CK934000

Overview
NameCK934000
Unique NameCK934000
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length720
Libraries
Library NameType
Developing fruit peel at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK934000 vs. ExPASy Swiss-Prot
Match: CFAD_DICDI (Counting factor associated protein D OS=Dictyostelium discoideum GN=cfaD PE=1 SV=1)

HSP 1 Score: 109.383 bits (272), Expect = 2.011e-23
Identity = 53/129 (41.09%), Postives = 81/129 (62.79%), Query Frame = 2
Query:    5 YTGKDGVCKFSSENV-GVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEV-VDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKMEMG-KNMCGIATCASYPV 382
            Y  ++G+C+  +    GV +   VN+T G+E  LQ+A+    PV++A +  VD FR+Y SGVY++  C N   D++H V+A+GYG   G  Y+L+KNSW  NWG  GY  M     N+CG+++ A+YP+
Sbjct:  399 YLMQNGLCRDRTVTPSGVSITGYVNVTSGSESALQNAIATTGPVAIAIDASVDDFRYYMSGVYNNPACKNGLDDLDHEVLAIGYGTYQGQDYFLVKNSWSTNWGMDGYVYMARNDNNLCGVSSQATYPI 527          
BLAST of CK934000 vs. ExPASy Swiss-Prot
Match: CATJ_RAT (Cathepsin J OS=Rattus norvegicus GN=Ctsj PE=2 SV=2)

HSP 1 Score: 108.227 bits (269), Expect = 4.479e-23
Identity = 62/131 (47.33%), Postives = 76/131 (58.02%), Query Frame = 2
Query:    5 YTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEVV-DGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVE----DGVPYWLIKNSWGENWGDHGYFKMEMGK-NMCGIATCASYP 379
            Y GKDG C++ SEN    +   VN+    E  L  AV  + PVS A +   D FRFY  GVY    C +    VNHAV+ VGYG E    DG  YWLIKNSWGE WG +G+ K+   + N CGIA+ AS+P
Sbjct:  204 YEGKDGPCRYHSENASANITGFVNLPPN-ELYLWVAVASIGPVSAAIDASHDSFRFYSGGVYHEPNCSSYV--VNHAVLVVGYGFEGNETDGNNYWLIKNSWGEEWGINGFMKIAKDRNNHCGIASQASFP 331          
BLAST of CK934000 vs. ExPASy Swiss-Prot
Match: CATS_MOUSE (Cathepsin S OS=Mus musculus GN=Ctss PE=2 SV=1)

HSP 1 Score: 107.842 bits (268), Expect = 5.850e-23
Identity = 57/129 (44.19%), Postives = 71/129 (55.04%), Query Frame = 2
Query:    5 YTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEVV-DGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKM-EMGKNMCGIATCASYPVV 385
            Y   D  C ++S+N        + +  G ED L+ AV    PVSV  +     F FYKSGVY    C     +VNH V+ VGYG  DG  YWL+KNSWG N+GD GY +M    KN CGIA+  SYP +
Sbjct:  215 YKATDEKCHYNSKNRAATCSRYIQLPFGDEDALKEAVATKGPVSVGIDASHSSFFFYKSGVYDDPSCTG---NVNHGVLVVGYGTLDGKDYWLVKNSWGLNFGDQGYIRMARNNKNHCGIASYCSYPEI 340          
BLAST of CK934000 vs. ExPASy Swiss-Prot
Match: CATK_PIG (Cathepsin K OS=Sus scrofa GN=CTSK PE=2 SV=1)

HSP 1 Score: 107.842 bits (268), Expect = 5.850e-23
Identity = 56/127 (44.09%), Postives = 74/127 (58.27%), Query Frame = 2
Query:    5 YTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEV-VDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKMEMGK-NMCGIATCASYP 379
            Y G+D  C ++      +      I  G E  L+ AV  V PVSVA +  +  F+FY  GVY    C +   ++NHAV+AVGYG++ G  +W+IKNSWGENWG+ GY  M   K N CGIA  AS+P
Sbjct:  204 YVGQDENCMYNPTGKAAKCRGYREIPEGNEKALKRAVARVGPVSVAIDASLTSFQFYSKGVYYDENCNSD--NLNHAVLAVGYGIQKGKKHWIIKNSWGENWGNKGYILMARNKNNACGIANLASFP 328          
BLAST of CK934000 vs. ExPASy Swiss-Prot
Match: CATK_BOVIN (Cathepsin K OS=Bos taurus GN=CTSK PE=2 SV=2)

HSP 1 Score: 107.842 bits (268), Expect = 5.850e-23
Identity = 55/127 (43.31%), Postives = 75/127 (59.06%), Query Frame = 2
Query:    5 YTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEV-VDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKMEMGK-NMCGIATCASYP 379
            Y G+D  C ++      +      I  G E  L+ AV  V P+SVA +  +  F+FY+ GVY    C +   ++NHAV+AVGYG++ G  +W+IKNSWGENWG+ GY  M   K N CGIA  AS+P
Sbjct:  203 YVGQDENCMYNPTGKAAKCRGYREIPEGNEKALKRAVARVGPISVAIDASLTSFQFYRKGVYYDENCNSD--NLNHAVLAVGYGIQKGNKHWIIKNSWGENWGNKGYILMARNKNNACGIANLASFP 327          
BLAST of CK934000 vs. ExPASy Swiss-Prot
Match: CATK_CANFA (Cathepsin K OS=Canis familiaris GN=CTSK PE=2 SV=1)

HSP 1 Score: 107.457 bits (267), Expect = 7.640e-23
Identity = 55/127 (43.31%), Postives = 74/127 (58.27%), Query Frame = 2
Query:    5 YTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEV-VDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKMEMGK-NMCGIATCASYP 379
            Y G+D  C ++      +      I  G E  L+ AV  V P+SVA +  +  F+FY  GVY    C +   ++NHAV+AVGYG++ G  +W+IKNSWGENWG+ GY  M   K N CGIA  AS+P
Sbjct:  204 YVGQDESCMYNPTGKAAKCRGYREIPEGNEKALKRAVARVGPISVAIDASLTSFQFYSKGVYYDENCNSD--NLNHAVLAVGYGIQKGNKHWIIKNSWGENWGNKGYILMARNKNNACGIANLASFP 328          
BLAST of CK934000 vs. ExPASy Swiss-Prot
Match: CATK_RABIT (Cathepsin K OS=Oryctolagus cuniculus GN=CTSK PE=1 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 9.978e-23
Identity = 56/127 (44.09%), Postives = 74/127 (58.27%), Query Frame = 2
Query:    5 YTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEV-VDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKMEMGK-NMCGIATCASYP 379
            Y G+D  C ++      +      I  G E  L+ AV  V PVSVA +  +  F+FY  GVY    C +   +VNHAV+AVGYG++ G  +W+IKNSWGE+WG+ GY  M   K N CGIA  AS+P
Sbjct:  203 YVGQDESCMYNPTGKAAKCRGYREIPEGNEKALKRAVARVGPVSVAIDASLTSFQFYSKGVYYDENCSSD--NVNHAVLAVGYGIQKGNKHWIIKNSWGESWGNKGYILMARNKNNACGIANLASFP 327          
BLAST of CK934000 vs. ExPASy Swiss-Prot
Match: CATK_MACMU (Cathepsin K OS=Macaca mulatta GN=CTSK PE=1 SV=1)

HSP 1 Score: 106.301 bits (264), Expect = 1.702e-22
Identity = 55/127 (43.31%), Postives = 74/127 (58.27%), Query Frame = 2
Query:    5 YTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEV-VDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKMEMGK-NMCGIATCASYP 379
            Y G++  C ++      +      I  G E  L+ AV  V PVSVA +  +  F+FY  GVY    C +   ++NHAV+AVGYG++ G  +W+IKNSWGENWG+ GY  M   K N CGIA  AS+P
Sbjct:  203 YVGQEESCMYNPTGKAAKCRGYREIPEGNEKALKRAVARVGPVSVAIDASLTSFQFYSKGVYYDESCNSD--NLNHAVLAVGYGIQKGNKHWIIKNSWGENWGNKGYILMARNKNNACGIANLASFP 327          
BLAST of CK934000 vs. ExPASy Swiss-Prot
Match: CATK_MACFA (Cathepsin K OS=Macaca fascicularis GN=CTSK PE=2 SV=1)

HSP 1 Score: 106.301 bits (264), Expect = 1.702e-22
Identity = 55/127 (43.31%), Postives = 74/127 (58.27%), Query Frame = 2
Query:    5 YTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEV-VDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKMEMGK-NMCGIATCASYP 379
            Y G++  C ++      +      I  G E  L+ AV  V PVSVA +  +  F+FY  GVY    C +   ++NHAV+AVGYG++ G  +W+IKNSWGENWG+ GY  M   K N CGIA  AS+P
Sbjct:  203 YVGQEESCMYNPTGKAAKCRGYREIPEGNEKALKRAVARVGPVSVAIDASLTSFQFYSKGVYYDESCNSD--NLNHAVLAVGYGIQKGNKHWIIKNSWGENWGNKGYILMARNKNNACGIANLASFP 327          
BLAST of CK934000 vs. ExPASy Swiss-Prot
Match: CATK_HUMAN (Cathepsin K OS=Homo sapiens GN=CTSK PE=1 SV=1)

HSP 1 Score: 106.301 bits (264), Expect = 1.702e-22
Identity = 55/127 (43.31%), Postives = 74/127 (58.27%), Query Frame = 2
Query:    5 YTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEV-VDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKMEMGK-NMCGIATCASYP 379
            Y G++  C ++      +      I  G E  L+ AV  V PVSVA +  +  F+FY  GVY    C +   ++NHAV+AVGYG++ G  +W+IKNSWGENWG+ GY  M   K N CGIA  AS+P
Sbjct:  203 YVGQEESCMYNPTGKAAKCRGYREIPEGNEKALKRAVARVGPVSVAIDASLTSFQFYSKGVYYDESCNSD--NLNHAVLAVGYGIQKGNKHWIIKNSWGENWGNKGYILMARNKNNACGIANLASFP 327          
The following BLAST results are available for this feature:
BLAST of CK934000 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 166
Match NameE-valueIdentityDescription
CFAD_DICDI2.011e-2341.09Counting factor associated protein D OS=Dictyostel... [more]
CATJ_RAT4.479e-2347.33Cathepsin J OS=Rattus norvegicus GN=Ctsj PE=2 SV=2[more]
CATS_MOUSE5.850e-2344.19Cathepsin S OS=Mus musculus GN=Ctss PE=2 SV=1[more]
CATK_PIG5.850e-2344.09Cathepsin K OS=Sus scrofa GN=CTSK PE=2 SV=1[more]
CATK_BOVIN5.850e-2343.31Cathepsin K OS=Bos taurus GN=CTSK PE=2 SV=2[more]
CATK_CANFA7.640e-2343.31Cathepsin K OS=Canis familiaris GN=CTSK PE=2 SV=1[more]
CATK_RABIT9.978e-2344.09Cathepsin K OS=Oryctolagus cuniculus GN=CTSK PE=1 ... [more]
CATK_MACMU1.702e-2243.31Cathepsin K OS=Macaca mulatta GN=CTSK PE=1 SV=1[more]
CATK_MACFA1.702e-2243.31Cathepsin K OS=Macaca fascicularis GN=CTSK PE=2 SV... [more]
CATK_HUMAN1.702e-2243.31Cathepsin K OS=Homo sapiens GN=CTSK PE=1 SV=1[more]

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Properties
Property NameValue
Genbank descriptionCGF1004542_F04 Developing fruit peel at 38 DAFB Citrus sinensis cDNA clone P38DAB10001_IVF_F04 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK934000 ID=CK934000; Name=CK934000; organism=Citrus sinensis; type=EST; length=720bp
GGGCTACACCGGAAAAGATGGTGTCTGCAAATTCTCATCTGAAAATGTTG
GCGTCCAAGTCCTGGACTCAGTCAACATTACCTTGGGTGCTGAAGATGAA
TTACAGCATGCAGTTGGTCTTGTTCGACCTGTGAGTGTGGCATTTGAAGT
AGTAGATGGATTCCGATTTTACAAGAGTGGAGTTTACAGCAGCACTAAAT
GTGGAAATACTCCCATGGATGTGAACCATGCCGTCGTTGCTGTTGGGTAC
GGAGTTGAAGATGGTGTTCCATATTGGCTGATTAAGAACTCTTGGGGAGA
GAACTGGGGCGATCATGGCTACTTTAAGATGGAGATGGGGAAGAACATGT
GTGGTATTGCAACTTGTGCATCATACCCAGTTGTGGCTTAGTCTGCTCCT
GAAGAAATAGTTGGATCTGGCTATCAGCAAGTCATTTGCTCATAAAACTT
ATATTATTTCACTCAAGAATGATAGCAGAATGGTTGGCTTTATGTACGAA
ATAAATTCGGAGATTAATGTCCATATAATCTACAATAGCAATGCATGGCT
GCTTGATGTTCAAAATAAATTCTGAGATCTATGTCCATGTAAACAGTCAT
TGTGACTAGGACACCAACGATGTTATATATATTTTGTCAATGCAAGGTAG
TTGTTATATGGAAGCTTTAGGCAAATATCAATGCATTGCTTAAAAAAAAA
AAAAAAAAAAAAAAAAAAAA
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