SHEEP (Ferritin heavy chain OS=Ovis aries GN=FTH1 PE=1 SV=3)

HSP 1 Score: 111.694 bits (278), Expect = 5.624e-24
Identity = 66/170 (38.82%), Postives = 89/170 (52.35%), Query Frame = 2
Query:  347 TVPQLSLARHKFTDDCEAAINEQINVEYNVSYVYHAMFAYFDRDNVALKGLXXXXXXXXXXXXXXXXKLMEYQNKRGGKVKLQSILMPLSEFDHAEKGDALYAMEXXXXXXXXXXXXXXXXHKVANKNNDVQLADFVESKYLHEQVEAIKKISEYVAQLRRVGQ---GHG 847
            T    S  R  +  D EAAIN QIN+E   SYVY +M  YFDRD+VALK                  +LM+ QN+RG ++ LQ I  P    D  +  + L AME                HK+A + ND  L DF+E+ YL+EQVEAIK++ +++  LR++G    GHG
Sbjct:    2 TTASPSQVRQNYHQDSEAAINRQINLELYASYVYLSMSYYFDRDDVALKNFAKYFLHQSHEEREHAERLMKLQNQRGARIFLQDIKKP----DRDDWENGLNAMECALCLERSVNQSLLELHKLATEKNDPHLCDFIETHYLNEQVEAIKELGDHITNLRKMGALWIGHG 167          
BLAST of CK933993 vs. ExPASy Swiss-Prot
Match: FRIH_PONAB (Ferritin heavy chain OS=Pongo abelii GN=FTH1 PE=2 SV=3)

HSP 1 Score: 111.694 bits (278), Expect = 5.624e-24
Identity = 71/179 (39.66%), Postives = 93/179 (51.96%), Query Frame = 2
Query:  347 TVPQLSLARHKFTDDCEAAINEQINVEYNVSYVYHAMFAYFDRDNVALKGLXXXXXXXXXXXXXXXXKLMEYQNKRGGKVKLQSILMPLSEFDHAEKGDALYAMEXXXXXXXXXXXXXXXXHKVANKNNDVQLADFVESKYLHEQVEAIKKISEYVAQLRRVG---QGHGVWHFDQXXL 874
            T    S  R  +  D EAAIN QIN+E   SYVY +M  YFDRD+VALK                  KLM+ QN+RGG++ LQ I  P  + D  E G  L AME                HK+A   ND  L DF+E+ YL+EQV+AIK++ ++V  LR++G    G   + FD+  L
Sbjct:    2 TTASTSQVRQNYHQDSEAAINRQINLELYASYVYLSMSYYFDRDDVALKNFAKYFLHQSHEEREHAEKLMKLQNQRGGRIFLQDIKKP--DCDDWESG--LNAMECALHLEKNVNQSLLELHKLATDKNDPHLCDFLETHYLNEQVKAIKELGDHVTNLRKMGAPESGLAEYLFDKHTL 176          
BLAST of CK933993 vs. ExPASy Swiss-Prot
Match: FRIH_TRIVU (Ferritin heavy chain OS=Trichosurus vulpecula GN=FTH1 PE=2 SV=3)

HSP 1 Score: 110.923 bits (276), Expect = 9.593e-24
Identity = 69/179 (38.55%), Postives = 90/179 (50.28%), Query Frame = 2
Query:  347 TVPQLSLARHKFTDDCEAAINEQINVEYNVSYVYHAMFAYFDRDNVALKGLXXXXXXXXXXXXXXXXKLMEYQNKRGGKVKLQSILMPLSEFDHAEKGDALYAMEXXXXXXXXXXXXXXXXHKVANKNNDVQLADFVESKYLHEQVEAIKKISEYVAQLRRVG---QGHGVWHFDQXXL 874
            T    S  R  +  D EAAIN QIN+E   SYVY +M  YFDRD+VALK                  KLM+ QN+RGG++ LQ I  P    D  +    L AME                HK+A   ND  L DF+E+ YL EQV+AIK++ ++V  LR++G    G   + FD+  L
Sbjct:    2 TTSSPSQVRQNYHQDSEAAINRQINLELYASYVYLSMSYYFDRDDVALKNFAKYFLHQSHEEREHAEKLMKLQNQRGGRIFLQDIKKP----DRDDWESGLNAMECALHLEKNVNQSLLELHKLATDKNDPHLCDFIETHYLDEQVKAIKQLGDHVTNLRKMGAPDSGMAEYLFDKHTL 176          
BLAST of CK933993 vs. ExPASy Swiss-Prot
Match: FRIH_SALSA (Ferritin, heavy subunit OS=Salmo salar PE=2 SV=1)

HSP 1 Score: 110.923 bits (276), Expect = 9.593e-24
Identity = 65/174 (37.36%), Postives = 91/174 (52.30%), Query Frame = 2
Query:  362 SLARHKFTDDCEAAINEQINVEYNVSYVYHAMFAYFDRDNVALKGLXXXXXXXXXXXXXXXXKLMEYQNKRGGKVKLQSILMPLSEFDHAEKGDALYAMEXXXXXXXXXXXXXXXXHKVANKNNDVQLADFVESKYLHEQVEAIKKISEYVAQLRRVG---QGHGVWHFDQXXL 874
            S  R  F  DCEAAIN QIN+E   SYVY +M  YFDRD+ AL                   KLM+ QN+RGG++ LQ +  P    +  E G  + A+E                HKV +++ND  + DF+E+ YL EQV++IK++ ++V  LRR+G    G   + FD+  L
Sbjct:    3 SQVRQNFHQDCEAAINRQINLELYASYVYLSMAYYFDRDDQALHNFAKFFKNQSHEEREHAEKLMKVQNQRGGRIFLQDVKKP----EKDEWGSGVEALESSLQLEKSVNQSLLDLHKVCSEHNDPHMCDFIETHYLDEQVKSIKELGDWVTNLRRMGAPQNGMAEYLFDKHTL 172          
BLAST of CK933993 vs. ExPASy Swiss-Prot
Match: FRIH_FELCA (Ferritin heavy chain OS=Felis catus GN=FTH1 PE=2 SV=3)

HSP 1 Score: 110.923 bits (276), Expect = 9.593e-24
Identity = 68/179 (37.99%), Postives = 92/179 (51.40%), Query Frame = 2
Query:  347 TVPQLSLARHKFTDDCEAAINEQINVEYNVSYVYHAMFAYFDRDNVALKGLXXXXXXXXXXXXXXXXKLMEYQNKRGGKVKLQSILMPLSEFDHAEKGDALYAMEXXXXXXXXXXXXXXXXHKVANKNNDVQLADFVESKYLHEQVEAIKKISEYVAQLRRVG---QGHGVWHFDQXXL 874
            T    S  R  +  D EAAIN QIN+E   SYVY +M  YFDRD+VALK                  KLM+ QN+RGG++ LQ I  P    D  +  + L AME                HK+A   ND  L DF+E+ YL+EQV++IK++ ++V  LR++G    G   + FD+  L
Sbjct:    2 TTASPSQVRQNYHQDSEAAINRQINLELYASYVYLSMSYYFDRDDVALKNFAKYFLHQSHEEREHAEKLMKLQNQRGGRIFLQDIKKP----DRDDWENGLNAMECALHLEKSVNQSLLELHKLATDKNDPHLCDFIETHYLNEQVKSIKELGDHVTNLRKMGTPESGMAEYLFDKHTL 176          
BLAST of CK933993 vs. ExPASy Swiss-Prot
Match: FRIH_CRIGR (Ferritin heavy chain OS=Cricetulus griseus GN=FTH1 PE=2 SV=2)

HSP 1 Score: 110.923 bits (276), Expect = 9.593e-24
Identity = 68/179 (37.99%), Postives = 91/179 (50.84%), Query Frame = 2
Query:  347 TVPQLSLARHKFTDDCEAAINEQINVEYNVSYVYHAMFAYFDRDNVALKGLXXXXXXXXXXXXXXXXKLMEYQNKRGGKVKLQSILMPLSEFDHAEKGDALYAMEXXXXXXXXXXXXXXXXHKVANKNNDVQLADFVESKYLHEQVEAIKKISEYVAQLRRVG---QGHGVWHFDQXXL 874
            T    S  R  +  D EAAIN QIN+E   SYVY +M  YFDRD+VALK                  KLM+ QN+RGG++ LQ I  P    D  +    L AME                HK+A   ND  L DF+E+ YL+EQV++IK++ ++V  LR++G    G   + FD+  L
Sbjct:    7 TTASPSQVRQNYHQDSEAAINRQINLELYASYVYLSMSCYFDRDDVALKNFAKYFLHQSHEEREHAEKLMKLQNQRGGRIFLQDIKKP----DRDDWESGLNAMECALHLEKSVNQSLLELHKLATDKNDPHLCDFIETHYLNEQVKSIKELGDHVTNLRKMGAPEAGMAEYLFDKHTL 181          
BLAST of CK933993 vs. ExPASy Swiss-Prot
Match: FRIH_CANFA (Ferritin heavy chain OS=Canis familiaris GN=FTH1 PE=2 SV=3)

HSP 1 Score: 110.923 bits (276), Expect = 9.593e-24
Identity = 68/179 (37.99%), Postives = 92/179 (51.40%), Query Frame = 2
Query:  347 TVPQLSLARHKFTDDCEAAINEQINVEYNVSYVYHAMFAYFDRDNVALKGLXXXXXXXXXXXXXXXXKLMEYQNKRGGKVKLQSILMPLSEFDHAEKGDALYAMEXXXXXXXXXXXXXXXXHKVANKNNDVQLADFVESKYLHEQVEAIKKISEYVAQLRRVG---QGHGVWHFDQXXL 874
            T    S  R  +  D EAAIN QIN+E   SYVY +M  YFDRD+VALK                  KLM+ QN+RGG++ LQ I  P    D  +  + L AME                HK+A   ND  L DF+E+ YL+EQV++IK++ ++V  LR++G    G   + FD+  L
Sbjct:    2 TTASPSQVRQNYHQDSEAAINRQINLELYASYVYLSMSYYFDRDDVALKNFAKYFLHQSHEEREHAEKLMKLQNQRGGRIFLQDIKKP----DRDDWENGLNAMECALHLEKSVNQSLLELHKLATDKNDPHLCDFIETHYLNEQVKSIKELGDHVTNLRKMGAPESGMAEYLFDKHTL 176          
BLAST of CK933993 vs. ExPASy Swiss-Prot
Match: FRIH_PIG (Ferritin heavy chain OS=Sus scrofa GN=FTH1 PE=1 SV=3)

HSP 1 Score: 110.538 bits (275), Expect = 1.253e-23
Identity = 69/174 (39.66%), Postives = 90/174 (51.72%), Query Frame = 2
Query:  362 SLARHKFTDDCEAAINEQINVEYNVSYVYHAMFAYFDRDNVALKGLXXXXXXXXXXXXXXXXKLMEYQNKRGGKVKLQSILMPLSEFDHAEKGDALYAMEXXXXXXXXXXXXXXXXHKVANKNNDVQLADFVESKYLHEQVEAIKKISEYVAQLRRVG---QGHGVWHFDQXXL 874
            S  R  +  D EAAIN QIN+E   SYVY +M  YFDRD+VALK                  KLM+ Q +RG ++ LQ I+ P  E D  E G  L AME                HK+A   ND  L DF+E+ YLHEQV+AIK++ +++  L R+G    G   + FD+  L
Sbjct:    7 SQVRQNYHQDSEAAINRQINLELYASYVYLSMSYYFDRDDVALKNFAKYFLHQSHGGRGHAEKLMKLQTQRGARIFLQDIMKP--ERDDWENG--LTAMEFALHVVKNVYQSLLELHKLATDKNDPHLCDFIETHYLHEQVKAIKELGDHITNLHRMGAPEYGMAEYLFDKHTL 176          
BLAST of CK933993 vs. ExPASy Swiss-Prot
Match: FRIH_MOUSE (Ferritin heavy chain OS=Mus musculus GN=Fth1 PE=1 SV=2)

HSP 1 Score: 110.153 bits (274), Expect = 1.636e-23
Identity = 68/179 (37.99%), Postives = 90/179 (50.28%), Query Frame = 2
Query:  347 TVPQLSLARHKFTDDCEAAINEQINVEYNVSYVYHAMFAYFDRDNVALKGLXXXXXXXXXXXXXXXXKLMEYQNKRGGKVKLQSILMPLSEFDHAEKGDALYAMEXXXXXXXXXXXXXXXXHKVANKNNDVQLADFVESKYLHEQVEAIKKISEYVAQLRRVG---QGHGVWHFDQXXL 874
            T    S  R  +  D EAAIN QIN+E   SYVY +M  YFDRD+VALK                  KLM+ QN+RGG++ LQ I  P    D  +    L AME                HK+A   ND  L DF+E+ YL EQV++IK++ ++V  LR++G    G   + FD+  L
Sbjct:    2 TTASPSQVRQNYHQDAEAAINRQINLELYASYVYLSMSCYFDRDDVALKNFAKYFLHQSHEEREHAEKLMKLQNQRGGRIFLQDIKKP----DRDDWESGLNAMECALHLEKSVNQSLLELHKLATDKNDPHLCDFIETYYLSEQVKSIKELGDHVTNLRKMGAPEAGMAEYLFDKHTL 176          
BLAST of CK933993 vs. ExPASy Swiss-Prot
Match: FRI1_RANCA (Ferritin, higher subunit OS=Rana catesbeiana PE=1 SV=3)

HSP 1 Score: 110.153 bits (274), Expect = 1.636e-23
Identity = 63/171 (36.84%), Postives = 90/171 (52.63%), Query Frame = 2
Query:  362 SLARHKFTDDCEAAINEQINVEYNVSYVYHAMFAYFDRDNVALKGLXXXXXXXXXXXXXXXXKLMEYQNKRGGKVKLQSILMPLSEFDHAEKGDALYAMEXXXXXXXXXXXXXXXXHKVANKNNDVQLADFVESKYLHEQVEAIKKISEYVAQLRRVG---QGHGVWHFDQ 865
            S  R  F  DCEAAIN  +N+E   SY Y +M  YFDRD++AL  +                KLM+ QNKRGG++ LQ +  P    +  E G+ L AM+                HKV +   D  L DF+E++YL EQV++IK++ +Y+  L+R+G    G G + FD+
Sbjct:    3 SQVRQNFHRDCEAAINRMVNMELYASYTYLSMAFYFDRDDIALHNVAKFFKEQSHEEREHAEKLMKDQNKRGGRIVLQDVKKP----ERDEWGNTLEAMQAALQLEKTVNQALLDLHKVGSDKVDPHLCDFLETEYLEEQVKSIKQLGDYITNLKRLGLPQNGMGEYLFDK 169          
The following BLAST results are available for this feature:
BLAST of CK933993 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 66
Match NameE-valueIdentityDescription
FRIH_SHEEP5.624e-2438.82Ferritin heavy chain OS=Ovis aries GN=FTH1 PE=1 SV... [more]
FRIH_PONAB5.624e-2439.66Ferritin heavy chain OS=Pongo abelii GN=FTH1 PE=2 ... [more]
FRIH_TRIVU9.593e-2438.55Ferritin heavy chain OS=Trichosurus vulpecula GN=F... [more]
FRIH_SALSA9.593e-2437.36Ferritin, heavy subunit OS=Salmo salar PE=2 SV=1[more]
FRIH_FELCA9.593e-2437.99Ferritin heavy chain OS=Felis catus GN=FTH1 PE=2 S... [more]
FRIH_CRIGR9.593e-2437.99Ferritin heavy chain OS=Cricetulus griseus GN=FTH1... [more]
FRIH_CANFA9.593e-2437.99Ferritin heavy chain OS=Canis familiaris GN=FTH1 P... [more]
FRIH_PIG1.253e-2339.66Ferritin heavy chain OS=Sus scrofa GN=FTH1 PE=1 SV... [more]
FRIH_MOUSE1.636e-2337.99Ferritin heavy chain OS=Mus musculus GN=Fth1 PE=1 ... [more]
FRI1_RANCA1.636e-2336.84Ferritin, higher subunit OS=Rana catesbeiana PE=1 ... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004542_G04 Developing fruit peel at 38 DAFB Citrus sinensis cDNA clone P38DAB10001_IVF_G04 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK933993 ID=CK933993; Name=CK933993; organism=Citrus sinensis; type=EST; length=876bp
GGGGAACCCTCACAGCCTCACAGCCACCGTTGCGTTTCACTTCATTTGCT
CCTCTTTTCAAATCTTTTTGTCCTCGAAATCCGTCAACAAAAACATTTGA
AAACAAAAAATGTTGCTCAAAGCATCTTCAGCTTTATCGCTCGTGAGCCC
CCAAAAGGAGGCTCTAAATCCTCTGTTTTCCTCTGTTTCTTCAGCCTTTC
CGCCGAAACCGAGTCTCCGTTTTTCTTCACCGAAAAACGATAACGGCGTG
GTGGTCTGCGCCTCTAAAAATGCTAACAACAGCCCTTTAACCGGCGTCAT
TTTTGCTCCCTTTGAAGAGGTGAAAAAGGAGCTCGATTTGGTCCCAACTG
TGCCTCAACTGTCTCTTGCCAGACACAAGTTCACTGACGATTGTGAGGCC
GCAATCAACGAGCAGATCAATGTGGAATACAATGTCTCCTATGTGTATCA
TGCCATGTTTGCTTACTTTGACAGAGACAATGTCGCGCTCAAGGGTCTCG
CCAAGTTTTTCAAGGAATCAAGTGAAGAGGAAAGAGAGCATGCTGAGAAA
TTGATGGAATATCAGAACAAACGAGGAGGTAAAGTGAAGCTGCAATCAAT
ATTGATGCCTCTCTCTGAGTTTGATCATGCTGAGAAAGGAGATGCTTTGT
ATGCCATGGAGCTTACGCTGTCTCTGGAGAAGCTAACAAATGAGAAACTC
CTCAACTTGCACAAGGTGGCCAACAAGAACAATGATGTGCAGTTGGCAGA
TTTCGTTGAAAGCAAGTATTTACACGAGCAGGTAGAAGCCATCAAAAAGA
TATCTGAATATGTTGCTCAGCTGAGAAGAGTTGGNCAGGGGCATGGTGTC
TGGCACTTTGATCAAANNNTGCTCCA
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