CK933993

Overview
NameCK933993
Unique NameCK933993
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length876
Libraries
Library NameType
Developing fruit peel at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig8420 contig Csv1_Contig8420:1..864. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CK933993 vs. ExPASy Swiss-Prot
Match: FRIH3_XENLA (Ferritin heavy chain, oocyte isoform OS=Xenopus laevis PE=1 SV=1)

HSP 1 Score: 109.768 bits (273), Expect = 2.137e-23
Identity = 65/174 (37.36%), Postives = 92/174 (52.87%), Query Frame = 2
Query:  362 SLARHKFTDDCEAAINEQINVEYNVSYVYHAMFAYFDRDNVALKGLXXXXXXXXXXXXXXXXKLMEYQNKRGGKVKLQSILMPLSEFDHAEKGDALYAMEXXXXXXXXXXXXXXXXHKVANKNNDVQLADFVESKYLHEQVEAIKKISEYVAQLRRVG---QGHGVWHFDQXXL 874
            S  R  F  +CEAAIN Q+N+E   SYVY +M  YFDRD+VALK                  KLM+ QN+RGG++ LQ I  P    +  E  + L A+E                HK++  +ND  L DF+ES YL EQV+++K++ +++  LRR+G    G   + FD+  L
Sbjct:    3 SQIRQNFHQECEAAINRQVNMELYASYVYLSMSYYFDRDDVALKNFAKYFLHQSHEEREHAEKLMKMQNQRGGRLFLQDIKKP----ERDEWANGLEALECSLQLEKNVNQSILELHKLSTDHNDPHLCDFLESHYLDEQVKSMKELGDHITNLRRMGAPSNGLAEYLFDKHTL 172          
BLAST of CK933993 vs. ExPASy Swiss-Prot
Match: FRIH_RAT (Ferritin heavy chain OS=Rattus norvegicus GN=Fth1 PE=1 SV=3)

HSP 1 Score: 109.383 bits (272), Expect = 2.791e-23
Identity = 67/179 (37.43%), Postives = 90/179 (50.28%), Query Frame = 2
Query:  347 TVPQLSLARHKFTDDCEAAINEQINVEYNVSYVYHAMFAYFDRDNVALKGLXXXXXXXXXXXXXXXXKLMEYQNKRGGKVKLQSILMPLSEFDHAEKGDALYAMEXXXXXXXXXXXXXXXXHKVANKNNDVQLADFVESKYLHEQVEAIKKISEYVAQLRRVG---QGHGVWHFDQXXL 874
            T    S  R  +  D EAAIN QIN+E   SYVY +M  YFDRD+VALK                  KLM+ QN+RGG++ LQ I  P    D  +    L AM                 HK+A   ND  L DF+E+ YL+EQV++IK++ ++V  LR++G    G   + FD+  L
Sbjct:    2 TTASPSQVRQNYHQDSEAAINRQINLELYASYVYLSMSCYFDRDDVALKNFAKYFLHQSHEEREHAEKLMKLQNQRGGRIFLQDIKKP----DRDDWESGLNAMRCALHLEKSVNQSLLELHKLATDKNDPHLCDFIETHYLNEQVKSIKELGDHVTNLRKMGAPESGMAEYLFDKHTL 176          
BLAST of CK933993 vs. ExPASy Swiss-Prot
Match: FRIH1_SCHMA (Ferritin-1 heavy chain OS=Schistosoma mansoni GN=SCM-1 PE=2 SV=1)

HSP 1 Score: 108.997 bits (271), Expect = 3.645e-23
Identity = 60/172 (34.88%), Postives = 87/172 (50.58%), Query Frame = 2
Query:  359 LSLARHKFTDDCEAAINEQINVEYNVSYVYHAMFAYFDRDNVALKGLXXXXXXXXXXXXXXXXKLMEYQNKRGGKVKLQSILMPLSEFDHAEKGDALYAMEXXXXXXXXXXXXXXXXHKVANKNNDVQLADFVESKYLHEQVEAIKKISEYVAQLRRVGQGHGVWHFDQXXL 874
            +SL R  + ++CEA +N+QIN+E   SYVY  M  +F+RD+VAL G                 KLM YQN RGG++ LQ I  P            L+AM+                  V  ++ D    DF+ ++YL  QV+++KK+S+Y+  L RVG G G + FD+  L
Sbjct:    1 MSLCRQNYHEECEAGVNKQINMELYASYVYMTMAFHFNRDDVALNGFYKFFLNESEEERQHAIKLMTYQNMRGGRIVLQDISAP----PQLSWNSGLHAMQDALDLEKKVNQSLMELVAVGERHRDTHFCDFINNEYLEIQVQSMKKLSDYITNLIRVGNGLGEYTFDKETL 168          
BLAST of CK933993 vs. ExPASy Swiss-Prot
Match: FRIH_RABIT (Ferritin heavy chain (Fragment) OS=Oryctolagus cuniculus GN=FTH1 PE=2 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 5.264e-22
Identity = 65/161 (40.37%), Postives = 87/161 (54.04%), Query Frame = 2
Query:  401 AINEQINVEYNVSYVYHAMFAYFDRDNVALKGLXXXXXXXXXXXXXXXXKLMEYQNKRGGKVKLQSILMPLSEFDHAEKGDALYAMEXXXXXXXXXXXXXXXXHKVANKNNDVQLADFVESKYLHEQVEAIKKISEYVAQLRRVG---QGHGVWHFDQXXL 874
            AIN QIN+E   SYVY +M  YFDRD+VALK                  KLM+ QN+RGG++ LQ I  P  E+D  E G  L AME                HK+A   ND  L DF+E+ YL+EQV++IK++ ++V  LR++G    G   + FD+  L
Sbjct:    1 AINRQINLELYASYVYLSMSYYFDRDDVALKNFAKYFLHQSHEEREHAEKLMKLQNQRGGRIFLQDIKKP--EYDDWESG--LNAMECALHLEKSVNQSLLELHKLATDKNDPHLCDFIETHYLNEQVKSIKELGDHVTNLRKMGAPESGMAEYLFDKHTL 157          
BLAST of CK933993 vs. ExPASy Swiss-Prot
Match: FRIM_SALSA (Ferritin, middle subunit OS=Salmo salar PE=2 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 6.875e-22
Identity = 59/157 (37.58%), Postives = 81/157 (51.59%), Query Frame = 2
Query:  362 SLARHKFTDDCEAAINEQINVEYNVSYVYHAMFAYFDRDNVALKGLXXXXXXXXXXXXXXXXKLMEYQNKRGGKVKLQSILMPLSEFDHAEKGDALYAMEXXXXXXXXXXXXXXXXHKVANKNNDVQLADFVESKYLHEQVEAIKKISEYVAQLRRV 832
            S  R  +  DCE AIN  IN+E   SY Y +M  YF RD+VAL G                 KL+ +QNKRGG++ LQ I  P    +  E G+ L AM+                HK+A+   D  L DF+E+ YL+EQVEAIKK+ +++  L ++
Sbjct:    3 SQIRQNYHHDCERAINRMINMEMFASYTYTSMAFYFSRDDVALPGFAHFFKENSEEEREHADKLLSFQNKRGGRILLQDIKKP----ERDEWGNGLEAMQCALQLEKNVNQALLDLHKIASDKVDPHLCDFLETHYLNEQVEAIKKLGDHITNLTKM 155          
BLAST of CK933993 vs. ExPASy Swiss-Prot
Match: FRI3_RANCA (Ferritin, lower subunit OS=Rana catesbeiana PE=1 SV=1)

HSP 1 Score: 102.834 bits (255), Expect = 2.612e-21
Identity = 55/161 (34.16%), Postives = 84/161 (52.17%), Query Frame = 2
Query:  362 SLARHKFTDDCEAAINEQINVEYNVSYVYHAMFAYFDRDNVALKGLXXXXXXXXXXXXXXXXKLMEYQNKRGGKVKLQSILMPLSEFDHAEKGDALYAMEXXXXXXXXXXXXXXXXHKVANKNNDVQLADFVESKYLHEQVEAIKKISEYVAQLRRVGQGH 844
            S  R  F  DCEA +N  +N++++ SYVY +M +YF+RD+VAL                   KL+EYQN+RGG+V LQS+  P    +  +  + L A++                H VA   +D  + DF+ES YL E VE IKK+ +++  L+++   H
Sbjct:    3 SQVRQNFHQDCEAGLNRTVNLKFHSSYVYLSMASYFNRDDVALSNFAKFFRERSEEEKEHAEKLIEYQNQRGGRVFLQSVEKP----ERDDWANGLEALQTALKLQKSVNQALLDLHAVAADKSDPHMTDFLESPYLSESVETIKKLGDHITSLKKLWSSH 159          
BLAST of CK933993 vs. ExPASy Swiss-Prot
Match: FRIM_TRENE (Ferritin, middle subunit OS=Trematomus newnesi PE=1 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 4.456e-21
Identity = 56/157 (35.67%), Postives = 81/157 (51.59%), Query Frame = 2
Query:  362 SLARHKFTDDCEAAINEQINVEYNVSYVYHAMFAYFDRDNVALKGLXXXXXXXXXXXXXXXXKLMEYQNKRGGKVKLQSILMPLSEFDHAEKGDALYAMEXXXXXXXXXXXXXXXXHKVANKNNDVQLADFVESKYLHEQVEAIKKISEYVAQLRRV 832
            S  R  +  DCEAA+N  IN+E   SY Y +M  YF RD+VAL G                 KL+ +QN RGG++ LQ I  P    +  E G  L A++                HK+A+ + D  + DF+E+ YL+EQVE+IKK+ +++  L R+
Sbjct:    3 SQVRQNYHRDCEAAVNRMINMELFASYSYTSMAFYFSRDDVALPGFAHFFKENSEEEREHADKLLTFQNSRGGRIFLQDIKKP----ERDEWGSGLDALQSSLQLEKNVNQALLDLHKIASDHTDPHMCDFLETHYLNEQVESIKKLGDFITNLSRM 155          
BLAST of CK933993 vs. ExPASy Swiss-Prot
Match: FRIML_PAGBE (Ferritin, liver middle subunit OS=Pagothenia bernacchii PE=1 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 4.456e-21
Identity = 56/157 (35.67%), Postives = 81/157 (51.59%), Query Frame = 2
Query:  362 SLARHKFTDDCEAAINEQINVEYNVSYVYHAMFAYFDRDNVALKGLXXXXXXXXXXXXXXXXKLMEYQNKRGGKVKLQSILMPLSEFDHAEKGDALYAMEXXXXXXXXXXXXXXXXHKVANKNNDVQLADFVESKYLHEQVEAIKKISEYVAQLRRV 832
            S  R  +  DCEAA+N  IN+E   SY Y +M  YF RD+VAL G                 KL+ +QN RGG++ LQ I  P    +  E G  L A++                HK+A+ + D  + DF+E+ YL+EQVE+IKK+ +++  L R+
Sbjct:    3 SQVRQNYHRDCEAAVNRMINMELFASYSYTSMAFYFSRDDVALPGFAHFFKENSDEEREHADKLLTFQNSRGGRIFLQDIKKP----ERDEWGSGLDALQSSLQLEKNVNQALLDLHKIASDHTDPHMCDFLETHYLNEQVESIKKLGDFITNLSRM 155          
BLAST of CK933993 vs. ExPASy Swiss-Prot
Match: FTMT_HUMAN (Ferritin, mitochondrial OS=Homo sapiens GN=FTMT PE=1 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 7.601e-21
Identity = 65/166 (39.16%), Postives = 86/166 (51.81%), Query Frame = 2
Query:  344 PTVPQL--SLARHKFTDDCEAAINEQINVEYNVSYVYHAMFAYFDRDNVALKGLXXXXXXXXXXXXXXXXKLMEYQNKRGGKVKLQSILMPLSEFDHAEKGDALYAMEXXXXXXXXXXXXXXXXHKVANKNNDVQLADFVESKYLHEQVEAIKKISEYVAQLRRVG 835
            PT P    S  R  F  D EAAIN QIN+E   SYVY +M  YF RD+VAL                   KLM  QN+RGG+++LQ I  P  E D  E G  L+AME                H +A+   D  L DF+E+ YL+EQV++IK++ ++V  L ++G
Sbjct:   58 PTGPAAGPSRVRQNFHPDSEAAINRQINLELYASYVYLSMAYYFSRDDVALNNFSRYFLHQSREETEHAEKLMRLQNQRGGRIRLQDIKKP--EQDDWESG--LHAMECALLLEKNVNQSLLELHALASDKGDPHLCDFLETYYLNEQVKSIKELGDHVHNLVKMG 219          
BLAST of CK933993 vs. ExPASy Swiss-Prot
Match: FRI_PACLE (Ferritin OS=Pacifastacus leniusculus PE=1 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 2.211e-20
Identity = 61/169 (36.09%), Postives = 90/169 (53.25%), Query Frame = 2
Query:  362 SLARHKFTDDCEAAINEQINVEYNVSYVYHAMFAYFDRDNVALKGLXXXXXXXXXXXXXXXXKLMEYQNKRGGKVKLQSILMPLSEFDHAEKGDALYAMEXXXXXXXXXXXXXXXXHKVANKNNDVQLADFVESKYLHEQVEAIKKISEYVAQLRRVG-QGHGVWHFDQ 865
            S  RH + +DCE  IN+QIN+E+  SYVY +M  YFDRD+++L G                 KLM+YQNKRG ++ LQ+I  P  +    E G+   A++                   A+K ND  L + +E ++L EQVE+I+KI   + +L+R G  G G + FD+
Sbjct:    3 SQIRHNYHEDCEP-INKQINLEFYASYVYMSMGHYFDRDDISLPGASKFFKDSSDEEREHGQKLMKYQNKRGARIVLQAIAAPSLQ----EWGNLHDALQAALDLENEVNQSLLDLDATASKINDPHLTNMLEGEFLEEQVESIEKIGNLITRLKRAGTSGLGEFLFDK 166          
The following BLAST results are available for this feature:
BLAST of CK933993 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 66
Match NameE-valueIdentityDescription
FRIH3_XENLA2.137e-2337.36Ferritin heavy chain, oocyte isoform OS=Xenopus la... [more]
FRIH_RAT2.791e-2337.43Ferritin heavy chain OS=Rattus norvegicus GN=Fth1 ... [more]
FRIH1_SCHMA3.645e-2334.88Ferritin-1 heavy chain OS=Schistosoma mansoni GN=S... [more]
FRIH_RABIT5.264e-2240.37Ferritin heavy chain (Fragment) OS=Oryctolagus cun... [more]
FRIM_SALSA6.875e-2237.58Ferritin, middle subunit OS=Salmo salar PE=2 SV=1[more]
FRI3_RANCA2.612e-2134.16Ferritin, lower subunit OS=Rana catesbeiana PE=1 S... [more]
FRIM_TRENE4.456e-2135.67Ferritin, middle subunit OS=Trematomus newnesi PE=... [more]
FRIML_PAGBE4.456e-2135.67Ferritin, liver middle subunit OS=Pagothenia berna... [more]
FTMT_HUMAN7.601e-2139.16Ferritin, mitochondrial OS=Homo sapiens GN=FTMT PE... [more]
FRI_PACLE2.211e-2036.09Ferritin OS=Pacifastacus leniusculus PE=1 SV=1[more]

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Properties
Property NameValue
Genbank descriptionCGF1004542_G04 Developing fruit peel at 38 DAFB Citrus sinensis cDNA clone P38DAB10001_IVF_G04 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK933993 ID=CK933993; Name=CK933993; organism=Citrus sinensis; type=EST; length=876bp
GGGGAACCCTCACAGCCTCACAGCCACCGTTGCGTTTCACTTCATTTGCT
CCTCTTTTCAAATCTTTTTGTCCTCGAAATCCGTCAACAAAAACATTTGA
AAACAAAAAATGTTGCTCAAAGCATCTTCAGCTTTATCGCTCGTGAGCCC
CCAAAAGGAGGCTCTAAATCCTCTGTTTTCCTCTGTTTCTTCAGCCTTTC
CGCCGAAACCGAGTCTCCGTTTTTCTTCACCGAAAAACGATAACGGCGTG
GTGGTCTGCGCCTCTAAAAATGCTAACAACAGCCCTTTAACCGGCGTCAT
TTTTGCTCCCTTTGAAGAGGTGAAAAAGGAGCTCGATTTGGTCCCAACTG
TGCCTCAACTGTCTCTTGCCAGACACAAGTTCACTGACGATTGTGAGGCC
GCAATCAACGAGCAGATCAATGTGGAATACAATGTCTCCTATGTGTATCA
TGCCATGTTTGCTTACTTTGACAGAGACAATGTCGCGCTCAAGGGTCTCG
CCAAGTTTTTCAAGGAATCAAGTGAAGAGGAAAGAGAGCATGCTGAGAAA
TTGATGGAATATCAGAACAAACGAGGAGGTAAAGTGAAGCTGCAATCAAT
ATTGATGCCTCTCTCTGAGTTTGATCATGCTGAGAAAGGAGATGCTTTGT
ATGCCATGGAGCTTACGCTGTCTCTGGAGAAGCTAACAAATGAGAAACTC
CTCAACTTGCACAAGGTGGCCAACAAGAACAATGATGTGCAGTTGGCAGA
TTTCGTTGAAAGCAAGTATTTACACGAGCAGGTAGAAGCCATCAAAAAGA
TATCTGAATATGTTGCTCAGCTGAGAAGAGTTGGNCAGGGGCATGGTGTC
TGGCACTTTGATCAAANNNTGCTCCA
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