CK934022

Overview
NameCK934022
Unique NameCK934022
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length656
Libraries
Library NameType
Developing fruit peel at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK934022 vs. ExPASy Swiss-Prot
Match: FAHD2_XENLA (Fumarylacetoacetate hydrolase domain-containing protein 2 OS=Xenopus laevis GN=fahd2 PE=2 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 4.235e-22
Identity = 60/156 (38.46%), Postives = 84/156 (53.85%), Query Frame = 2
Query:    2 EPVLFLKPTSSYLGNGGTIEVPHPLDSLHHEVELAVVIGQKARDVPETTAMDYVGGYAVALDMTAREIQSS--------------------AKLPKSAVPDPHNLELWLKVDGEIRQKGSTKDMIFKIPYLISHISSIMTLFEGDVILTGTPQGVG 409
            EP++F K  SS +G    I +P     +  E ELA VIG+K +++ E  AMD+V GY VA D++AR+ Q                      A + K  + DPHNL +  +V+G++ Q  +T  M+FK   LI+  S  +TL  GDV LTGTP GVG
Sbjct:  134 EPIIFNKFASSIVGPSDPIRIPEESQEVDWEAELAFVIGKKGKNIKEEDAMDHVVGYTVAHDVSARDWQMKKNGKQWLLGKTFDTFCPLGPALVTKDVISDPHNLGIRCRVNGDLVQNSNTNQMVFKTEALIAWASKFVTLNPGDVFLTGTPPGVG 289          
BLAST of CK934022 vs. ExPASy Swiss-Prot
Match: YISK_BACSU (Uncharacterized protein yisK OS=Bacillus subtilis GN=yisK PE=2 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 1.043e-20
Identity = 59/154 (38.31%), Postives = 86/154 (55.84%), Query Frame = 2
Query:    5 PVLFLKPTSSYLGNGGTIEVPHPLDS-LHHEVELAVVIGQKARDVPETTAMDYVGGYAVALDMTAREIQSSAK------------------LPKSAVPDPHNLELWLKVDGEIRQKGSTKDMIFKIPYLISHISSIMTLFEGDVILTGTPQGVG 409
            P++F K   +  G+G  ++    + S L +E ELAVVIG+    + +  A D+V GY +  D+TAR++Q   K                  + KS++ +P  L++  +V+GE+RQ GS  DMIF IP LI  +S  MTL  GD+I TGTP GVG
Sbjct:  118 PMVFTKSPVTVTGHGDIVKSHEEVTSQLDYEGELAVVIGKSGTRISKEDAYDHVFGYTIVNDITARDLQKRHKQFFIGKSLDTTCPMGPVLVHKSSIQEPERLKVETRVNGELRQSGSASDMIFSIPELIETLSKGMTLEAGDIIATGTPSGVG 271          
BLAST of CK934022 vs. ExPASy Swiss-Prot
Match: FAHD2_DICDI (Fumarylacetoacetate hydrolase domain-containing protein 2 homolog OS=Dictyostelium discoideum GN=fahd2 PE=3 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 1.506e-19
Identity = 56/167 (33.53%), Postives = 88/167 (52.69%), Query Frame = 2
Query:    2 EPVLFLKPTSSYLGNGGTIEVPHPLDSLHHEVELAVVIGQKARDVPETTAMDYVGGYAVALDMTAREIQ----------------------------SSAKLPKSAVPDPHNLELWLKVDGEIRQKGSTKDMIFKIPYLISHISSIMTLFEGDVILTGTPQGVGPVK 418
            EP++F K  ++  G   +I  P   D + +EVEL VVIG++A++V E+ A+ YV GY V  D++AR+ Q                              A L      DP+NL +   ++G++ Q  +TK+ IF I  ++S++S + TL  GD+I TGTP GVG ++
Sbjct:  111 EPIVFSKFDNAICGPNDSIIKPVESDEVDYEVELVVVIGKQAKNVSESDALQYVAGYTVGNDVSARDWQLRKNNSQWLLGKTFDTFAPIGPSIVINPEVAALSDDTYFDPNNLSIKCTLNGQVVQNSTTKEFIFNIQTVVSYLSKLFTLNPGDIIFTGTPSGVGFIR 277          
BLAST of CK934022 vs. ExPASy Swiss-Prot
Match: Y973_STAAC (Uncharacterized protein SACOL0973 OS=Staphylococcus aureus (strain COL) GN=SACOL0973 PE=3 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 1.967e-19
Identity = 58/152 (38.16%), Postives = 79/152 (51.97%), Query Frame = 2
Query:   11 LFLKPTSSYLGNGGTIEVPHPL-DSLHHEVELAVVIGQKARDVPETTAMDYVGGYAVALDMTAREIQSSAK------------------LPKSAVPDPHNLELWLKVDGEIRQKGSTKDMIFKIPYLISHISSIMTLFEGDVILTGTPQGVG 409
            +F K  SS  G+  TI     + D L +E EL +VIG+    +P+  A+DYV GY +  D+T R+ QS                     + K  +P P N+ +  KV+ EIRQ G+T +MI KI  LI  IS  + L  GD+I TGTP GVG
Sbjct:  118 VFTKAASSLTGDNATIPNHKDITDQLDYEGELGIVIGKSGEKIPKALALDYVYGYTIINDITDRKAQSEQDQAFLSKSLTGGCPMGPYIVTKDELPLPENVNIVTKVNNEIRQDGNTGEMILKIDELIEEISKYVALHPGDIIATGTPAGVG 269          
BLAST of CK934022 vs. ExPASy Swiss-Prot
Match: Y968_STAAM (Uncharacterized protein SAV0968 OS=Staphylococcus aureus (strain Mu50 / ATCC 700699) GN=SAV0968 PE=1 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 1.967e-19
Identity = 58/152 (38.16%), Postives = 79/152 (51.97%), Query Frame = 2
Query:   11 LFLKPTSSYLGNGGTIEVPHPL-DSLHHEVELAVVIGQKARDVPETTAMDYVGGYAVALDMTAREIQSSAK------------------LPKSAVPDPHNLELWLKVDGEIRQKGSTKDMIFKIPYLISHISSIMTLFEGDVILTGTPQGVG 409
            +F K  SS  G+  TI     + D L +E EL +VIG+    +P+  A+DYV GY +  D+T R+ QS                     + K  +P P N+ +  KV+ EIRQ G+T +MI KI  LI  IS  + L  GD+I TGTP GVG
Sbjct:  118 VFTKAASSLTGDNATIPNHKDITDQLDYEGELGIVIGKSGEKIPKALALDYVYGYTIINDITDRKAQSEQDQAFLSKSLTGGCPMGPYIVTKDELPLPENVNIVTKVNNEIRQDGNTGEMILKIDELIEEISKYVALHPGDIIATGTPAGVG 269          
BLAST of CK934022 vs. ExPASy Swiss-Prot
Match: Y906_STAA8 (Uncharacterized protein SAOUHSC_00906 OS=Staphylococcus aureus (strain NCTC 8325) GN=SAOUHSC_00906 PE=3 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 1.967e-19
Identity = 58/152 (38.16%), Postives = 79/152 (51.97%), Query Frame = 2
Query:   11 LFLKPTSSYLGNGGTIEVPHPL-DSLHHEVELAVVIGQKARDVPETTAMDYVGGYAVALDMTAREIQSSAK------------------LPKSAVPDPHNLELWLKVDGEIRQKGSTKDMIFKIPYLISHISSIMTLFEGDVILTGTPQGVG 409
            +F K  SS  G+  TI     + D L +E EL +VIG+    +P+  A+DYV GY +  D+T R+ QS                     + K  +P P N+ +  KV+ EIRQ G+T +MI KI  LI  IS  + L  GD+I TGTP GVG
Sbjct:  118 VFTKAASSLTGDNATIPNHKDITDQLDYEGELGIVIGKSGEKIPKALALDYVYGYTIINDITDRKAQSEQDQAFLSKSLTGGCPMGPYIVTKDELPLPENVNIVTKVNNEIRQDGNTGEMILKIDELIEEISKYVALHPGDIIATGTPAGVG 269          
BLAST of CK934022 vs. ExPASy Swiss-Prot
Match: Y871_STAA3 (Uncharacterized protein SAUSA300_0871 OS=Staphylococcus aureus (strain USA300) GN=SAUSA300_0871 PE=3 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 1.967e-19
Identity = 58/152 (38.16%), Postives = 79/152 (51.97%), Query Frame = 2
Query:   11 LFLKPTSSYLGNGGTIEVPHPL-DSLHHEVELAVVIGQKARDVPETTAMDYVGGYAVALDMTAREIQSSAK------------------LPKSAVPDPHNLELWLKVDGEIRQKGSTKDMIFKIPYLISHISSIMTLFEGDVILTGTPQGVG 409
            +F K  SS  G+  TI     + D L +E EL +VIG+    +P+  A+DYV GY +  D+T R+ QS                     + K  +P P N+ +  KV+ EIRQ G+T +MI KI  LI  IS  + L  GD+I TGTP GVG
Sbjct:  118 VFTKAASSLTGDNATIPNHKDITDQLDYEGELGIVIGKSGEKIPKALALDYVYGYTIINDITDRKAQSEQDQAFLSKSLTGGCPMGPYIVTKDELPLPENVNIVTKVNNEIRQDGNTGEMILKIDELIEEISKYVALHPGDIIATGTPAGVG 269          
BLAST of CK934022 vs. ExPASy Swiss-Prot
Match: Y850_STAAW (Uncharacterized protein MW0850 OS=Staphylococcus aureus (strain MW2) GN=MW0850 PE=3 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 1.967e-19
Identity = 58/152 (38.16%), Postives = 79/152 (51.97%), Query Frame = 2
Query:   11 LFLKPTSSYLGNGGTIEVPHPL-DSLHHEVELAVVIGQKARDVPETTAMDYVGGYAVALDMTAREIQSSAK------------------LPKSAVPDPHNLELWLKVDGEIRQKGSTKDMIFKIPYLISHISSIMTLFEGDVILTGTPQGVG 409
            +F K  SS  G+  TI     + D L +E EL +VIG+    +P+  A+DYV GY +  D+T R+ QS                     + K  +P P N+ +  KV+ EIRQ G+T +MI KI  LI  IS  + L  GD+I TGTP GVG
Sbjct:  118 VFTKAASSLTGDNATIPNHKDITDQLDYEGELGIVIGKSGEKIPKALALDYVYGYTIINDITDRKAQSEQDQAFLSKSLTGGCPMGPYIVTKDELPLPENVNIVTKVNNEIRQDGNTGEMILKIDELIEEISKYVALHPGDIIATGTPAGVG 269          
BLAST of CK934022 vs. ExPASy Swiss-Prot
Match: Y838_STAAS (Uncharacterized protein SAS0838 OS=Staphylococcus aureus (strain MSSA476) GN=SAS0838 PE=3 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 1.967e-19
Identity = 58/152 (38.16%), Postives = 79/152 (51.97%), Query Frame = 2
Query:   11 LFLKPTSSYLGNGGTIEVPHPL-DSLHHEVELAVVIGQKARDVPETTAMDYVGGYAVALDMTAREIQSSAK------------------LPKSAVPDPHNLELWLKVDGEIRQKGSTKDMIFKIPYLISHISSIMTLFEGDVILTGTPQGVG 409
            +F K  SS  G+  TI     + D L +E EL +VIG+    +P+  A+DYV GY +  D+T R+ QS                     + K  +P P N+ +  KV+ EIRQ G+T +MI KI  LI  IS  + L  GD+I TGTP GVG
Sbjct:  118 VFTKAASSLTGDNATIPNHKDITDQLDYEGELGIVIGKSGEKIPKALALDYVYGYTIINDITDRKAQSEQDQAFLSKSLTGGCPMGPYIVTKDELPLPENVNIVTKVNNEIRQDGNTGEMILKIDELIEEISKYVALHPGDIIATGTPAGVG 269          
BLAST of CK934022 vs. ExPASy Swiss-Prot
Match: Y837_STAAB (Uncharacterized protein SAB0837 OS=Staphylococcus aureus (strain bovine RF122 / ET3-1) GN=SAB0837 PE=3 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 1.967e-19
Identity = 58/152 (38.16%), Postives = 79/152 (51.97%), Query Frame = 2
Query:   11 LFLKPTSSYLGNGGTIEVPHPL-DSLHHEVELAVVIGQKARDVPETTAMDYVGGYAVALDMTAREIQSSAK------------------LPKSAVPDPHNLELWLKVDGEIRQKGSTKDMIFKIPYLISHISSIMTLFEGDVILTGTPQGVG 409
            +F K  SS  G+  TI     + D L +E EL +VIG+    +P+  A+DYV GY +  D+T R+ QS                     + K  +P P N+ +  KV+ EIRQ G+T +MI KI  LI  IS  + L  GD+I TGTP GVG
Sbjct:  118 VFTKAASSLTGDNATIPNHKDITDQLDYEGELGIVIGKSGEKIPKALALDYVYGYTIINDITDRKAQSEQDQAFLSKSLTGGCPMGPYIVTKDELPLPENVNIVTKVNNEIRQDGNTGEMILKIDELIEEISKYVALHPGDIIATGTPAGVG 269          
The following BLAST results are available for this feature:
BLAST of CK934022 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 47
Match NameE-valueIdentityDescription
FAHD2_XENLA4.235e-2238.46Fumarylacetoacetate hydrolase domain-containing pr... [more]
YISK_BACSU1.043e-2038.31Uncharacterized protein yisK OS=Bacillus subtilis ... [more]
FAHD2_DICDI1.506e-1933.53Fumarylacetoacetate hydrolase domain-containing pr... [more]
Y973_STAAC1.967e-1938.16Uncharacterized protein SACOL0973 OS=Staphylococcu... [more]
Y968_STAAM1.967e-1938.16Uncharacterized protein SAV0968 OS=Staphylococcus ... [more]
Y906_STAA81.967e-1938.16Uncharacterized protein SAOUHSC_00906 OS=Staphyloc... [more]
Y871_STAA31.967e-1938.16Uncharacterized protein SAUSA300_0871 OS=Staphyloc... [more]
Y850_STAAW1.967e-1938.16Uncharacterized protein MW0850 OS=Staphylococcus a... [more]
Y838_STAAS1.967e-1938.16Uncharacterized protein SAS0838 OS=Staphylococcus ... [more]
Y837_STAAB1.967e-1938.16Uncharacterized protein SAB0837 OS=Staphylococcus ... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004542_D10 Developing fruit peel at 38 DAFB Citrus sinensis cDNA clone P38DAB10001_IVF_D10 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK934022 ID=CK934022; Name=CK934022; organism=Citrus sinensis; type=EST; length=656bp
GGAGCCGGTTTTGTTTCTCAAACCGACGTCGTCTTATTTAGGAAACGGAG
GGACCATCGAGGTACCTCATCCCCTGGATTCGCTTCATCATGAAGTGGAG
CTTGCAGTCGTGATCGGACAGAAAGCTCGAGATGTGCCTGAAACCACTGC
CATGGACTATGTTGGAGGCTATGCAGTGGCACTTGATATGACTGCGAGGG
AAATCCAATCTTCTGCCAAGCTACCAAAGTCAGCAGTGCCTGACCCTCAC
AACTTGGAACTATGGTTAAAGGTTGATGGAGAGATTCGACAGAAAGGCTC
CACTAAGGATATGATTTTTAAGATACCATATCTAATTAGCCACATAAGTT
CAATTATGACACTTTTTGAAGGAGATGTCATATTAACAGGCACTCCACAG
GGCGTTGGCCCTGTAAAAGTTGGTCAAAAGATAACAGCTGGTATAACGGG
CCTCCTGGATGTAAACTTTGATATTGTAAAACGCCGAAGGCCAGGAAGTG
CTTGAACTTATGATGTCCACTCCACTGCAACTGCATTTCAAGCAAAATGT
ACACAAAATTTTCGAGGTGACCCTGACTCATAGCCCTAGCCCGATTTGGC
CATTGACATCCCCACGATTAAGCCTGTATTGATTTCGTCATAACCCTACG
AGGTTG
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