CK934014

Overview
NameCK934014
Unique NameCK934014
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length640
Libraries
Library NameType
Developing fruit peel at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK934014 vs. ExPASy Swiss-Prot
Match: HSP14_SOYBN (17.5 kDa class I heat shock protein OS=Glycine max GN=HSP17.5-E PE=3 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 5.826e-21
Identity = 53/110 (48.18%), Postives = 70/110 (63.64%), Query Frame = 1
Query:  169 KSSNAPTRTYVRDAKAMGATPADVKEYPNSYVFIVDMPGLKSGDIKVQVEDDNVLLISGERKREEEKDGAKYVRMERRVGKFMRKFVLPENANVEAISAVCQDGVLTVTV 498
            K  + PT +   +  A  +T  D KE P ++VF  D+PGLK  ++KVQ+EDD VL ISGER  E+E     + R+ER  GKF R+F LPENA V  + A  ++GVLTVTV
Sbjct:   28 KDFHVPTSSVSAENSAFVSTRVDWKETPEAHVFKADIPGLKKEEVKVQIEDDRVLQISGERNVEKEDKNDTWHRVERSSGKFTRRFRLPENAKVNEVKASMENGVLTVTV 137          
BLAST of CK934014 vs. ExPASy Swiss-Prot
Match: HS177_ORYSJ (17.7 kDa class I heat shock protein OS=Oryza sativa subsp. japonica GN=HSP17.7 PE=2 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 5.826e-21
Identity = 55/118 (46.61%), Postives = 73/118 (61.86%), Query Frame = 1
Query:  145 GADDSADNKSSNAPTRTYVRDAKAMGATPADVKEYPNSYVFIVDMPGLKSGDIKVQVEDDNVLLISGERKREEEKDGAKYVRMERRVGKFMRKFVLPENANVEAISAVCQDGVLTVTV 498
            G+  S+ +  S  P      DA A      D KE P  +VF  D+PGLK  ++KV+V+D N+L ISGER RE+E+   K+ R+ER  GKF+R+F LPEN   E I A  ++GVLTVTV
Sbjct:   27 GSGGSSSSSGSLFPRAN--SDAAAFAGARIDWKETPEVHVFKADVPGLKKEEVKVEVDDGNILQISGERSREQEEKSDKWHRVERSSGKFLRRFRLPENTKPEQIKASMENGVLTVTV 142          
BLAST of CK934014 vs. ExPASy Swiss-Prot
Match: HS16A_WHEAT (16.9 kDa class I heat shock protein 1 OS=Triticum aestivum GN=hsp16.9A PE=2 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 5.826e-21
Identity = 50/98 (51.02%), Postives = 69/98 (70.41%), Query Frame = 1
Query:  205 DAKAMGATPADVKEYPNSYVFIVDMPGLKSGDIKVQVEDDNVLLISGERKREEEKDGAKYVRMERRVGKFMRKFVLPENANVEAISAVCQDGVLTVTV 498
            +  A      D KE P ++VF VD+PG+K  ++KV+VED NVL++SGER RE+E    K+ R+ER  GKF+R+F LPE+A VE + A  ++GVLTVTV
Sbjct:   37 ETAAFANARVDWKETPEAHVFKVDLPGVKKEEVKVEVEDGNVLVVSGERSREKEDKNDKWHRVERSSGKFVRRFRLPEDAKVEEVKAGLENGVLTVTV 134          
BLAST of CK934014 vs. ExPASy Swiss-Prot
Match: HS174_ORYSJ (17.4 kDa class I heat shock protein OS=Oryza sativa subsp. japonica GN=HSP17.4 PE=2 SV=2)

HSP 1 Score: 100.138 bits (248), Expect = 9.938e-21
Identity = 52/98 (53.06%), Postives = 67/98 (68.37%), Query Frame = 1
Query:  205 DAKAMGATPADVKEYPNSYVFIVDMPGLKSGDIKVQVEDDNVLLISGERKREEEKDGAKYVRMERRVGKFMRKFVLPENANVEAISAVCQDGVLTVTV 498
            DA A      D KE P ++VF  D+PGLK  ++KV+VED NVL ISGER +E+E+   K+ R+ER  GKF+R+F LPEN   E I A  ++GVLTVTV
Sbjct:   40 DAAAFAGARIDWKETPEAHVFKADVPGLKKEEVKVEVEDGNVLQISGERIKEQEEKTDKWHRVERSSGKFLRRFRLPENTKPEQIKASMENGVLTVTV 137          
BLAST of CK934014 vs. ExPASy Swiss-Prot
Match: HSP12_DAUCA (18.0 kDa class I heat shock protein OS=Daucus carota PE=3 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 1.298e-20
Identity = 50/109 (45.87%), Postives = 74/109 (67.89%), Query Frame = 1
Query:  172 SSNAPTRTYVRDAKAMGATPADVKEYPNSYVFIVDMPGLKSGDIKVQVEDDNVLLISGERKREEEKDGAKYVRMERRVGKFMRKFVLPENANVEAISAVCQDGVLTVTV 498
            +S+  +  + ++  A   T  D KE P ++VF  D+PGLK  ++KV+VE+  VL ISGER +E+E+   K+ R+E   GKF+R+F LPENANV+ + A  ++GVLTVTV
Sbjct:   34 TSSGTSSEFGKETAAFANTHIDWKETPQAHVFKADLPGLKKEEVKVEVEEGKVLQISGERNKEKEEKNNKWHRVEFSSGKFLRRFRLPENANVDEVKAGMENGVLTVTV 142          
BLAST of CK934014 vs. ExPASy Swiss-Prot
Match: HSP11_MEDSA (18.1 kDa class I heat shock protein (Fragment) OS=Medicago sativa GN=HSP18.1 PE=2 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 1.298e-20
Identity = 49/102 (48.04%), Postives = 71/102 (69.61%), Query Frame = 1
Query:  193 TYVRDAKAMGATPADVKEYPNSYVFIVDMPGLKSGDIKVQVEDDNVLLISGERKREEEKDGAKYVRMERRVGKFMRKFVLPENANVEAISAVCQDGVLTVTV 498
            ++ ++  A  +T  D KE P ++VF  D+PGLK  ++KV++EDD VL ISGER  E+E    ++ R+ER  GKFMR+F LPENA ++ + A  ++GVLTVTV
Sbjct:   25 SFPQENSAFVSTRIDWKETPEAHVFKADLPGLKKEEVKVEIEDDRVLQISGERNVEKEDKNDQWHRVERSSGKFMRRFRLPENAKMDQVKAAMENGVLTVTV 126          
BLAST of CK934014 vs. ExPASy Swiss-Prot
Match: HS16B_ORYSJ (16.9 kDa class I heat shock protein 2 OS=Oryza sativa subsp. japonica GN=HSP16.9B PE=2 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 1.298e-20
Identity = 52/115 (45.22%), Postives = 73/115 (63.48%), Query Frame = 1
Query:  154 DSADNKSSNAPTRTYVRDAKAMGATPADVKEYPNSYVFIVDMPGLKSGDIKVQVEDDNVLLISGERKREEEKDGAKYVRMERRVGKFMRKFVLPENANVEAISAVCQDGVLTVTV 498
            D  D+   +    T   D  A      D KE P S+VF  D+PG+K  ++KV+VE+ NVL+ISG+R +E+E    K+ R+ER  G+FMR+F LPENA V+ + A  ++GVLTVTV
Sbjct:   19 DPFDSVFRSVVPATSDNDTAAFANARIDWKETPESHVFKADLPGVKKEEVKVEVEEGNVLVISGQRSKEKEDKNDKWHRVERSSGQFMRRFRLPENAKVDQVKAGMENGVLTVTV 133          
BLAST of CK934014 vs. ExPASy Swiss-Prot
Match: HS16A_ORYSJ (16.9 kDa class I heat shock protein 1 OS=Oryza sativa subsp. japonica GN=HSP16.9A PE=1 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 1.298e-20
Identity = 52/115 (45.22%), Postives = 73/115 (63.48%), Query Frame = 1
Query:  154 DSADNKSSNAPTRTYVRDAKAMGATPADVKEYPNSYVFIVDMPGLKSGDIKVQVEDDNVLLISGERKREEEKDGAKYVRMERRVGKFMRKFVLPENANVEAISAVCQDGVLTVTV 498
            D  D+   +    T   D  A      D KE P S+VF  D+PG+K  ++KV+VE+ NVL+ISG+R +E+E    K+ R+ER  G+FMR+F LPENA V+ + A  ++GVLTVTV
Sbjct:   19 DPFDSVFRSVVPATSDNDTAAFANARIDWKETPESHVFKADLPGVKKEEVKVEVEEGNVLVISGQRSKEKEDKNDKWHRVERSSGQFMRRFRLPENAKVDQVKAGLENGVLTVTV 133          
BLAST of CK934014 vs. ExPASy Swiss-Prot
Match: HSP11_SOLPE (17.7 kDa class I heat shock protein OS=Solanum peruvianum PE=2 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 1.695e-20
Identity = 50/98 (51.02%), Postives = 67/98 (68.37%), Query Frame = 1
Query:  205 DAKAMGATPADVKEYPNSYVFIVDMPGLKSGDIKVQVEDDNVLLISGERKREEEKDGAKYVRMERRVGKFMRKFVLPENANVEAISAVCQDGVLTVTV 498
            +  A   T  D KE P ++VF  D+PGLK  ++KV+VE+D VL ISGER  E+E    K+ R+ER  GKFMR+F LPENA ++ + A  ++GVLTVTV
Sbjct:   40 ETSAFANTRIDWKETPEAHVFKADLPGLKLEEVKVEVEEDRVLQISGERNMEKEDKNDKWQRVERSSGKFMRRFRLPENAKMDQVKASMENGVLTVTV 137          
BLAST of CK934014 vs. ExPASy Swiss-Prot
Match: HSP17_ARATH (17.4 kDa class I heat shock protein OS=Arabidopsis thaliana GN=HSP17.4A PE=1 SV=2)

HSP 1 Score: 98.9821 bits (245), Expect = 2.214e-20
Identity = 52/108 (48.15%), Postives = 70/108 (64.81%), Query Frame = 1
Query:  175 SNAPTRTYVRDAKAMGATPADVKEYPNSYVFIVDMPGLKSGDIKVQVEDDNVLLISGERKREEEKDGAKYVRMERRVGKFMRKFVLPENANVEAISAVCQDGVLTVTV 498
            +NAP +    D  A      D +E P ++VF  D+PGLK  ++KV+VED N+L ISGER  E E+    + R+ER  GKFMR+F LPENA VE + A  ++GVL+VTV
Sbjct:   36 TNAPAK----DVAAFTNAKVDWRETPEAHVFKADVPGLKKEEVKVEVEDGNILQISGERSSENEEKSDTWHRVERSSGKFMRRFRLPENAKVEEVKASMENGVLSVTV 139          
The following BLAST results are available for this feature:
BLAST of CK934014 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 56
Match NameE-valueIdentityDescription
HSP14_SOYBN5.826e-2148.1817.5 kDa class I heat shock protein OS=Glycine max... [more]
HS177_ORYSJ5.826e-2146.6117.7 kDa class I heat shock protein OS=Oryza sativ... [more]
HS16A_WHEAT5.826e-2151.0216.9 kDa class I heat shock protein 1 OS=Triticum ... [more]
HS174_ORYSJ9.938e-2153.0617.4 kDa class I heat shock protein OS=Oryza sativ... [more]
HSP12_DAUCA1.298e-2045.8718.0 kDa class I heat shock protein OS=Daucus caro... [more]
HSP11_MEDSA1.298e-2048.0418.1 kDa class I heat shock protein (Fragment) OS=... [more]
HS16B_ORYSJ1.298e-2045.2216.9 kDa class I heat shock protein 2 OS=Oryza sat... [more]
HS16A_ORYSJ1.298e-2045.2216.9 kDa class I heat shock protein 1 OS=Oryza sat... [more]
HSP11_SOLPE1.695e-2051.0217.7 kDa class I heat shock protein OS=Solanum per... [more]
HSP17_ARATH2.214e-2048.1517.4 kDa class I heat shock protein OS=Arabidopsis... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004542_C12 Developing fruit peel at 38 DAFB Citrus sinensis cDNA clone P38DAB10001_IVF_C12 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK934014 ID=CK934014; Name=CK934014; organism=Citrus sinensis; type=EST; length=640bp
GGGGAACCAACAAAAGACGAACGAATCCTCATTTGGCAGTAGCAAACATC
AACAACAGCTAATACTCGCAAAAGAATGGATTTCAGAATCATGGGTTTGG
ACTCGTCGCCACTCTTTTCAACTCTGCAGCACATGATGGAGATGGGGGCG
GACGACTCCGCTGACAACAAGTCATCCAACGCGCCGACGCGCACGTACGT
GAGAGACGCCAAGGCAATGGGGGCGACGCCTGCGGACGTGAAGGAGTATC
CGAACTCGTACGTGTTCATCGTCGATATGCCCGGACTGAAGTCGGGGGAC
ATCAAGGTCCAAGTGGAGGACGACAATGTGCTGCTCATAAGCGGTGAGAG
GAAGCGGGAGGAGGAGAAAGATGGGGCCAAGTATGTGAGAATGGAGAGGA
GGGTTGGCAAGTTTATGAGGAAATTTGTGCTGCCTGAGAATGCTAACGTT
GAAGCCATTTCGGCGGTGTGTCAGGACGGAGTGTTGACTGTGACTGTCGA
TAAGCTGCCACCGCCGGAGCCCAAGAAGCCCAAGACCATTGAGGTTAAGA
TTGCTTGAACTTTGAGAGAGAGAATATGCTGGATTGTGGGTGCTGATGTC
TTTTCTATTTGCCGGTTGTTATGAATAATTTTGCTTGTGG
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