CK934000

Overview
NameCK934000
Unique NameCK934000
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length720
Libraries
Library NameType
Developing fruit peel at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK934000 vs. ExPASy Swiss-Prot
Match: CATL_DROME (Cathepsin L OS=Drosophila melanogaster GN=Cp1 PE=1 SV=2)

HSP 1 Score: 103.99 bits (258), Expect = 8.447e-22
Identity = 56/130 (43.08%), Postives = 73/130 (56.15%), Query Frame = 2
Query:    5 YTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEVV-DGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGV-EDGVPYWLIKNSWGENWGDHGYFKMEMGK-NMCGIATCASYPVV 385
            Y   D  C F+   VG       +I  G E ++  AV  V PVSVA +   + F+FY  GVY+  +C    +D  H V+ VG+G  E G  YWL+KNSWG  WGD G+ KM   K N CGIA+ +SYP+V
Sbjct:  244 YEAIDDSCHFNKGTVGATDRGFTDIPQGDEKKMAEAVATVGPVSVAIDASHESFQFYSEGVYNEPQCDAQNLD--HGVLVVGFGTDESGEDYWLVKNSWGTTWGDKGFIKMLRNKENQCGIASASSYPLV 371          
BLAST of CK934000 vs. ExPASy Swiss-Prot
Match: CATQ_RAT (Cathepsin Q OS=Rattus norvegicus GN=Ctsq PE=2 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 1.441e-21
Identity = 57/133 (42.86%), Postives = 76/133 (57.14%), Query Frame = 2
Query:    5 YTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEVVDG-FRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVE----DGVPYWLIKNSWGENWGDHGYFKMEMGK-NMCGIATCASYPVV 385
            Y  K+GVC+++ +N   ++   V +   +ED L  AV    P++    V+   FRFY+ GVY   KC +    VNHAV+ VGYG E    DG  YWLIKNSWG+ WG  GY K+   + N C IA+ A YP V
Sbjct:  215 YERKEGVCRYNPKNSSAKITGFV-VLPESEDVLMDAVATKGPIATGVHVISSSFRFYQKGVYHEPKCSSY---VNHAVLVVGYGFEGNETDGNNYWLIKNSWGKRWGLRGYMKIAKDRNNHCAIASLAQYPTV 343          
BLAST of CK934000 vs. ExPASy Swiss-Prot
Match: CATL2_HUMAN (Cathepsin L2 OS=Homo sapiens GN=CTSL2 PE=1 SV=2)

HSP 1 Score: 102.834 bits (255), Expect = 1.882e-21
Identity = 57/133 (42.86%), Postives = 71/133 (53.38%), Query Frame = 2
Query:    5 YTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEVV-DGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVE----DGVPYWLIKNSWGENWGDHGYFKMEMGK-NMCGIATCASYPVV 385
            Y   D +CK+  EN          +  G E  L  AV  V P+SVA +     F+FYKSG+Y    C +  +D  H V+ VGYG E    +   YWL+KNSWG  WG +GY K+   K N CGIAT ASYP V
Sbjct:  204 YVAVDEICKYRPENSVANDTGFTVVAPGKEKALMKAVATVGPISVAMDAGHSSFQFYKSGIYFEPDCSSKNLD--HGVLVVGYGFEGANSNNSKYWLVKNSWGPEWGSNGYVKIAKDKNNHCGIATAASYPNV 334          
BLAST of CK934000 vs. ExPASy Swiss-Prot
Match: CATK_RAT (Cathepsin K OS=Rattus norvegicus GN=Ctsk PE=2 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 2.458e-21
Identity = 53/127 (41.73%), Postives = 72/127 (56.69%), Query Frame = 2
Query:    5 YTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEV-VDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKMEMGK-NMCGIATCASYP 379
            Y G+D  C +++     +      I +G E  L+ AV  V PVSV+ +  +  F+FY  GVY    C     +VNHAV+ VGYG + G  YW+IKNSWGE+WG+ GY  +   K N CGI   AS+P
Sbjct:  203 YVGQDESCMYNATAKAAKCRGYREIPVGNEKALKRAVARVGPVSVSIDASLTSFQFYSRGVYYDENCDRD--NVNHAVLVVGYGTQKGNKYWIIKNSWGESWGNKGYVLLARNKNNACGITNLASFP 327          
BLAST of CK934000 vs. ExPASy Swiss-Prot
Match: ORYA_ORYSJ (Oryzain alpha chain OS=Oryza sativa subsp. japonica GN=Os04g0650000 PE=1 SV=2)

HSP 1 Score: 99.7525 bits (247), Expect = 1.593e-20
Identity = 56/132 (42.42%), Postives = 78/132 (59.09%), Query Frame = 2
Query:    5 YTGKDGVCKFSSENVGVQVLDSV-NITLGAEDELQHAVGLVRPVSVAFEVVD-GFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKME----MGKNMCGIATCASYPV 382
            Y GKD  C  + +N  V  +DS  ++T  +E  LQ AV   +PVSVA E     F+ Y SG+++  KCG     ++H V AVGYG E+G  YW+++NSWG++WG+ GY +ME         CGIA   SYP+
Sbjct:  218 YKGKDERCDVNRKNAKVVTIDSYEDVTPNSETSLQKAVAN-QPVSVAIEAGGRAFQLYSSGIFTG-KCGTA---LDHGVAAVGYGTENGKDYWIVRNSWGKSWGESGYVRMERNIKASSGKCGIAVEPSYPL 344          
BLAST of CK934000 vs. ExPASy Swiss-Prot
Match: CATK_MOUSE (Cathepsin K OS=Mus musculus GN=Ctsk PE=2 SV=2)

HSP 1 Score: 99.7525 bits (247), Expect = 1.593e-20
Identity = 51/127 (40.16%), Postives = 72/127 (56.69%), Query Frame = 2
Query:    5 YTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEV-VDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKMEMGK-NMCGIATCASYP 379
            Y G+D  C +++     +      I +G E  L+ AV  V P+SV+ +  +  F+FY  GVY    C     +VNHAV+ VGYG + G  +W+IKNSWGE+WG+ GY  +   K N CGI   AS+P
Sbjct:  203 YVGQDESCMYNATAKAAKCRGYREIPVGNEKALKRAVARVGPISVSIDASLASFQFYSRGVYYDENCDRD--NVNHAVLVVGYGTQKGSKHWIIKNSWGESWGNKGYALLARNKNNACGITNMASFP 327          
BLAST of CK934000 vs. ExPASy Swiss-Prot
Match: CYSP3_DICDI (Cysteine proteinase 3 OS=Dictyostelium discoideum GN=cprC PE=3 SV=2)

HSP 1 Score: 99.3673 bits (246), Expect = 2.081e-20
Identity = 51/121 (42.15%), Postives = 76/121 (62.81%), Query Frame = 2
Query:   26 CKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEVV-DGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKMEMGK-NMCGIATCASYPV 382
            CKF   +V  ++     I  G E++LQ+A+ L+ PVSVA +   + F+ Y +GVY    C +   D++H V+AVG G ++G  Y+++KNSWG +WG +GY  M   K N CGI+T ASYP+
Sbjct:  219 CKFQEGSVAAKITSYKEIEAGDENDLQNAL-LLNPVSVAIDASHNSFQLYTAGVYYEPACSSE--DLDHGVLAVGMGTDNGEDYYIVKNSWGPSWGLNGYIHMARNKDNNCGISTMASYPI 336          
BLAST of CK934000 vs. ExPASy Swiss-Prot
Match: CATK_CHICK (Cathepsin K OS=Gallus gallus GN=CTSK PE=2 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 2.081e-20
Identity = 52/127 (40.94%), Postives = 69/127 (54.33%), Query Frame = 2
Query:    5 YTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEV-VDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKMEMG-KNMCGIATCASYP 379
            Y G+D  C +S      +      I    E  L+ AV  + PVSV  +  +  F+FY  GVY  T C   P ++NHAV+AVGYG + G  +W+IKNSWG  WG+ GY  +    K  CGIA  AS+P
Sbjct:  208 YIGQDESCMYSPTGKAAKCRGYREIPEDNEKALKRAVARIGPVSVGIDASLPSFQFYSRGVYYDTGCN--PENINHAVLAVGYGAQKGTKHWIIKNSWGTEWGNKGYVLLARNMKQTCGIANLASFP 332          
BLAST of CK934000 vs. ExPASy Swiss-Prot
Match: CPP2_ENTHI (Cysteine proteinase 2 OS=Entamoeba histolytica GN=CPP2 PE=1 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 2.717e-20
Identity = 53/128 (41.41%), Postives = 71/128 (55.47%), Query Frame = 2
Query:    5 YTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQHAV--GLVRPVSVAFEVVDG-FRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKMEMGKNMCGIATCASYP 379
            YTG D  CK + ++   ++     +    E EL+ A+  GLV    V+ +     F+ YKSG Y+ TKC N    +NH V AVGYGV DG   W+++NSWG  WGD GY  M +  N CG+AT   YP
Sbjct:  186 YTGSDSTCKTNVKSFA-KITGYTKVPRNNEAELKAALSQGLV---DVSIDASSAKFQLYKSGAYTDTKCKNNYFALNHEVCAVGYGVVDGKECWIVRNSWGTGWGDKGYINMVIEGNTCGVATDPLYP 309          
BLAST of CK934000 vs. ExPASy Swiss-Prot
Match: CATS_CANFA (Cathepsin S OS=Canis familiaris GN=CTSS PE=2 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 2.717e-20
Identity = 53/129 (41.09%), Postives = 70/129 (54.26%), Query Frame = 2
Query:    5 YTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEVVD-GFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKMEMGK-NMCGIATCASYPVV 385
            Y   +G C++ S+           +  G+ED L+ AV    PVSVA +     F  Y+SGVY    C     +VNH V+ VGYG  +G  YWL+KNSWG N+GD GY +M     N CGIA+  SYP +
Sbjct:  206 YKAMNGKCRYDSKKRAATCSKYTELPFGSEDALKEAVANKGPVSVAIDASHYSFFLYRSGVYYEPSC---TQNVNHGVLVVGYGNLNGKDYWLVKNSWGLNFGDQGYIRMARNSGNHCGIASYPSYPEI 331          
The following BLAST results are available for this feature:
BLAST of CK934000 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 166
Match NameE-valueIdentityDescription
CATL_DROME8.447e-2243.08Cathepsin L OS=Drosophila melanogaster GN=Cp1 PE=1... [more]
CATQ_RAT1.441e-2142.86Cathepsin Q OS=Rattus norvegicus GN=Ctsq PE=2 SV=1[more]
CATL2_HUMAN1.882e-2142.86Cathepsin L2 OS=Homo sapiens GN=CTSL2 PE=1 SV=2[more]
CATK_RAT2.458e-2141.73Cathepsin K OS=Rattus norvegicus GN=Ctsk PE=2 SV=1[more]
ORYA_ORYSJ1.593e-2042.42Oryzain alpha chain OS=Oryza sativa subsp. japonic... [more]
CATK_MOUSE1.593e-2040.16Cathepsin K OS=Mus musculus GN=Ctsk PE=2 SV=2[more]
CYSP3_DICDI2.081e-2042.15Cysteine proteinase 3 OS=Dictyostelium discoideum ... [more]
CATK_CHICK2.081e-2040.94Cathepsin K OS=Gallus gallus GN=CTSK PE=2 SV=1[more]
CPP2_ENTHI2.717e-2041.41Cysteine proteinase 2 OS=Entamoeba histolytica GN=... [more]
CATS_CANFA2.717e-2041.09Cathepsin S OS=Canis familiaris GN=CTSS PE=2 SV=1[more]

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Properties
Property NameValue
Genbank descriptionCGF1004542_F04 Developing fruit peel at 38 DAFB Citrus sinensis cDNA clone P38DAB10001_IVF_F04 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK934000 ID=CK934000; Name=CK934000; organism=Citrus sinensis; type=EST; length=720bp
GGGCTACACCGGAAAAGATGGTGTCTGCAAATTCTCATCTGAAAATGTTG
GCGTCCAAGTCCTGGACTCAGTCAACATTACCTTGGGTGCTGAAGATGAA
TTACAGCATGCAGTTGGTCTTGTTCGACCTGTGAGTGTGGCATTTGAAGT
AGTAGATGGATTCCGATTTTACAAGAGTGGAGTTTACAGCAGCACTAAAT
GTGGAAATACTCCCATGGATGTGAACCATGCCGTCGTTGCTGTTGGGTAC
GGAGTTGAAGATGGTGTTCCATATTGGCTGATTAAGAACTCTTGGGGAGA
GAACTGGGGCGATCATGGCTACTTTAAGATGGAGATGGGGAAGAACATGT
GTGGTATTGCAACTTGTGCATCATACCCAGTTGTGGCTTAGTCTGCTCCT
GAAGAAATAGTTGGATCTGGCTATCAGCAAGTCATTTGCTCATAAAACTT
ATATTATTTCACTCAAGAATGATAGCAGAATGGTTGGCTTTATGTACGAA
ATAAATTCGGAGATTAATGTCCATATAATCTACAATAGCAATGCATGGCT
GCTTGATGTTCAAAATAAATTCTGAGATCTATGTCCATGTAAACAGTCAT
TGTGACTAGGACACCAACGATGTTATATATATTTTGTCAATGCAAGGTAG
TTGTTATATGGAAGCTTTAGGCAAATATCAATGCATTGCTTAAAAAAAAA
AAAAAAAAAAAAAAAAAAAA
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