CK934024
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CK934024 vs. ExPASy Swiss-Prot
Match: PSAL_EMIHU (Photosystem I reaction center subunit XI OS=Emiliania huxleyi GN=psaL PE=3 SV=1) HSP 1 Score: 110.923 bits (276), Expect = 8.698e-24 Identity = 58/150 (38.67%), Postives = 80/150 (53.33%), Query Frame = 1 Query: 196 QVIQPINGDPFIGSLETPITSSPLIAWYLSNLPAYRTAVSPLLRGVEVGLAHGFLLVGPFVKAGPLRNTEIXXXXXXXXXXXXVVILSICLTIYGIASFSEGEPSTAPGLTLTGRKKEPDQLQTADGWAKXXXXXXXXXISGVIWAYFLL 645 + ++P N DPF+G+L TP+T+S YL NLP YR +SPLLRG+E+G+AHG+ L+GPF GPLRN+ ++IL++ LTIYG+ASF E + L++A GW G AY LL Sbjct: 3 EFVKPYNNDPFVGNLSTPVTTSTATKLYLGNLPIYRKGLSPLLRGLEIGMAHGYFLIGPFYILGPLRNSPNALLVGLFSAFGLILILTLGLTIYGLASFQGTEGG--------------ENLESAKGWRNFTSGFSIGAFGGASVAYVLL 138
BLAST of CK934024 vs. ExPASy Swiss-Prot
Match: PSAL_ANASP (Photosystem I reaction center subunit XI OS=Anabaena sp. (strain PCC 7120) GN=psaL PE=3 SV=1) HSP 1 Score: 110.538 bits (275), Expect = 1.136e-23 Identity = 58/159 (36.48%), Postives = 84/159 (52.83%), Query Frame = 1 Query: 166 KAIQSEKPTYQVIQPINGDPFIGSLETPITSSPLIAWYLSNLPAYRTAVSPLLRGVEVGLAHGFLLVGPFVKAGPLRNTEIXXXXXXXXXXXXVVILSICLTIYGIASFSEGEPSTAPGLTLTGRKKEPDQLQTADGWAKXXXXXXXXXISGVIWAYFL 642 K + S+ +V+ P DP G+LETP+ +SPL+ W+++NLPAYR ++P RG+EVG+AHG+ L GPF K GPLR+ VV+ ++ L++Y + P TA L PD Q+ +GW I G + AYFL Sbjct: 9 KNLPSDPRNREVVFPAGRDPQWGNLETPVNASPLVKWFINNLPAYRPGLTPFRRGLEVGMAHGYFLFGPFAKLGPLRDAANANLAGLLGAIGLVVLFTLALSLY-----ANSNPPTA--LASVTVPNPPDAFQSKEGWNNFASAFLIGGIGGAVVAYFL 160
BLAST of CK934024 vs. ExPASy Swiss-Prot
Match: PSAL_MASLA (Photosystem I reaction center subunit XI OS=Mastigocladus laminosus GN=psaL PE=3 SV=1) HSP 1 Score: 110.153 bits (274), Expect = 1.484e-23 Identity = 64/174 (36.78%), Postives = 87/174 (50.00%), Query Frame = 1 Query: 139 SKRSPRFLVKAIQSEKPTYQVIQPINGDPFIGSLETPITSSPLIAWYLSNLPAYRTAVSPLLRGVEVGLAHGFLLVGPFVKAGPLRNTEIXXXXXXXXXXXXVVILSICLTIYGIASFSEGEPSTAPGLTLTGRKKEPDQLQTADGWAKXXXXXXXXXISGVIWAYFLLYVLNL 660 SK SP S+ +V+ P DP IG LETPI SSPL+ W++ NLPAYR ++ RG+EVG+AHG+ + GPF K GPLRNT ++IL+ LT+Y + + S A P+ Q+++GW I G + AYFL L L Sbjct: 8 SKNSP--------SDPRNREVVFPAYRDPQIGDLETPINSSPLVKWFIGNLPAYRPGITTFRRGLEVGMAHGYWIFGPFAKLGPLRNTVNANLAGLLSALGLIIILTGALTLYANSKPPKPVKSVA-------TPNPPEAFQSSEGWNNFASAFLIGGIGGAVVAYFLTSNLEL 166
BLAST of CK934024 vs. ExPASy Swiss-Prot
Match: PSAL_ANAVT (Photosystem I reaction center subunit XI OS=Anabaena variabilis (strain ATCC 29413 / PCC 7937) GN=psaL PE=1 SV=2) HSP 1 Score: 109.768 bits (273), Expect = 1.938e-23 Identity = 56/159 (35.22%), Postives = 84/159 (52.83%), Query Frame = 1 Query: 166 KAIQSEKPTYQVIQPINGDPFIGSLETPITSSPLIAWYLSNLPAYRTAVSPLLRGVEVGLAHGFLLVGPFVKAGPLRNTEIXXXXXXXXXXXXVVILSICLTIYGIASFSEGEPSTAPGLTLTGRKKEPDQLQTADGWAKXXXXXXXXXISGVIWAYFL 642 K + S+ +V+ P DP G+LETP+ +SPL+ W+++NLPAYR ++P RG+EVG+AHG+ L GPF K GPLR+ VV+ ++ L++Y + P +T+ PD Q+ +GW I G + AYFL Sbjct: 9 KNLPSDPRNREVVFPAGRDPQWGNLETPVNASPLVKWFINNLPAYRPGLTPFRRGLEVGMAHGYFLFGPFAKLGPLRDAANANLAGLLGAIGLVVLFTLSLSLYA----NSNPPKALASVTV---PNPPDAFQSKEGWNNFASAFLIGGIGGAVVAYFL 160
BLAST of CK934024 vs. ExPASy Swiss-Prot
Match: PSAL_NOSP7 (Photosystem I reaction center subunit XI OS=Nostoc punctiforme (strain ATCC 29133 / PCC 73102) GN=psaL PE=3 SV=1) HSP 1 Score: 105.916 bits (263), Expect = 2.798e-22 Identity = 56/159 (35.22%), Postives = 84/159 (52.83%), Query Frame = 1 Query: 166 KAIQSEKPTYQVIQPINGDPFIGSLETPITSSPLIAWYLSNLPAYRTAVSPLLRGVEVGLAHGFLLVGPFVKAGPLRNTEIXXXXXXXXXXXXVVILSICLTIYGIASFSEGEPSTAPGLTLTGRKKEPDQLQTADGWAKXXXXXXXXXISGVIWAYFL 642 K + S+ +V+ P DP +G+LETP+ +SPL W+++NLPAYR +SP RG+EVG+AHG+ + GPF K GPLR+T+ VV+L+ L++Y + P P +T+ D + + W I G + AYFL Sbjct: 9 KNLPSDPRNREVVFPAFRDPQLGNLETPVNASPLSKWFINNLPAYRPGLSPARRGLEVGMAHGYWIFGPFAKLGPLRDTDNANLAGLLAAIGLVVLLTGALSLYS----NSNPPKALPSVTVP--NPPVDAFNSKESWNNFASSFLIGGIGGAVVAYFL 161
BLAST of CK934024 vs. ExPASy Swiss-Prot
Match: PSAL_SYNE7 (Photosystem I reaction center subunit XI OS=Synechococcus elongatus (strain PCC 7942) GN=psaL PE=3 SV=1) HSP 1 Score: 105.531 bits (262), Expect = 3.654e-22 Identity = 61/162 (37.65%), Postives = 84/162 (51.85%), Query Frame = 1 Query: 217 GDPFIGSLETPITSSPLIAWYLSNLPAYRTAVSPLLRGVEVGLAHGFLLVGPFVKAGPLRNTEIXXXXXXXXXXXXVVILSICLTIYGIASFSEGEPSTAPGLTLTGRKKEPDQLQTADGWAKXXXXXXXXXISGVIWAYFLLYVLNLPYFVK*KYVTSTLW 702 G P IG+L TPI SSP +++ LP YR +S RG+E+G+AHGFLL GPF GPLRNTE VVIL++CL++YG A PS A T P +L T +GW++ + G A+F Y+ + PY + + +W Sbjct: 10 GTPEIGNLATPINSSPFTRTFINALPIYRRGLSSNRRGLEIGMAHGFLLYGPFSILGPLRNTETAGSAGLLATVGLVVILTVCLSLYGNAG---SGPSAAESTVTT--PNPPQELFTKEGWSEFTSGFILGGLGG---AFFAFYLASTPYVQPLVKIAAGVW 163
BLAST of CK934024 vs. ExPASy Swiss-Prot
Match: PSAL_SYNP6 (Photosystem I reaction center subunit XI OS=Synechococcus sp. (strain ATCC 27144 / PCC 6301 / SAUG 1402/1) GN=psaL PE=1 SV=2) HSP 1 Score: 100.908 bits (250), Expect = 9.001e-21 Identity = 59/162 (36.42%), Postives = 81/162 (50.00%), Query Frame = 1 Query: 217 GDPFIGSLETPITSSPLIAWYLSNLPAYRTAVSPLLRGVEVGLAHGFLLVGPFVKAGPLRNTEIXXXXXXXXXXXXVVILSICLTIYGIASFSEGEPSTAPGLTLTGRKKEPDQLQTADGWAKXXXXXXXXXISGVIWAYFLLYVLNLPYFVK*KYVTSTLW 702 G P IG L TP SSP +++ LP YR +S RG+E+G+AHGFLL GP GPLRNTE VVIL++CL++YG A PS A T P +L T +GW++ + G A+F Y+ + PY + + +W Sbjct: 9 GTPEIGDLATPTNSSPFTRTFINALPIYRRGLSSNRRGLEIGMAHGFLLYGPLSILGPLRNTETAGSAGLLATVGLVVILTVCLSLYGNAG---SGPSAAESTVTT--PNPPQELFTKEGWSEFTSGFILGGLGG---AFFAFYLASTPYVQPLVKIAAGVW 162
BLAST of CK934024 vs. ExPASy Swiss-Prot
Match: PSAL_CYAA5 (Photosystem I reaction center subunit XI OS=Cyanothece sp. (strain ATCC 51142) GN=psaL PE=3 SV=1) HSP 1 Score: 98.2117 bits (243), Expect = 5.834e-20 Identity = 61/146 (41.78%), Postives = 78/146 (53.42%), Query Frame = 1 Query: 217 GDPFIGSLETPITSSPLIAWYLSNLPAYRTAVSPLLRGVEVGLAHGFLLVGPFVKAGPLRNTEIXXXXXXXXXXXXVVILSICLTIYGIASFSEGEPSTAPGLTLTGRKKEPDQLQTADGWAKXXXXXXXXXISGVIWAYFLLYVL 654 GDP IG+L TP+ SS L ++ NLPAYR +S RG+EVG+AHG+ L GPF GPLRNTE + IL+I L++Y AS G+P TLT P+ L T+ GW + GVI+AY L L Sbjct: 8 GDPQIGNLATPVNSSRLSLAFIRNLPAYRRGLSANRRGLEVGMAHGYFLYGPFAILGPLRNTEYASTGGLLSAVAMISILTIALSLY--ASVEVGKPIE----TLT-TPDVPEDLGTSVGWGEFANGFFIGGSGGVIFAYLLCQAL 146
BLAST of CK934024 vs. ExPASy Swiss-Prot
Match: PSAL_SYNP2 (Photosystem I reaction center subunit XI OS=Synechococcus sp. (strain ATCC 27264 / PCC 7002 / PR-6) GN=psaL PE=3 SV=1) HSP 1 Score: 93.9745 bits (232), Expect = 1.100e-18 Identity = 52/152 (34.21%), Postives = 76/152 (50.00%), Query Frame = 1 Query: 217 GDPFIGSLETPITSSPLIAWYLSNLPAYRTAVSPLLRGVEVGLAHGFLLVGPFVKAGPLRNTEIXXXXXXXXXXXXVVILSICLTIYGIASFSEGEPSTAPGLTLTGRKKEPDQLQTADGWAKXXXXXXXXXISGVIWAYFLLYVLNLPYFV 672 GDP +G+L TPI +S +++NLP YR +S RG+EVG+AHG+ L GPF GPLRN + + +L++ L++YG S P TLT P+ L T +GW++ G + AY L L + Y + Sbjct: 8 GDPQVGNLATPINASAFSKAFINNLPGYRQGLSAQRRGLEVGMAHGYFLYGPFALLGPLRNADFAGVAGLLGTVGLISLLTLALSLYGSVGVS------TPTATLT-TPNPPENLGTKEGWSEFAAGFLIGGCGGALVAYGLCIALPMMYTI 152
BLAST of CK934024 vs. ExPASy Swiss-Prot
Match: PSAL_PROM4 (Photosystem I reaction center subunit XI OS=Prochlorococcus marinus (strain MIT 9211) GN=psaL PE=3 SV=1) HSP 1 Score: 88.5817 bits (218), Expect = 4.623e-17 Identity = 51/153 (33.33%), Postives = 76/153 (49.67%), Query Frame = 1 Query: 202 IQPINGDPFIGSLETPITSSPLIAWYLSNLPAYRTAVSPLLRGVEVGLAHGFLLVGPFVKAGPLRNTEIXXXXXXXXXXXXVVILSICLTIYGIASFSEGEPSTAPGLTLTGRKKEPDQLQTADGWAKXXXXXXXXXISGVIWAYFLLYVLNL 660 ++P++ DPF+G+LETP+ S +++NLP YR+ +SP RG+EVG A G+LL GPF GPLRNT+ V IL+ +Y + +P+ P + P L T GW G ++A+ L L+L Sbjct: 39 VKPVS-DPFVGNLETPVNSGYFTKAFINNLPFYRSGISPNFRGLEVGAAFGYLLYGPFAMTGPLRNTDFALTAGLLSTIGAVHILTALFVLY---TAPGKDPNVQPSDCTV--ENPPTDLFTRTGWTDFTSGFWLGGCGGAVFAWLLCGTLHL 185 The following BLAST results are available for this feature:
BLAST of CK934024 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 37
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Sequences
The
following sequences are available for this feature:
EST sequence >CK934024 ID=CK934024; Name=CK934024; organism=Citrus sinensis; type=EST; length=819bpback to top |