CK934012

Overview
NameCK934012
Unique NameCK934012
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length772
Libraries
Library NameType
Developing fruit peel at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig5392 contig Csv1_Contig5392:1..753. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CK934012 vs. ExPASy Swiss-Prot
Match: CATA_STRCO (Catalase OS=Streptomyces coelicolor GN=katA PE=3 SV=1)

HSP 1 Score: 226.098 bits (575), Expect = 1.674e-58
Identity = 108/210 (51.43%), Postives = 142/210 (67.62%), Query Frame = 3
Query:  141 MTTNAGAPVWNDNHSLTVGSRGPVLLEDYHLVEKLAHFARERIPERVVHARGASAKGFFECTHDISHLTCADLFRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNWDLLGNSIPVFFIRDATKFPDVIHAFKPNPKSHIQEYWRILDFCSHLPESLSTFSWFFDDVGIPQDYRHMEGFGVQTFTLVNKNGKVHYVKFHW 770
            +TT +GAPV ++ +S + G  GP+L++D HL+EKLA F RERIPERVVHARG+ A G FE T D+S  T AD     G +T V +RFSTV    G  + +RDPRGFA+KFYT EGN+DL+GN+ PVFFI+D  KFPD IH+ K +P +  QE   + DF +H PE+    +W   D GIP  YRHM+GFG  T+   N  G+  +VK+H+
Sbjct:    6 LTTESGAPVADNQNSASAGIGGPLLIQDQHLIEKLARFNRERIPERVVHARGSGAYGHFEVTDDVSGFTHADFLNTVGKRTEVFLRFSTVADSLGGADAVRDPRGFALKFYTEEGNYDLVGNNTPVFFIKDPIKFPDFIHSQKRDPFTGRQEPDNVFDFWAHSPEATHQITWLMGDRGIPASYRHMDGFGSHTYQWTNARGESFFVKYHF 215          
BLAST of CK934012 vs. ExPASy Swiss-Prot
Match: CATE_PSEAE (Catalase HPII OS=Pseudomonas aeruginosa GN=katE PE=3 SV=1)

HSP 1 Score: 224.942 bits (572), Expect = 3.730e-58
Identity = 115/217 (53.00%), Postives = 143/217 (65.90%), Query Frame = 3
Query:  141 MTTNAGAPVWNDNHSLTVGSRGPVLLEDYHLVEKLAHFARERIPERVVHARGASAKGFFECTHDISHLTCADLFRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNWDLLGNSIPVFFIRDATKFPDVIHAFKPNPKSHI-------QEYWRILDFCSHLPESLSTFSWFFDDVGIPQDYRHMEGFGVQTFTLVNKNGKVHYVKFHW 770
            ++TN G  + ++ ++L  G RGP LLED+ + EK+ HF  ERIPERVVHARG++A G+FE   D+S LT A      G +TPV VRFSTV   RGS +T+RD RGFAVKFYT EGN+DL+GN++PVFFI+DA KFPD +HA KP P + I         +W   DF S  PES     W   D  IP  YR+M+GFGV TF LVN  G+   VKFHW
Sbjct:   42 LSTNTGTRIADNQNTLKAGERGPSLLEDFIMREKITHFDHERIPERVVHARGSAAHGYFEAYEDLSDLTKAGFLAEAGKRTPVFVRFSTVQGPRGSADTVRDVRGFAVKFYTDEGNFDLVGNNMPVFFIQDAIKFPDFVHAVKPEPHNEIPTGASAHDTFW---DFVSLTPESAHMVMWLMSDRAIPIAYRNMQGFGVHTFRLVNAAGESVLVKFHW 255          
BLAST of CK934012 vs. ExPASy Swiss-Prot
Match: CATA_BRUSU (Catalase OS=Brucella suis GN=katA PE=3 SV=3)

HSP 1 Score: 224.942 bits (572), Expect = 3.730e-58
Identity = 109/212 (51.42%), Postives = 147/212 (69.34%), Query Frame = 3
Query:  135 PFMTTNAGAPVWNDNHSLTVGSRGPVLLEDYHLVEKLAHFARERIPERVVHARGASAKGFFECTHDISHLTCADLFRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNWDLLGNSIPVFFIRDATKFPDVIHAFKPNPKSHIQEYWRILDFCSHLPESLSTFSWFFDDVGIPQDYRHMEGFGVQTFTLVNKNGKVHYVKFHW 770
            P MTT+AGAP+ ++ +SLT G RGP+L++DY L+EKL+H  RERIPER VHA+G  A G    T DIS  T A + + PG QTP++ RFSTV  E G+ +  RD RGFA+KFYT+EGNWDL+GN+ PVFF+RD  KFPD IH  K +P++H++    + DF S  PESL   +    D G+P D RH+ G+G  T++  N  G+ ++VKFH+
Sbjct:    5 PIMTTSAGAPIPDNQNSLTAGERGPILMQDYQLIEKLSHQNRERIPERAVHAKGWGAYGTLTITGDISRYTKAKVLQ-PGAQTPMLARFSTVAGELGAADAERDVRGFALKFYTQEGNWDLVGNNTPVFFVRDPLKFPDFIHTQKRHPRTHLRSATAMWDFWSLSPESLHQVTILMSDRGLPTDVRHINGYGSHTYSFWNDAGERYWVKFHF 215          
BLAST of CK934012 vs. ExPASy Swiss-Prot
Match: CATA_BRUME (Catalase OS=Brucella melitensis GN=katA PE=3 SV=2)

HSP 1 Score: 224.942 bits (572), Expect = 3.730e-58
Identity = 109/212 (51.42%), Postives = 147/212 (69.34%), Query Frame = 3
Query:  135 PFMTTNAGAPVWNDNHSLTVGSRGPVLLEDYHLVEKLAHFARERIPERVVHARGASAKGFFECTHDISHLTCADLFRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNWDLLGNSIPVFFIRDATKFPDVIHAFKPNPKSHIQEYWRILDFCSHLPESLSTFSWFFDDVGIPQDYRHMEGFGVQTFTLVNKNGKVHYVKFHW 770
            P MTT+AGAP+ ++ +SLT G RGP+L++DY L+EKL+H  RERIPER VHA+G  A G    T DIS  T A + + PG QTP++ RFSTV  E G+ +  RD RGFA+KFYT+EGNWDL+GN+ PVFF+RD  KFPD IH  K +P++H++    + DF S  PESL   +    D G+P D RH+ G+G  T++  N  G+ ++VKFH+
Sbjct:    5 PIMTTSAGAPIPDNQNSLTAGERGPILMQDYQLIEKLSHQNRERIPERAVHAKGWGAYGTLTITGDISRYTKAKVLQ-PGAQTPMLARFSTVAGELGAADAERDVRGFALKFYTQEGNWDLVGNNTPVFFVRDPLKFPDFIHTQKRHPRTHLRSATAMWDFWSLSPESLHQVTILMSDRGLPTDVRHINGYGSHTYSFWNDAGERYWVKFHF 215          
BLAST of CK934012 vs. ExPASy Swiss-Prot
Match: CATA_BRUAB (Catalase OS=Brucella abortus GN=katA PE=1 SV=2)

HSP 1 Score: 224.942 bits (572), Expect = 3.730e-58
Identity = 109/212 (51.42%), Postives = 147/212 (69.34%), Query Frame = 3
Query:  135 PFMTTNAGAPVWNDNHSLTVGSRGPVLLEDYHLVEKLAHFARERIPERVVHARGASAKGFFECTHDISHLTCADLFRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNWDLLGNSIPVFFIRDATKFPDVIHAFKPNPKSHIQEYWRILDFCSHLPESLSTFSWFFDDVGIPQDYRHMEGFGVQTFTLVNKNGKVHYVKFHW 770
            P MTT+AGAP+ ++ +SLT G RGP+L++DY L+EKL+H  RERIPER VHA+G  A G    T DIS  T A + + PG QTP++ RFSTV  E G+ +  RD RGFA+KFYT+EGNWDL+GN+ PVFF+RD  KFPD IH  K +P++H++    + DF S  PESL   +    D G+P D RH+ G+G  T++  N  G+ ++VKFH+
Sbjct:    5 PIMTTSAGAPIPDNQNSLTAGERGPILMQDYQLIEKLSHQNRERIPERAVHAKGWGAYGTLTITGDISRYTKAKVLQ-PGAQTPMLARFSTVAGELGAADAERDVRGFALKFYTQEGNWDLVGNNTPVFFVRDPLKFPDFIHTQKRHPRTHLRSATAMWDFWSLSPESLHQVTILMSDRGLPTDVRHINGYGSHTYSFWNDAGERYWVKFHF 215          
BLAST of CK934012 vs. ExPASy Swiss-Prot
Match: CATE_ECOLI (Catalase HPII OS=Escherichia coli (strain K12) GN=katE PE=1 SV=1)

HSP 1 Score: 223.787 bits (569), Expect = 8.309e-58
Identity = 112/217 (51.61%), Postives = 142/217 (65.44%), Query Frame = 3
Query:  141 MTTNAGAPVWNDNHSLTVGSRGPVLLEDYHLVEKLAHFARERIPERVVHARGASAKGFFECTHDISHLTCADLFRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNWDLLGNSIPVFFIRDATKFPDVIHAFKPNP-------KSHIQEYWRILDFCSHLPESLSTFSWFFDDVGIPQDYRHMEGFGVQTFTLVNKNGKVHYVKFHW 770
            +TTN G  + +D +SL  GSRGP LLED+ L EK+ HF  ERIPER+VHARG++A G+F+    +S +T AD    P   TPV VRFSTV    GS +T+RD RGFA KFYT EG +DL+GN+ P+FFI+DA KFPD +HA KP P       +S    +W   D+ S  PE+L    W   D GIP+ YR MEGFG+ TF L+N  GK  +V+FHW
Sbjct:   80 LTTNQGVRIADDQNSLRAGSRGPTLLEDFILREKITHFDHERIPERIVHARGSAAHGYFQPYKSLSDITKADFLSDPNKITPVFVRFSTVQGGAGSADTVRDIRGFATKFYTEEGIFDLVGNNTPIFFIQDAHKFPDFVHAVKPEPHWAIPQGQSAHDTFW---DYVSLQPETLHNVMWAMSDRGIPRSYRTMEGFGIHTFRLINAEGKATFVRFHW 293          
BLAST of CK934012 vs. ExPASy Swiss-Prot
Match: CATA_DICDI (Catalase-A OS=Dictyostelium discoideum GN=catA PE=2 SV=2)

HSP 1 Score: 222.631 bits (566), Expect = 1.851e-57
Identity = 108/215 (50.23%), Postives = 146/215 (67.91%), Query Frame = 3
Query:  129 NAPFMTTNAGAPVWNDNHSLTVGSRGPVLLEDYHLVEKLAHFARERIPERVVHARGASAKGFFEC-THDISHLTCADLFRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNWDLLGNSIPVFFIRDATKFPDVIHAFKPNPKSHIQEYWRILDFCSHLPESLSTFSWFFDDVGIPQDYRHMEGFGVQTFTLVNKNGKVHYVKFHW 770
            +AP +TT++G+P+ N+ +S+T G  GP+L++D+ L++KLAHF RERIPERVVHA+GA A G+FE  + D+     A      G +TP+  RFSTV  E+GS ++ RDPRGFAVKFYT EGN+D++GN+ PVFFIRD +KFPD IH  K NP+++ ++     DF    PES    S  F D G P+ YRHM GF   T   VN  GK ++VK H+
Sbjct:    2 SAPVLTTSSGSPIDNNLNSMTAGVNGPILIQDFTLIDKLAHFDRERIPERVVHAKGAGAHGYFEVPSSDVPKWCKAKFLNKVGKRTPIFTRFSTVGGEKGSSDSERDPRGFAVKFYTEEGNFDMVGNNTPVFFIRDPSKFPDFIHTQKRNPQTNCKDPNMFWDFLGQTPESTHQVSILFSDRGTPKSYRHMHGFSSHTLKFVNAQGKPYWVKLHF 216          
BLAST of CK934012 vs. ExPASy Swiss-Prot
Match: CATA_ERYGR (Catalase OS=Erysiphe graminis subsp. hordei GN=CAT1 PE=3 SV=1)

HSP 1 Score: 219.935 bits (559), Expect = 1.200e-56
Identity = 112/230 (48.70%), Postives = 148/230 (64.35%), Query Frame = 3
Query:   93 MDPYKLLPSTTHNAPFMTTNAGAPVWNDNHSLTVGSRGPVLLEDYHLVEKLAHFARERIPERVVHARGASAKGFFECTHDISHLTCADLFRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNWDLLGNSIPVFFIRDATKFPDVIHAFKPNPKSHIQE----YWRILDFCSHLPESLSTFSWFFDDVGIPQDYRHMEGFGVQTFTLVNKNGKVHYVKFHW 770
            +D +K+  S +    ++TT+AG P+  D+ SL  G RGP LLED+   +K+ HF  ER+PER VHARGA A G F    D +++T A    + G +TPV VRFSTV   RGS +T+RD  GFA +FYT EGN+D++GN+IPVFFI+DA  FPD++HA KP+P S I +    +    DF S  P +L T  W     GIP+ YRHM+GFGV T  LV  +GK   VK+HW
Sbjct:   44 LDQFKVEDSNS----YLTTDAGGPI-QDDASLKAGERGPTLLEDFIFRQKIQHFDHERVPERAVHARGAGAYGTFTSYADWTNITAASFLNSKGKETPVFVRFSTVAGSRGSADTVRDVHGFATRFYTDEGNFDIVGNNIPVFFIQDAILFPDLVHAVKPSPDSEIPQAATGHDSAWDFFSQQPSTLHTLFWAMSGHGIPRSYRHMDGFGVHTMRLVTDDGKSKLVKWHW 268          
BLAST of CK934012 vs. ExPASy Swiss-Prot
Match: CATA_DESVM (Catalase OS=Desulfovibrio vulgaris (strain Miyazaki F / DSM 19637) GN=katA PE=3 SV=2)

HSP 1 Score: 219.935 bits (559), Expect = 1.200e-56
Identity = 107/209 (51.20%), Postives = 146/209 (69.86%), Query Frame = 3
Query:  141 MTTNAGAPVWNDNHSLTVGSRGPVLLEDYHLVEKLAHFARERIPERVVHARGASAKGFFECTHDISHLTCADLFRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNWDLLGNSIPVFFIRDATKFPDVIHAFKPNPKSHIQEYWRILDFCSHLPESLSTFSWFFDDVGIPQDYRHMEGFGVQTFTLVNKNGKVHYVKFH 767
            +TTNAGAPV ++ +++T G RGP+LL+D   +EKLAHF RE IPER +HA+G+ A G F  THDI+  T A LF   G +T + VRFSTV  ERG+ +  RD RGFA+KFYT +GNWDL+GN+ PVFF+RD  KFPD+ HA K +P+++++      DF + LPE+L   +    D GIP  YRHM GFG  TF+ ++ + + ++VKFH
Sbjct:    6 LTTNAGAPVPDNQNAMTAGPRGPMLLQDVWFLEKLAHFDREVIPERRMHAKGSGAYGTFTVTHDITSYTKAALFSKIGKKTDLFVRFSTVAGERGAADAERDIRGFAIKFYTEQGNWDLVGNNTPVFFLRDPLKFPDLNHAVKRDPRTNMRSAKNNWDFWTSLPEALHQVTVVMSDRGIPASYRHMHGFGSHTFSFISPDNQRYWVKFH 214          
BLAST of CK934012 vs. ExPASy Swiss-Prot
Match: CATA_METBF (Catalase OS=Methanosarcina barkeri (strain Fusaro / DSM 804) GN=kat PE=3 SV=1)

HSP 1 Score: 219.55 bits (558), Expect = 1.567e-56
Identity = 107/215 (49.77%), Postives = 146/215 (67.91%), Query Frame = 3
Query:  126 HNAPFMTTNAGAPVWNDNHSLTVGSRGPVLLEDYHLVEKLAHFARERIPERVVHARGASAKGFFECTHDISHLTCADLFRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNWDLLGNSIPVFFIRDATKFPDVIHAFKPNPKSHIQEYWRILDFCSHLPESLSTFSWFFDDVGIPQDYRHMEGFGVQTFTLVNKNGKVHYVKFHW 770
            +++  +TT  G PV +D +SLT G+RGPVL++D HL++KL+HF  ERIPERVVHA+GA A G+FE T D++  T A      G +T V VRFSTV  E+GS ++ RDPRGFAVKFYT +GN+DL+GN+ PVFFIRD  KFPD IH  K NP ++ ++     DF S  PES+   +  F D G P  YR+M G+   T+   N+ G+  +V++H+
Sbjct:    5 NSSKVLTTGFGIPVGDDQNSLTAGNRGPVLMQDVHLLDKLSHFDHERIPERVVHAKGAGAGGYFEVTADVTKYTKAKFLSEIGKRTEVFVRFSTVGGEKGSADSARDPRGFAVKFYTEDGNYDLVGNNTPVFFIRDPLKFPDFIHTQKRNPATNCKDPDMFWDFLSLTPESIHQVTILFSDRGTPATYRNMNGYSSHTYKWYNEKGEYFWVQYHF 219          
The following BLAST results are available for this feature:
BLAST of CK934012 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 142
Match NameE-valueIdentityDescription
CATA_STRCO1.674e-5851.43Catalase OS=Streptomyces coelicolor GN=katA PE=3 S... [more]
CATE_PSEAE3.730e-5853.00Catalase HPII OS=Pseudomonas aeruginosa GN=katE PE... [more]
CATA_BRUSU3.730e-5851.42Catalase OS=Brucella suis GN=katA PE=3 SV=3[more]
CATA_BRUME3.730e-5851.42Catalase OS=Brucella melitensis GN=katA PE=3 SV=2[more]
CATA_BRUAB3.730e-5851.42Catalase OS=Brucella abortus GN=katA PE=1 SV=2[more]
CATE_ECOLI8.309e-5851.61Catalase HPII OS=Escherichia coli (strain K12) GN=... [more]
CATA_DICDI1.851e-5750.23Catalase-A OS=Dictyostelium discoideum GN=catA PE=... [more]
CATA_ERYGR1.200e-5648.70Catalase OS=Erysiphe graminis subsp. hordei GN=CAT... [more]
CATA_DESVM1.200e-5651.20Catalase OS=Desulfovibrio vulgaris (strain Miyazak... [more]
CATA_METBF1.567e-5649.77Catalase OS=Methanosarcina barkeri (strain Fusaro ... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004542_E10 Developing fruit peel at 38 DAFB Citrus sinensis cDNA clone P38DAB10001_IVF_E10 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK934012 ID=CK934012; Name=CK934012; organism=Citrus sinensis; type=EST; length=772bp
GGGGACACTCTTCTTGAGTCTCGACTCAACTCCACTTCTCCTTTCTTACG
ATAATAATAACAGTAGCAAAATCTTCAGCAAGAAATATCGCCATGGATCC
CTACAAATTGCTTCCGTCAACTACTCACAATGCCCCCTTTATGACTACAA
ATGCCGGCGCTCCTGTCTGGAACGACAATCACTCCTTGACTGTTGGAAGT
AGAGGTCCTGTCCTTCTTGAGGATTATCATCTGGTGGAGAAACTAGCTCA
TTTTGCCAGGGAGAGGATTCCAGAACGTGTCGTCCATGCTAGGGGAGCCA
GTGCTAAGGGTTTCTTTGAGTGCACCCATGATATTTCTCACCTTACTTGT
GCTGATCTTTTTCGAGCTCCAGGGGTTCAGACACCTGTCATTGTTCGCTT
CTCCACTGTTATCCATGAGCGGGGCAGCCCTGAGACACTCAGGGATCCTC
GAGGATTTGCAGTCAAGTTTTACACCAGAGAGGGTAATTGGGATCTTCTG
GGTAACAGTATCCCTGTTTTTTTCATCCGTGATGCAACCAAATTCCCAGA
TGTGATCCATGCTTTTAAACCTAATCCAAAGTCTCACATCCAAGAGTACT
GGAGGATCCTCGACTTCTGCTCCCACCTTCCTGAAAGCTTGTCCACATTT
TCCTGGTTCTTTGATGATGTGGGTATTCCACAAGATTACAGGCACATGGA
AGGCTTCGGTGTTCAAACTTTTACACTGGTCAATAAGAATGGGAAAGTGC
ACTATGTGAAATTCCACTGGAA
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