CK933993

Overview
NameCK933993
Unique NameCK933993
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length876
Libraries
Library NameType
Developing fruit peel at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK933993 vs. ExPASy Swiss-Prot
Match: FRIMS_PAGBE (Ferritin, spleen middle subunit OS=Pagothenia bernacchii PE=1 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 3.772e-20
Identity = 55/157 (35.03%), Postives = 80/157 (50.96%), Query Frame = 2
Query:  362 SLARHKFTDDCEAAINEQINVEYNVSYVYHAMFAYFDRDNVALKGLXXXXXXXXXXXXXXXXKLMEYQNKRGGKVKLQSILMPLSEFDHAEKGDALYAMEXXXXXXXXXXXXXXXXHKVANKNNDVQLADFVESKYLHEQVEAIKKISEYVAQLRRV 832
            S  R  +  DCEAA+N  IN+E   SY Y +M  YF RD+VAL G                 KL+ +QN RGG++ LQ I  P    +  E G+ +  M+                HK+A+   D  + DF+E+ YL+EQVE+IKK+ +++  L R+
Sbjct:    3 SQVRQNYHRDCEAAVNRMINMELFASYSYTSMAFYFSRDDVALPGFAHFFKENSDEEREHADKLLTFQNSRGGRIFLQDIKKP----ERDEWGNGVDVMQCALQLEKNVNQALLDLHKIASGKVDPHMCDFLETHYLNEQVESIKKLGDFITNLSRM 155          
BLAST of CK933993 vs. ExPASy Swiss-Prot
Match: FTMT_MOUSE (Ferritin, mitochondrial OS=Mus musculus GN=Ftmt PE=2 SV=2)

HSP 1 Score: 97.4413 bits (241), Expect = 1.098e-19
Identity = 62/158 (39.24%), Postives = 82/158 (51.90%), Query Frame = 2
Query:  362 SLARHKFTDDCEAAINEQINVEYNVSYVYHAMFAYFDRDNVALKGLXXXXXXXXXXXXXXXXKLMEYQNKRGGKVKLQSILMPLSEFDHAEKGDALYAMEXXXXXXXXXXXXXXXXHKVANKNNDVQLADFVESKYLHEQVEAIKKISEYVAQLRRVG 835
            S  R  F  D EAAIN QIN+E   SYVY +M  YF RD+VAL                   KLM+ QN+RGG++ LQ I  P  + D  E G  L AME                H +A++  D  L DF+E+ YLHEQV++IK++ ++V  L  +G
Sbjct:   62 SRVRQNFHPDSEAAINRQINLELYASYVYLSMAYYFSRDDVALYNFSKYFLRQSLEEREHAEKLMKLQNQRGGRICLQDIKKP--DKDDWECG--LRAMECALLLEKNVNQSLLDLHTLASEKGDPHLCDFLETHYLHEQVKSIKELGDHVHNLVTMG 215          
BLAST of CK933993 vs. ExPASy Swiss-Prot
Match: FTMT_BOVIN (Ferritin, mitochondrial OS=Bos taurus GN=FTMT PE=2 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 5.447e-19
Identity = 63/174 (36.21%), Postives = 84/174 (48.28%), Query Frame = 2
Query:  362 SLARHKFTDDCEAAINEQINVEYNVSYVYHAMFAYFDRDNVALKGLXXXXXXXXXXXXXXXXKLMEYQNKRGGKVKLQSILMPLSEFDHAEKGDALYAMEXXXXXXXXXXXXXXXXHKVANKNNDVQLADFVESKYLHEQVEAIKKISEYVAQLRRVG---QGHGVWHFDQXXL 874
            S  R  F  D EAAIN QIN+E   SYVY +M  YF RD+VAL                   KLM  QN+RGG + LQ I  P    D  +    L AME                H +A+   D  L DF+E+ YL+EQV++IK++ ++V  L ++G    G   + FD+  L
Sbjct:   66 SRVRQNFHPDSEAAINRQINLELYASYVYLSMAYYFSRDDVALHNFARYFLRLSREEAEHAEKLMRLQNQRGGLICLQDIKKP----DQNDWKSGLNAMECALLLEKNVNQSLLELHTLASDKGDPHLCDFLETHYLNEQVKSIKELGDHVNNLVKMGAPESGLAEYLFDKHTL 235          
BLAST of CK933993 vs. ExPASy Swiss-Prot
Match: FHL17_HUMAN (Ferritin heavy polypeptide-like 17 OS=Homo sapiens GN=FTHL17 PE=2 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 2.070e-18
Identity = 59/159 (37.11%), Postives = 80/159 (50.31%), Query Frame = 2
Query:  356 QLSLARHKFTDDCEAAINEQINVEYNVSYVYHAMFAYFDRDNVALKGLXXXXXXXXXXXXXXXXKLMEYQNKRGGKVKLQSILMPLSEFDHAEKGDALYAMEXXXXXXXXXXXXXXXXHKVANKNNDVQLADFVESKYLHEQVEAIKKISEYVAQLRRV 832
            Q S  R K+  +C+AAIN  I +E   SY+Y +M  YF+RD+VAL+                  KLM  QN RGG + L  I  P  E    E G  L AME                +++A +  D QL  F+ES YLHEQV+ IK++  YV+ LR++
Sbjct:    5 QPSQVRQKYDTNCDAAINSHITLELYTSYLYLSMAFYFNRDDVALENFFRYFLRLSDDKMEHAQKLMRLQNLRGGHICLHDIRKP--ECQGWESG--LVAMESAFHLEKNVNQSLLDLYQLAVEKGDPQLCHFLESHYLHEQVKTIKELGGYVSNLRKI 159          
BLAST of CK933993 vs. ExPASy Swiss-Prot
Match: FRIL_XENLA (Ferritin light chain, oocyte isoform OS=Xenopus laevis PE=1 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 3.531e-18
Identity = 55/174 (31.61%), Postives = 86/174 (49.43%), Query Frame = 2
Query:  362 SLARHKFTDDCEAAINEQINVEYNVSYVYHAMFAYFDRDNVALKGLXXXXXXXXXXXXXXXXKLMEYQNKRGGKVKLQSILMPLSEFDHAEKGDALYAMEXXXXXXXXXXXXXXXXHKVANKNNDVQLADFVESKYLHEQVEAIKKISEYVAQLRRV---GQGHGVWHFDQXXL 874
            S  R  + ++ EA +N   N+E   SY+Y ++  YFDRD+VAL                     +++QNKRGG+V LQ +  P    D  E G+   AME                HK+A  + D  + D++E ++L E+V+ IKK+ +++  LRRV    +G G + FD+  L
Sbjct:    5 SQIRQNYHEESEAGVNRIANLELQASYLYLSVGYYFDRDDVALSKFSKFFRELSEKKRDHAEDFLKFQNKRGGRVVLQDVKKP----DDDEWGNGTKAMEVALNLEKSINQAVLDLHKIATDHTDPHMQDYLEHEFLEEEVKLIKKLGDHLTNLRRVKAAEEGMGEYLFDKLTL 174          
BLAST of CK933993 vs. ExPASy Swiss-Prot
Match: FRIL1_MOUSE (Ferritin light chain 1 OS=Mus musculus GN=Ftl1 PE=1 SV=2)

HSP 1 Score: 87.0409 bits (214), Expect = 1.483e-16
Identity = 49/157 (31.21%), Postives = 76/157 (48.41%), Query Frame = 2
Query:  362 SLARHKFTDDCEAAINEQINVEYNVSYVYHAMFAYFDRDNVALKGLXXXXXXXXXXXXXXXXKLMEYQNKRGGKVKLQSILMPLSEFDHAEKGDALYAMEXXXXXXXXXXXXXXXXHKVANKNNDVQLADFVESKYLHEQVEAIKKISEYVAQLRRV 832
            S  R  ++ + EAA+N  +N+    SY Y ++  +FDRD+VAL+G+                +L+E+QN RGG+   Q +  P  +    E G    AME                H + +   D  L DF+ES YL ++V+ IKK+  ++  LRRV
Sbjct:    3 SQIRQNYSTEVEAAVNRLVNLHLRASYTYLSLGFFFDRDDVALEGVGHFFRELAEEKREGAERLLEFQNDRGGRALFQDVQKPSQD----EWGKTQEAMEAALAMEKNLNQALLDLHALGSARTDPHLCDFLESHYLDKEVKLIKKMGNHLTNLRRV 155          
BLAST of CK933993 vs. ExPASy Swiss-Prot
Match: FRIL_RABIT (Ferritin light chain OS=Oryctolagus cuniculus GN=FTL PE=2 SV=2)

HSP 1 Score: 85.8853 bits (211), Expect = 3.305e-16
Identity = 46/157 (29.30%), Postives = 79/157 (50.32%), Query Frame = 2
Query:  362 SLARHKFTDDCEAAINEQINVEYNVSYVYHAMFAYFDRDNVALKGLXXXXXXXXXXXXXXXXKLMEYQNKRGGKVKLQSILMPLSEFDHAEKGDALYAMEXXXXXXXXXXXXXXXXHKVANKNNDVQLADFVESKYLHEQVEAIKKISEYVAQLRRV 832
            S  R  ++ + EAA+N  +N+    SY Y ++  YFDRD+VAL+G+                +L++ QN+RGG+   Q +  P  +    E G  L AME                H + + + D  L DF+E+ +L E+V+ +KK+ +++  +RR+
Sbjct:    3 SQIRQNYSPEVEAAVNHLVNLHLRASYTYLSLGFYFDRDDVALEGVSHFFRELAEEKREAAERLLKMQNQRGGRALFQDVQKPSQD----EWGKTLNAMEAALALEKNLNQALLDLHALGSAHTDPHLCDFLENHFLDEEVKLLKKMGDHLTNIRRL 155          
BLAST of CK933993 vs. ExPASy Swiss-Prot
Match: FRIL_PONAB (Ferritin light chain OS=Pongo abelii GN=FTL PE=2 SV=3)

HSP 1 Score: 85.5001 bits (210), Expect = 4.316e-16
Identity = 52/174 (29.89%), Postives = 85/174 (48.85%), Query Frame = 2
Query:  362 SLARHKFTDDCEAAINEQINVEYNVSYVYHAMFAYFDRDNVALKGLXXXXXXXXXXXXXXXXKLMEYQNKRGGKVKLQSILMPLSEFDHAEKGDALYAMEXXXXXXXXXXXXXXXXHKVANKNNDVQLADFVESKYLHEQVEAIKKISEYVAQLRRVG---QGHGVWHFDQXXL 874
            S  R  ++ D EAA+N  +N+    SY Y ++  YFDRD+VAL+G+                +L++ QN+RGG+   Q I  P  +    E G    AM+                H + + + D  L DF+E+ +L E+V+ IKK+ +++  L R+G    G G + F++  L
Sbjct:    3 SQIRQNYSTDVEAAVNSLVNMYLQASYTYLSLGFYFDRDDVALEGVSHFFRELAEEKREGYERLLKMQNQRGGRALFQDIKKPAED----EWGKTPDAMKAAMALEKKLNQALLDLHALGSAHTDPHLCDFLETHFLDEEVKLIKKMGDHLTNLHRLGGPEAGLGEYLFERLTL 172          
BLAST of CK933993 vs. ExPASy Swiss-Prot
Match: FRIL1_RAT (Ferritin light chain 1 OS=Rattus norvegicus GN=Ftl1 PE=1 SV=3)

HSP 1 Score: 85.5001 bits (210), Expect = 4.316e-16
Identity = 48/157 (30.57%), Postives = 77/157 (49.04%), Query Frame = 2
Query:  362 SLARHKFTDDCEAAINEQINVEYNVSYVYHAMFAYFDRDNVALKGLXXXXXXXXXXXXXXXXKLMEYQNKRGGKVKLQSILMPLSEFDHAEKGDALYAMEXXXXXXXXXXXXXXXXHKVANKNNDVQLADFVESKYLHEQVEAIKKISEYVAQLRRV 832
            S  R  ++ + EAA+N  +N+    SY Y ++  +FDRD+VAL+G+                +L++ QN+RGG+   Q +  P  +    E G  L AME                H + +   D  L DF+ES +L ++V+ IKK+  ++  LRRV
Sbjct:    3 SQIRQNYSTEVEAAVNRLVNLHLRASYTYLSLGFFFDRDDVALEGVGHFFRELAEEKREGAERLLKLQNERGGRALFQDVQKPSQD----EWGKTLEAMEAALALEKNLNQALLDLHALGSARTDPHLCDFLESHFLDKEVKLIKKMGNHLTNLRRV 155          
BLAST of CK933993 vs. ExPASy Swiss-Prot
Match: FRIL_HUMAN (Ferritin light chain OS=Homo sapiens GN=FTL PE=1 SV=2)

HSP 1 Score: 85.1149 bits (209), Expect = 5.637e-16
Identity = 52/174 (29.89%), Postives = 84/174 (48.28%), Query Frame = 2
Query:  362 SLARHKFTDDCEAAINEQINVEYNVSYVYHAMFAYFDRDNVALKGLXXXXXXXXXXXXXXXXKLMEYQNKRGGKVKLQSILMPLSEFDHAEKGDALYAMEXXXXXXXXXXXXXXXXHKVANKNNDVQLADFVESKYLHEQVEAIKKISEYVAQLRRVG---QGHGVWHFDQXXL 874
            S  R  ++ D EAA+N  +N+    SY Y ++  YFDRD+VAL+G+                +L++ QN+RGG+   Q I  P  +    E G    AM+                H + +   D  L DF+E+ +L E+V+ IKK+ +++  L R+G    G G + F++  L
Sbjct:    3 SQIRQNYSTDVEAAVNSLVNLYLQASYTYLSLGFYFDRDDVALEGVSHFFRELAEEKREGYERLLKMQNQRGGRALFQDIKKPAED----EWGKTPDAMKAAMALEKKLNQALLDLHALGSARTDPHLCDFLETHFLDEEVKLIKKMGDHLTNLHRLGGPEAGLGEYLFERLTL 172          
The following BLAST results are available for this feature:
BLAST of CK933993 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 66
Match NameE-valueIdentityDescription
FRIMS_PAGBE3.772e-2035.03Ferritin, spleen middle subunit OS=Pagothenia bern... [more]
FTMT_MOUSE1.098e-1939.24Ferritin, mitochondrial OS=Mus musculus GN=Ftmt PE... [more]
FTMT_BOVIN5.447e-1936.21Ferritin, mitochondrial OS=Bos taurus GN=FTMT PE=2... [more]
FHL17_HUMAN2.070e-1837.11Ferritin heavy polypeptide-like 17 OS=Homo sapiens... [more]
FRIL_XENLA3.531e-1831.61Ferritin light chain, oocyte isoform OS=Xenopus la... [more]
FRIL1_MOUSE1.483e-1631.21Ferritin light chain 1 OS=Mus musculus GN=Ftl1 PE=... [more]
FRIL_RABIT3.305e-1629.30Ferritin light chain OS=Oryctolagus cuniculus GN=F... [more]
FRIL_PONAB4.316e-1629.89Ferritin light chain OS=Pongo abelii GN=FTL PE=2 S... [more]
FRIL1_RAT4.316e-1630.57Ferritin light chain 1 OS=Rattus norvegicus GN=Ftl... [more]
FRIL_HUMAN5.637e-1629.89Ferritin light chain OS=Homo sapiens GN=FTL PE=1 S... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004542_G04 Developing fruit peel at 38 DAFB Citrus sinensis cDNA clone P38DAB10001_IVF_G04 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK933993 ID=CK933993; Name=CK933993; organism=Citrus sinensis; type=EST; length=876bp
GGGGAACCCTCACAGCCTCACAGCCACCGTTGCGTTTCACTTCATTTGCT
CCTCTTTTCAAATCTTTTTGTCCTCGAAATCCGTCAACAAAAACATTTGA
AAACAAAAAATGTTGCTCAAAGCATCTTCAGCTTTATCGCTCGTGAGCCC
CCAAAAGGAGGCTCTAAATCCTCTGTTTTCCTCTGTTTCTTCAGCCTTTC
CGCCGAAACCGAGTCTCCGTTTTTCTTCACCGAAAAACGATAACGGCGTG
GTGGTCTGCGCCTCTAAAAATGCTAACAACAGCCCTTTAACCGGCGTCAT
TTTTGCTCCCTTTGAAGAGGTGAAAAAGGAGCTCGATTTGGTCCCAACTG
TGCCTCAACTGTCTCTTGCCAGACACAAGTTCACTGACGATTGTGAGGCC
GCAATCAACGAGCAGATCAATGTGGAATACAATGTCTCCTATGTGTATCA
TGCCATGTTTGCTTACTTTGACAGAGACAATGTCGCGCTCAAGGGTCTCG
CCAAGTTTTTCAAGGAATCAAGTGAAGAGGAAAGAGAGCATGCTGAGAAA
TTGATGGAATATCAGAACAAACGAGGAGGTAAAGTGAAGCTGCAATCAAT
ATTGATGCCTCTCTCTGAGTTTGATCATGCTGAGAAAGGAGATGCTTTGT
ATGCCATGGAGCTTACGCTGTCTCTGGAGAAGCTAACAAATGAGAAACTC
CTCAACTTGCACAAGGTGGCCAACAAGAACAATGATGTGCAGTTGGCAGA
TTTCGTTGAAAGCAAGTATTTACACGAGCAGGTAGAAGCCATCAAAAAGA
TATCTGAATATGTTGCTCAGCTGAGAAGAGTTGGNCAGGGGCATGGTGTC
TGGCACTTTGATCAAANNNTGCTCCA
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