CK933993

Overview
NameCK933993
Unique NameCK933993
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length876
Libraries
Library NameType
Developing fruit peel at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig8420 contig Csv1_Contig8420:1..864. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CK933993 vs. ExPASy Swiss-Prot
Match: FRIL_CANFA (Ferritin light chain OS=Canis familiaris GN=FTL PE=2 SV=3)

HSP 1 Score: 85.1149 bits (209), Expect = 5.637e-16
Identity = 51/174 (29.31%), Postives = 84/174 (48.28%), Query Frame = 2
Query:  362 SLARHKFTDDCEAAINEQINVEYNVSYVYHAMFAYFDRDNVALKGLXXXXXXXXXXXXXXXXKLMEYQNKRGGKVKLQSILMPLSEFDHAEKGDALYAMEXXXXXXXXXXXXXXXXHKVANKNNDVQLADFVESKYLHEQVEAIKKISEYVAQLRRVG---QGHGVWHFDQXXL 874
            S  R  ++ + EAA+N  +N+    SY Y ++  YFDRD+VAL+G+                + ++ QN+RGG+   Q +  P  +    E G  L AME                H + +   D  L DF+E+ +L E+V+ IKK+ +++  LRR+     G G + F++  L
Sbjct:    3 SQIRQNYSTEVEAAVNRLVNMHLRASYTYLSLGFYFDRDDVALEGVGHFFRELAEEKREGAERFLKMQNQRGGRALFQDVQKPSQD----EWGKTLDAMEAALLLEKSLNQALLDLHALGSARADPHLCDFLENHFLDEEVKLIKKMGDHLTNLRRLATPQAGLGEYLFERLTL 172          
BLAST of CK933993 vs. ExPASy Swiss-Prot
Match: FRIL_BOVIN (Ferritin light chain OS=Bos taurus GN=FTL PE=2 SV=3)

HSP 1 Score: 83.5741 bits (205), Expect = 1.640e-15
Identity = 50/174 (28.74%), Postives = 85/174 (48.85%), Query Frame = 2
Query:  362 SLARHKFTDDCEAAINEQINVEYNVSYVYHAMFAYFDRDNVALKGLXXXXXXXXXXXXXXXXKLMEYQNKRGGKVKLQSILMPLSEFDHAEKGDALYAMEXXXXXXXXXXXXXXXXHKVANKNNDVQLADFVESKYLHEQVEAIKKISEYVAQLRRVG---QGHGVWHFDQXXL 874
            S  R  ++ + EAA+N  +N++   SY Y ++  YFDRD+VAL+G+                +L++ QN+RGG+     +  P  +    E G    AME                H +A+   D  + DF+E+ +L E+V+ IKK+ +++  LRR+     G G + F++  L
Sbjct:    3 SQIRQNYSTEVEAAVNRLVNMQLRASYTYLSLGFYFDRDDVALEGVGHFFRELAKEKREGAERLLKLQNQRGGRALFLDVQKPSQD----EWGKTQDAMEAALLVEKNLNQALLDLHGLASARGDPHICDFLENHFLDEEVKLIKKMGDHLTNLRRLAGPQAGLGEYLFERLTL 172          
BLAST of CK933993 vs. ExPASy Swiss-Prot
Match: FRIL_FELCA (Ferritin light chain OS=Felis catus GN=FTL PE=2 SV=3)

HSP 1 Score: 83.1889 bits (204), Expect = 2.142e-15
Identity = 47/157 (29.94%), Postives = 77/157 (49.04%), Query Frame = 2
Query:  362 SLARHKFTDDCEAAINEQINVEYNVSYVYHAMFAYFDRDNVALKGLXXXXXXXXXXXXXXXXKLMEYQNKRGGKVKLQSILMPLSEFDHAEKGDALYAMEXXXXXXXXXXXXXXXXHKVANKNNDVQLADFVESKYLHEQVEAIKKISEYVAQLRRV 832
            S  R  ++ + EAA+N  +N+    SY Y ++  YFDRD+VAL+G+                +L++ QN+RGG+     +  P  +    E G  L AME                H + +   D  L DF+E+ +L E+V+ IKK+ +++  LRR+
Sbjct:    3 SQIRQNYSTEVEAAVNRLVNMHLRASYTYLSLGFYFDRDDVALEGVGHFFRELAEEKREGAERLLKMQNQRGGRALFLDVQKPSQD----EWGKTLDAMEAALLLEKNLNQGLLDLHALGSARADPHLCDFLENHFLDEEVKLIKKMGDHLTNLRRL 155          
BLAST of CK933993 vs. ExPASy Swiss-Prot
Match: FRIL2_MOUSE (Ferritin light chain 2 OS=Mus musculus GN=Ftl2 PE=2 SV=2)

HSP 1 Score: 82.8037 bits (203), Expect = 2.798e-15
Identity = 46/157 (29.30%), Postives = 77/157 (49.04%), Query Frame = 2
Query:  362 SLARHKFTDDCEAAINEQINVEYNVSYVYHAMFAYFDRDNVALKGLXXXXXXXXXXXXXXXXKLMEYQNKRGGKVKLQSILMPLSEFDHAEKGDALYAMEXXXXXXXXXXXXXXXXHKVANKNNDVQLADFVESKYLHEQVEAIKKISEYVAQLRRV 832
            S  R  ++ + EAA+N  +N+    SY Y ++  +FDRD+VAL+G+                +L++ QN+RGG+   Q +  P  +    E G  L A++                H + +   D  L DF+ES +L ++V+ IKK+  ++  LRRV
Sbjct:    3 SQIRQNYSTEVEAAVNRLVNLHLRASYTYLSLGFFFDRDDVALEGVGHFFRELAEEKREGAERLLKLQNERGGRALFQDVQKPSQD----EWGKTLEAIQAALRLEKNLNQALLDLHALGSARTDPHLCDFLESHFLDKEVKLIKKMGNHLTNLRRV 155          
BLAST of CK933993 vs. ExPASy Swiss-Prot
Match: FRIL_HORSE (Ferritin light chain OS=Equus caballus GN=FTL PE=1 SV=4)

HSP 1 Score: 82.4185 bits (202), Expect = 3.654e-15
Identity = 49/167 (29.34%), Postives = 82/167 (49.10%), Query Frame = 2
Query:  362 SLARHKFTDDCEAAINEQINVEYNVSYVYHAMFAYFDRDNVALKGLXXXXXXXXXXXXXXXXKLMEYQNKRGGKVKLQSILMPLSEFDHAEKGDALYAMEXXXXXXXXXXXXXXXXHKVANKNNDVQLADFVESKYLHEQVEAIKKISEYVAQLRR-VGQGHGVWHF 859
            S  R  ++ + EAA+N  +N+    SY Y ++  YFDRD+VAL+G+                +L++ QN+RGG+   Q +  P  +    E G  L AM+                H + +   D  L DF+ES +L E+V+ IKK+ +++  ++R VG   G+  +
Sbjct:    3 SQIRQNYSTEVEAAVNRLVNLYLRASYTYLSLGFYFDRDDVALEGVCHFFRELAEEKREGAERLLKMQNQRGGRALFQDLQKPSQD----EWGTTLDAMKAAIVLEKSLNQALLDLHALGSAQADPHLCDFLESHFLDEEVKLIKKMGDHLTNIQRLVGSQAGLGEY 165          
BLAST of CK933993 vs. ExPASy Swiss-Prot
Match: FHL17_MOUSE (Ferritin heavy polypeptide-like 17 OS=Mus musculus GN=Fthl17 PE=2 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 3.420e-13
Identity = 48/148 (32.43%), Postives = 65/148 (43.92%), Query Frame = 2
Query:  392 CEAAINEQINVEYNVSYVYHAMFAYFDRDNVALKGLXXXXXXXXXXXXXXXXKLMEYQNKRGGKVKLQSILMPLSEFDHAEKGDALYAMEXXXXXXXXXXXXXXXXHKVANKNNDVQLADFVESKYLHEQVEAIKKISEYVAQLRRVG 835
            CE AIN  I +    SY Y +M  YFDRD+VA +                    M  QNKRGG + LQ I  P  +  H        AME                H+VA +  D  L  F+E   L +QV+ +K++S Y+  LR++G
Sbjct:   16 CEDAINTHIQLCLYASYEYMSMAVYFDRDDVAQENFKRFFLTKSHNCQTSAEMFMHLQNKRGGCISLQDIARPERDSWHG----GFQAMECAFHMEMLINQSLLNMHEVAKEKGDPHLCHFLEQNCLDQQVDILKEMSGYLTNLRQMG 159          
The following BLAST results are available for this feature:
BLAST of CK933993 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 66
Match NameE-valueIdentityDescription
FRIL_CANFA5.637e-1629.31Ferritin light chain OS=Canis familiaris GN=FTL PE... [more]
FRIL_BOVIN1.640e-1528.74Ferritin light chain OS=Bos taurus GN=FTL PE=2 SV=... [more]
FRIL_FELCA2.142e-1529.94Ferritin light chain OS=Felis catus GN=FTL PE=2 SV... [more]
FRIL2_MOUSE2.798e-1529.30Ferritin light chain 2 OS=Mus musculus GN=Ftl2 PE=... [more]
FRIL_HORSE3.654e-1529.34Ferritin light chain OS=Equus caballus GN=FTL PE=1... [more]
FHL17_MOUSE3.420e-1332.43Ferritin heavy polypeptide-like 17 OS=Mus musculus... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004542_G04 Developing fruit peel at 38 DAFB Citrus sinensis cDNA clone P38DAB10001_IVF_G04 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK933993 ID=CK933993; Name=CK933993; organism=Citrus sinensis; type=EST; length=876bp
GGGGAACCCTCACAGCCTCACAGCCACCGTTGCGTTTCACTTCATTTGCT
CCTCTTTTCAAATCTTTTTGTCCTCGAAATCCGTCAACAAAAACATTTGA
AAACAAAAAATGTTGCTCAAAGCATCTTCAGCTTTATCGCTCGTGAGCCC
CCAAAAGGAGGCTCTAAATCCTCTGTTTTCCTCTGTTTCTTCAGCCTTTC
CGCCGAAACCGAGTCTCCGTTTTTCTTCACCGAAAAACGATAACGGCGTG
GTGGTCTGCGCCTCTAAAAATGCTAACAACAGCCCTTTAACCGGCGTCAT
TTTTGCTCCCTTTGAAGAGGTGAAAAAGGAGCTCGATTTGGTCCCAACTG
TGCCTCAACTGTCTCTTGCCAGACACAAGTTCACTGACGATTGTGAGGCC
GCAATCAACGAGCAGATCAATGTGGAATACAATGTCTCCTATGTGTATCA
TGCCATGTTTGCTTACTTTGACAGAGACAATGTCGCGCTCAAGGGTCTCG
CCAAGTTTTTCAAGGAATCAAGTGAAGAGGAAAGAGAGCATGCTGAGAAA
TTGATGGAATATCAGAACAAACGAGGAGGTAAAGTGAAGCTGCAATCAAT
ATTGATGCCTCTCTCTGAGTTTGATCATGCTGAGAAAGGAGATGCTTTGT
ATGCCATGGAGCTTACGCTGTCTCTGGAGAAGCTAACAAATGAGAAACTC
CTCAACTTGCACAAGGTGGCCAACAAGAACAATGATGTGCAGTTGGCAGA
TTTCGTTGAAAGCAAGTATTTACACGAGCAGGTAGAAGCCATCAAAAAGA
TATCTGAATATGTTGCTCAGCTGAGAAGAGTTGGNCAGGGGCATGGTGTC
TGGCACTTTGATCAAANNNTGCTCCA
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