CK934017

Overview
NameCK934017
Unique NameCK934017
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length876
Libraries
Library NameType
Developing fruit peel at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig13796 contig Csv1_Contig13796:8..883. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CK934017 vs. ExPASy Swiss-Prot
Match: PER1_WHEAT (Peroxidase OS=Triticum aestivum PE=2 SV=1)

HSP 1 Score: 119.398 bits (298), Expect = 2.697e-26
Identity = 84/246 (34.15%), Postives = 112/246 (45.53%), Query Frame = 3
Query:  141 LVMNFYKDTCPQAEDIIKEQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLLDSTRKTLSEKEMDRSFG-MRNFRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLEGFAAIGIDAPGLVALLGSHSVGRTHCVKLVHRLYPEVDPALNPDHVPHMLHKCPDXIPDPKAVQYVXXDRGTPMVLGHNYYRNILDNKGLMMVDHQL 875
            L   FY  +CP+A   IK  V            S LR  FHDC    CDAS+LL     T  E+    + G +R F  I+NIK  +E  C   VSCADIL ++ RD VVALGGP   +  GRRD   + A +    LP  + S S +   F    ++   +VAL G+H++G+  C     R+Y   D  +N      +   CP              D  TP    + YY N+L  KGL+  D  L
Sbjct:   25 LSSTFYDTSCPRALVAIKSGVAAAVSSDPRMGASLLRLHFHDCF--GCDASVLL-----TGMEQNAGPNVGSLRGFGVIDNIKTQLESVCKQTVSCADILTVAARDSVVALGGPSWTVPLGRRDSTTASASLANSDLPGPSSSRSQLEAAFLKKNLNTVDMVALSGAHTIGKAQCSNFRTRIYGG-DTNINTAFATSLKANCPQ---SGGNTNLANLDTMTPNAFDNAYYTNLLSQKGLLHSDQVL 259          
BLAST of CK934017 vs. ExPASy Swiss-Prot
Match: PER69_ARATH (Peroxidase 69 OS=Arabidopsis thaliana GN=PER69 PE=1 SV=1)

HSP 1 Score: 115.161 bits (287), Expect = 5.086e-25
Identity = 73/205 (35.61%), Postives = 105/205 (51.22%), Query Frame = 3
Query:  147 MNFYKDTCPQAEDIIKEQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLLDSTRKTLSEKEMDRSFGMRNFRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLEGFAAIGIDAPGLVALLGSHSVGRTHCVKLVHRLY-----PEVDPALNPDHVPHMLHKCP 746
            + FY + C   E I++  V+   +     A   LR  FHDC V  CD S+LL       SE+    +  +R F  IE  K  +E+ CP  VSCADIL L+ RD VV  GG    +  GR DGR S+A   +  LP  +DS++   + FAA  ++   LV L+G H++G   C  +  R        + DP+++P  VP +L +CP
Sbjct:   39 VGFYGNRCRNVESIVRSVVQSHVRSIPANAPGILRMHFHDCFVHGCDGSVLLAGNT---SERTAVPNRSLRGFEVIEEAKARLEKACPRTVSCADILTLAARDAVVLTGGQRWEVPLGRLDGRISQAS--DVNLPGPSDSVAKQKQDFAAKTLNTLDLVTLVGGHTIGTAGCGLVRGRFVNFNGTGQPDPSIDPSFVPLILAQCP 238          
BLAST of CK934017 vs. ExPASy Swiss-Prot
Match: PER1_SORBI (Cationic peroxidase SPC4 (Fragment) OS=Sorghum bicolor PE=1 SV=1)

HSP 1 Score: 114.775 bits (286), Expect = 6.643e-25
Identity = 68/176 (38.64%), Postives = 101/176 (57.39%), Query Frame = 3
Query:  135 PGLVMNFYKDTCPQAEDIIKEQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLLDSTRKTLSEKEMDRSFGMR--NFRYIENIKEAVERECPG-VVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRK--SRAEILEQYLPDHNDSMSVVLEGFAAIGIDAPGLVALLGSHSV 647
            PGL  +FYK +CP+AE I++  V+   +R    A   LR  FHDC VQ CDAS+LLD +     E++   +  +R   F+ I +I + + +EC G VVSC+D+L L+ RD VV  GGP   +  GRRD     ++ ++L   LP    ++  +L   + I +DA  LVAL G H++
Sbjct:   39 PGLSFDFYKRSCPKAESIVRSFVQDAVRRDVGLAAGLLRLHFHDCFVQGCDASVLLDGSATGPGEQQAPPNLTLRPTAFKAINDIHDRLHKECGGTVVSCSDVLALAARDSVVVSGGPSYKVPLGRRDSASFATQQDVLSG-LPPPTAAVPALLAVLSKINLDATDLVALSGGHTI 213          
BLAST of CK934017 vs. ExPASy Swiss-Prot
Match: PERA_IPOBA (Anionic peroxidase OS=Ipomoea batatas PE=1 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 1.693e-20
Identity = 70/231 (30.30%), Postives = 107/231 (46.32%), Query Frame = 3
Query:  189 IKEQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLLDSTRKTLSEKEM-DRSFGMRNFRYIENIKEAVERECPGV-VSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLEGFAAIGIDAPGLVALLGSHSVGRTHCVKLVHRLYPEVDPALNPDHVPHMLHKCPDXIPDPKAVQYVXXDRGTPMVLGHNYYRNILDNKGLMMVDHQL 875
            +KE V            S +R  FHDC V  CDA LLL+ T     E+     +  +R F  IE  K+ V+ + P + VSCADIL ++ RD      G    +  GR+D R +        L   N++++  L  FAA G +   +VALLGSH++G   C  L       +   +NP  V  +   C   +    A   V  D  TP      Y+ ++++++GL+  D++L
Sbjct:   75 VKEVVVAAINAEARMGASLIRLFFHDCFVDGCDAGLLLNDTATFTGEQTAAGNNNSVRGFAVIEQAKQNVKTQMPDMSVSCADILSIAARDSFEKFSGSTYTVTLGRKDARTANFTGANTQLVGPNENLTSQLTKFAAKGFNGTEMVALLGSHTIGFARCPLLC------ISTFINPARVSTLNCNCSGTV---NATGLVGLD-PTPTTWDQRYFSDVVNDQGLLFSDNEL 295          
BLAST of CK934017 vs. ExPASy Swiss-Prot
Match: PER2_SOLLC (Suberization-associated anionic peroxidase 2 OS=Solanum lycopersicum GN=TAP2 PE=3 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 3.531e-18
Identity = 64/215 (29.77%), Postives = 97/215 (45.12%), Query Frame = 3
Query:  240 SWLRNIFHDCAVQSCDASLLLDSTRKTLSEKEMD--RSFGMRNFRYIENIKEAVERECPGV-VSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLEGFAAIGIDAPGLVALLGSHSVGRTHCVKLVHRLYPEVDPALNPDHVPHMLHKCPDXIPDPKAVQYVXXDRGTPMVLGHNYYRNILDNKGLMMVDHQL 875
            S +R  FHDC V  CD  +LLD    T + ++     +  +R F  I   K++V   CP + VSCADIL ++ RD +  LGG    +  GR D   +        LP  +D+++V ++ F+        +VAL G+H+VG   C          V  + N +    +   C   + D    Q       TP V    YY N+ +N+G+M  D  L
Sbjct:  102 SLIRLHFHDCFVDGCDGGILLDDINGTFTGEQNSPPNNNSVRGFEVIAQAKQSVVDSCPNISVSCADILAIAARDSLAKLGGQTYTVALGRSDATTANFSGAINQLPAPSDNLTVQIQKFSDKNFTVREMVALAGAHTVGFARC--------STVCTSGNVNPAAQLQCNCSATLTDSDLQQL----DTTPAVFDKVYYDNLNNNQGIMFSDQVL 304          
BLAST of CK934017 vs. ExPASy Swiss-Prot
Match: PER1_SOLLC (Suberization-associated anionic peroxidase 1 OS=Solanum lycopersicum GN=TAP1 PE=3 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 1.027e-17
Identity = 65/215 (30.23%), Postives = 95/215 (44.19%), Query Frame = 3
Query:  240 SWLRNIFHDCAVQSCDASLLLDSTRKTLSEKEMD--RSFGMRNFRYIENIKEAVERECPGV-VSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLEGFAAIGIDAPGLVALLGSHSVGRTHCVKLVHRLYPEVDPALNPDHVPHMLHKCPDXIPDPKAVQYVXXDRGTPMVLGHNYYRNILDNKGLMMVDHQL 875
            S +R  FHDC V  CD  +LLD    T + ++     +   R +  I   K++V   CP V VSCADIL ++ RD V  LGG    +  GR D R +        LP   D+++V ++ F+        +VAL G+H+VG   C          V  + N +    +   C   + D    Q       TP +    YY N+  N+G+M  D  L
Sbjct:  103 SLIRLHFHDCFVDGCDGGILLDDINGTFTGEQNSPPNANSARGYEVIAQAKQSVINTCPNVSVSCADILAIAARDSVAKLGGQTYSVALGRSDARTANFSGAINQLPAPFDNLTVQIQKFSDKNFTLREMVALAGAHTVGFARC--------STVCTSGNVNPAAQLQCNCSATLTDSDLQQL----DTTPTMFDKVYYDNLNSNQGIMFSDQVL 305          
BLAST of CK934017 vs. ExPASy Swiss-Prot
Match: PERX_SOLTU (Suberization-associated anionic peroxidase OS=Solanum tuberosum PE=2 SV=2)

HSP 1 Score: 87.8113 bits (216), Expect = 8.696e-17
Identity = 64/215 (29.77%), Postives = 95/215 (44.19%), Query Frame = 3
Query:  240 SWLRNIFHDCAVQSCDASLLLDSTRKTLSEKEMD--RSFGMRNFRYIENIKEAVERECPGV-VSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLEGFAAIGIDAPGLVALLGSHSVGRTHCVKLVHRLYPEVDPALNPDHVPHMLHKCPDXIPDPKAVQYVXXDRGTPMVLGHNYYRNILDNKGLMMVDHQL 875
            S +R  FHDC V  CD  +LLD    T + ++     +   R +  I   K++V   CP + VSCADIL ++ RD V  LGG    +  GR D R +        LP   D+++V ++ F         +VAL G+H+VG   C          V  + N +    +   C   + D    Q       TP +    YY N+ +N+G+M  D  L
Sbjct:  102 SLIRLHFHDCFVDGCDGGILLDDINGTFTGEQNSPPNANSARGYEVIAQAKQSVIDTCPNISVSCADILAIAARDSVAKLGGQTYNVALGRSDARTANFTGALTQLPAPFDNLTVQIQKFNDKNFTLREMVALAGAHTVGFARC--------STVCTSGNVNPAAQLQCNCSATLTDSDLQQL----DTTPTMFDKVYYDNLNNNQGIMFSDQVL 304          
BLAST of CK934017 vs. ExPASy Swiss-Prot
Match: PERN_IPOBA (Neutral peroxidase OS=Ipomoea batatas PE=1 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 1.388e-14
Identity = 61/231 (26.41%), Postives = 93/231 (40.26%), Query Frame = 3
Query:  189 IKEQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLLDSTRKTLSEKEMD-RSFGMRNFRYIENIKEAVERECPGV-VSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLEGFAAIGIDAPGLVALLGSHSVGRTHCVKLVHRLYPEVDPALNPDHVPHMLHKCPDXIPDPKAVQYVXXDRGTPMVLGHNYYRNILDNKGLMMVDHQL 875
            +KE V            S +R  FHDC V  CD  +LL+ T     E+     S  +R F  I+  K   + +C    VSCAD+L ++ RD           +  GR+D R +        LP   D++S+    FA  G +   +V L G+H+VG + C  L           LN +    +   CP    D   V        +P      Y+  ++  +GL+  D +L
Sbjct:   76 VKEIVDAAITAETRMGASLIRLHFHDCFVDGCDGGILLNDTANFTGEQGAPANSNSVRGFSVIDQAKRNAQTKCADTPVSCADVLAIAARDAFRKFTNQTYNITLGRQDARTANLTGANTQLPAPFDNLSIQTAKFADKGFNQREMVVLAGAHTVGFSRCAVLC------TSTNLNQNRSATLQCTCPASANDTGLVGL----DPSPGTFDKKYFEELVKGQGLLFSDQEL 296          
The following BLAST results are available for this feature:
BLAST of CK934017 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 108
Match NameE-valueIdentityDescription
PER1_WHEAT2.697e-2634.15Peroxidase OS=Triticum aestivum PE=2 SV=1[more]
PER69_ARATH5.086e-2535.61Peroxidase 69 OS=Arabidopsis thaliana GN=PER69 PE=... [more]
PER1_SORBI6.643e-2538.64Cationic peroxidase SPC4 (Fragment) OS=Sorghum bic... [more]
PERA_IPOBA1.693e-2030.30Anionic peroxidase OS=Ipomoea batatas PE=1 SV=1[more]
PER2_SOLLC3.531e-1829.77Suberization-associated anionic peroxidase 2 OS=So... [more]
PER1_SOLLC1.027e-1730.23Suberization-associated anionic peroxidase 1 OS=So... [more]
PERX_SOLTU8.696e-1729.77Suberization-associated anionic peroxidase OS=Sola... [more]
PERN_IPOBA1.388e-1426.41Neutral peroxidase OS=Ipomoea batatas PE=1 SV=1[more]

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Properties
Property NameValue
Genbank descriptionCGF1004542_D03 Developing fruit peel at 38 DAFB Citrus sinensis cDNA clone P38DAB10001_IVF_D03 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK934017 ID=CK934017; Name=CK934017; organism=Citrus sinensis; type=EST; length=876bp
GGGGAAGGTTGGTCACCTTTAGTGAGTGAAGAGTAGAAGAGAAAATGGGT
ACGAAAGCTGTCTTCTTGCTTTTAGCTTTGCTATCCTTCTCAGCTGTGTC
TCTGAGGTCTGCTTTGGCAGAAAATGAGGAGGACCCAGGTCTTGTTATGA
ATTTTTACAAGGATACATGCCCTCAGGCCGAGGACATTATCAAGGAACAA
GTTAAGCTTCTGTACAAGCGCCACAAGAACACTGCATTTTCTTGGCTTAG
AAACATTTTCCATGACTGTGCTGTCCAGTCTTGTGATGCTTCACTGCTTC
TGGACTCGACAAGAAAGACCTTGTCTGAGAAGGAGATGGACAGGAGCTTT
GGTATGAGGAACTTCAGGTACATTGAGAACATCAAAGAAGCTGTTGAAAG
AGAGTGCCCTGGTGTTGTTTCCTGTGCTGATATTCTTGTCCTGTCCGGTA
GAGATGGCGTTGTTGCGCTTGGAGGCCCTTACATTCCTCTCAAGACAGGA
AGAAGAGATGGTAGAAAAAGCAGAGCAGAGATACTTGAGCAGTATCTCCC
AGATCACAACGACAGCATGTCTGTTGTTCTTGAGGGGTTTGCAGCCATTG
GCATTGACGCCCCTGGACTTGTTGCTCTGCTAGGATCTCACAGTGTTGGC
AGAACTCATTGTGTGAAGCTGGTGCACCGTCTGTACCCAGAAGTTGACCC
TGCACTGAACCCTGACCATGTTCCGCATATGCTCCATAAGTGTCCTGATG
NCATCCCAGACCCCAAGGCTGTTCAGTATGTNNNNNNTGACCGTGGCACA
CCCATGGTGCTGGGACACAACTACTATAGGAACATATTGGACAACAAGGG
CTTGATGATGGTTGATCATCAGCTAG
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