CK934050

Overview
NameCK934050
Unique NameCK934050
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length847
Libraries
Library NameType
Developing fruit peel at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig9656 contig Csv1_Contig9656:213..1059. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CK934050 vs. ExPASy Swiss-Prot
Match: RAN_SALSA (GTP-binding nuclear protein Ran OS=Salmo salar GN=ran PE=2 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 2.835e-17
Identity = 49/166 (29.52%), Postives = 87/166 (52.41%), Query Frame = 2
Query:  125 FKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHITRWLEELRSHADKNIVIILIGNKSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVN 622
            FK+VL+GD   GK+  + R    EF     AT+GVE           ++K  +WDTAGQE++  +   YY  A  A++++D++ R ++ ++  W  +L     +NI I+L GNK D+++++      +  F +K+ L + + SA    N E  F+ +  ++    N
Sbjct:   10 FKLVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGAIKYNVWDTAGQEKFGGLRDGYYIQAQCAIIMFDVTSRVTYKNVPNWHRDL-VRVCENIPIVLCGNKVDIKDRKV--KAKSIVFHRKKNLQYYDISAKSNYNFEKPFLWLARKLIGDPN 172          
BLAST of CK934050 vs. ExPASy Swiss-Prot
Match: RAN_DANRE (GTP-binding nuclear protein Ran OS=Danio rerio GN=ran PE=2 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 2.835e-17
Identity = 49/166 (29.52%), Postives = 87/166 (52.41%), Query Frame = 2
Query:  125 FKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHITRWLEELRSHADKNIVIILIGNKSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVN 622
            FK+VL+GD   GK+  + R    EF     AT+GVE           ++K  +WDTAGQE++  +   YY  A  A++++D++ R ++ ++  W  +L     +NI I+L GNK D+++++      +  F +K+ L + + SA    N E  F+ +  ++    N
Sbjct:   10 FKLVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGAIKYNVWDTAGQEKFGGLRDGYYIQAQCAIIMFDVTSRVTYKNVPNWHRDL-VRVCENIPIVLCGNKVDIKDRKV--KAKSIVFHRKKNLQYYDISAKSNYNFEKPFLWLARKLIGDPN 172          
BLAST of CK934050 vs. ExPASy Swiss-Prot
Match: RAB7B_DICDI (Ras-related protein Rab-7B OS=Dictyostelium discoideum GN=rab7B PE=3 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 2.835e-17
Identity = 54/171 (31.58%), Postives = 94/171 (54.97%), Query Frame = 2
Query:  122 VFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHITRWLEELRSHADKNIVI----ILIGNKSDLEEQRAVPTEDAKEFAQKE---GLFFLETSALEATNVENAFMTVLTEIFN 613
            + KVV+IG+ +VGK+ IL R+    F +  K TIGV+F    +++    V  Q+WDT+GQER+R++  +YYRGA   +LV+D++  ++   +  W ++     +    I    I++GNK D +  R V  + A ++ +      L + +TSA +  N+E  F  +  +  N
Sbjct:    7 IIKVVIIGEKSVGKTSILRRYVDKRF-VTLKPTIGVDF----VMVSENMVTLQLWDTSGQERFRSLEISYYRGADYCILVFDVTNEKTLYDLKLWRDDFIEKTEIRDPILFPFIILGNKID-DPNRVVTEKAAIQWCKDNIGGNLTYFDTSAKDNINIEQVFKHISNQCEN 171          
BLAST of CK934050 vs. ExPASy Swiss-Prot
Match: RSR1_CANAL (Ras-related protein RSR1 OS=Candida albicans GN=RSR1 PE=3 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 3.703e-17
Identity = 53/163 (32.52%), Postives = 89/163 (54.60%), Query Frame = 2
Query:  125 FKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHITRWLEE-LRSHADKNIVIILIGNKSDLEEQRAVPTEDAKEFAQKEGLF-FLETSALEATNVENAFMTVLTEI 607
            +KVV++G   VGKS I  +F +  +      TI   ++ + + +  ++   +I DTAG  ++ A+   Y +   G +LVY ++   S   +    E+ LR     N+ ++L+GNK DLE+ R +  ED  + +Q  GL  F ETSA+  TNV+ AF+ V+ +I
Sbjct:    4 YKVVVLGAGGVGKSSITVQFVQGVYVESYDPTIEDSYR-KQIEVDGRACDLEILDTAGVAQFTAMRELYIKSGKGFLLVYSVTDENSLKELLALREQVLRIKDSDNVPMVLVGNKCDLEDDRVLSIEDGVKVSQDWGLVPFYETSAMYKTNVDEAFIDVVRQI 165          
BLAST of CK934050 vs. ExPASy Swiss-Prot
Match: RASH_MOUSE (GTPase HRas OS=Mus musculus GN=Hras1 PE=1 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 3.703e-17
Identity = 53/162 (32.72%), Postives = 93/162 (57.41%), Query Frame = 2
Query:  125 FKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHITRWLEELRSHADK-NIVIILIGNKSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEI 607
            +K+V++G   VGKS +  +  +N F  +   TI   ++ + +VI  ++      DTAGQE Y A+   Y R   G + V+ I+  +SF+ I ++ E+++   D  ++ ++L+GNK DL   R V +  A++ A+  G+ ++ETSA     VE+AF T++ EI
Sbjct:    4 YKLVVVGAGGVGKSALTIQLIQNHFVDEYDPTIEDSYR-KQVVIDGETCLLDYLDTAGQEEYSAMRDQYMRTGEGFLCVFAINNTKSFEDIHQYREQIKRVKDSDDVPMVLVGNKCDL-AARTVESRQAQDLARSYGIPYIETSAKTRQGVEDAFYTLVREI 163          
BLAST of CK934050 vs. ExPASy Swiss-Prot
Match: GSP1_ASHGO (GTP-binding nuclear protein GSP1/Ran OS=Ashbya gossypii GN=GSP1 PE=3 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 3.703e-17
Identity = 49/155 (31.61%), Postives = 80/155 (51.61%), Query Frame = 2
Query:  125 FKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHITRWLEELRSHADKNIVIILIGNKSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFM 589
            FK+VL+GD   GK+  + R    EF     ATIGVE            +K  +WDTAGQE++  +   YY  A   ++++D++ R ++ ++  W  +L     +NI I+L GNK D++E++         F +K+ L + + SA    N E  F+
Sbjct:    8 FKLVLVGDGGTGKTTFVKRHLTGEFEKKYIATIGVEVHPLAFYTNFGEIKFDVWDTAGQEKFGGLRDGYYINAQCGIIMFDVTSRITYKNVPNWHRDL-VRVCENIPIVLCGNKVDVKERKV--KAKTITFHRKKNLQYYDISAKSNYNFEKPFL 159          
BLAST of CK934050 vs. ExPASy Swiss-Prot
Match: RASK_XENLA (GTPase KRas OS=Xenopus laevis GN=kras PE=2 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 4.836e-17
Identity = 54/162 (33.33%), Postives = 94/162 (58.02%), Query Frame = 2
Query:  125 FKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHITRWLEELRSHAD-KNIVIILIGNKSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEI 607
            +K+V++G   VGKS +  +  +N F  +   TI   ++ + +VI  ++    I DTAGQE Y A+   Y R   G + V+ I+  +SF+ I  + E+++   D +++ ++L+GNK  L   R V T+ A++ A+  G+ F+ETSA     V++AF T++ EI
Sbjct:    4 YKLVVVGAVGVGKSALTIQLIQNHFVDEYDPTIEDSYR-KQVVIDGETCLLDILDTAGQEEYSAMRDQYMRTGEGFLCVFAINNIKSFEDIHHYREQIKRVKDSEDVPMVLVGNKCAL-PSRTVDTKQAQDLARSYGIPFIETSAKTRQGVDDAFYTLVREI 163          
BLAST of CK934050 vs. ExPASy Swiss-Prot
Match: RASH_RRASV (Transforming protein p29 OS=Rasheed rat sarcoma virus GN=RAS PE=3 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 4.836e-17
Identity = 53/162 (32.72%), Postives = 93/162 (57.41%), Query Frame = 2
Query:  125 FKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHITRWLEELRSHADK-NIVIILIGNKSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEI 607
            +K+V++G   VGKS +  +  +N F  +   TI   ++ + +VI  ++    I DTAGQE Y A+   Y R   G + V+ I+  +SF+ I ++ E+++   D  ++ ++L+GNK DL     V +  A++ A+  G+ ++ETSA     VE+AF T++ EI
Sbjct:   63 YKLVVVGARGVGKSALTIQLIQNHFVDEYDPTIEDSYR-KQVVIDGETCLLDILDTAGQEEYSAMRDQYMRTGEGFLCVFAINNTKSFEDIHQYREQIKRVKDSDDVPMVLVGNKCDL-AAHTVESRQAQDLARSYGIPYIETSAKTRPGVEDAFYTLVREI 222          
BLAST of CK934050 vs. ExPASy Swiss-Prot
Match: RASH_MSVHA (Transforming protein p29 OS=Harvey murine sarcoma virus GN=H-RAS PE=1 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 4.836e-17
Identity = 53/162 (32.72%), Postives = 93/162 (57.41%), Query Frame = 2
Query:  125 FKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHITRWLEELRSHADK-NIVIILIGNKSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEI 607
            +K+V++G   VGKS +  +  +N F  +   TI   ++ + +VI  ++    I DT GQE Y A+   Y R   G + V+ I+  +SF+ I ++ E+++   D  ++ ++L+GNK DL   R V +  A++ A+  G+ ++ETSA     VE+AF T++ EI
Sbjct:   56 YKLVVVGARGVGKSALTIQLIQNHFVDEYDPTIEDSYR-KQVVIDGETCLLDILDTTGQEEYSAMRDQYMRTGEGFLCVFAINNTKSFEDIHQYREQIKRVKDSDDVPMVLVGNKCDL-AGRTVESRQAQDLARSYGIPYIETSAKTRQGVEDAFYTLVREI 215          
BLAST of CK934050 vs. ExPASy Swiss-Prot
Match: RAN_XENTR (GTP-binding nuclear protein Ran OS=Xenopus tropicalis GN=ran PE=2 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 4.836e-17
Identity = 49/166 (29.52%), Postives = 86/166 (51.81%), Query Frame = 2
Query:  125 FKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHITRWLEELRSHADKNIVIILIGNKSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVN 622
            FK+VL+GD   GK+  + R    EF     AT+GVE            +K  +WDTAGQE++  +   YY  A  A++++D++ R ++ ++  W  +L     +NI I+L GNK D+++++      +  F +K+ L + + SA    N E  F+ +  ++    N
Sbjct:   11 FKLVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGPIKFNVWDTAGQEKFGGLRDGYYIQAQCAIIMFDVTSRVTYKNVPNWHRDL-VRVCENIPIVLCGNKVDIKDRKV--KAKSIVFHRKKNLQYYDISAKSNYNFEKPFLWLARKLIGDPN 173          
The following BLAST results are available for this feature:
BLAST of CK934050 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
RAN_SALSA2.835e-1729.52GTP-binding nuclear protein Ran OS=Salmo salar GN=... [more]
RAN_DANRE2.835e-1729.52GTP-binding nuclear protein Ran OS=Danio rerio GN=... [more]
RAB7B_DICDI2.835e-1731.58Ras-related protein Rab-7B OS=Dictyostelium discoi... [more]
RSR1_CANAL3.703e-1732.52Ras-related protein RSR1 OS=Candida albicans GN=RS... [more]
RASH_MOUSE3.703e-1732.72GTPase HRas OS=Mus musculus GN=Hras1 PE=1 SV=1[more]
GSP1_ASHGO3.703e-1731.61GTP-binding nuclear protein GSP1/Ran OS=Ashbya gos... [more]
RASK_XENLA4.836e-1733.33GTPase KRas OS=Xenopus laevis GN=kras PE=2 SV=1[more]
RASH_RRASV4.836e-1732.72Transforming protein p29 OS=Rasheed rat sarcoma vi... [more]
RASH_MSVHA4.836e-1732.72Transforming protein p29 OS=Harvey murine sarcoma ... [more]
RAN_XENTR4.836e-1729.52GTP-binding nuclear protein Ran OS=Xenopus tropica... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004541_H10 Developing fruit peel at 38 DAFB Citrus sinensis cDNA clone P38DAB10001_IIIF_H10 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK934050 ID=CK934050; Name=CK934050; organism=Citrus sinensis; type=EST; length=847bp
GGGGGTTCAATATTGTGATTTGTGAAGTTGGTCGGTCTTGGTAAGCTCGA
TCTCTTACTAACTCTCAGTAGAAATGGCCAGCGGAGGAGGCTATGGAGAT
CCCAATCAGAAAATTGATTACGTATTCAAAGTTGTTTTAATCGGAGACTC
GGCCGTCGGCAAGTCTCAGATACTGGCAAGGTTTGCTCGAAACGAGTTCA
GTTTGGACTCTAAAGCCACCATTGGAGTTGAGTTTCAAACTAGGACTTTA
GTTATTCAACATAAGAGCGTCAAGGCACAGATCTGGGACACTGCTGGCCA
AGAACGATACAGGGCTGTCACAAGTGCATATTACAGAGGTGCTGTTGGGG
CAATGCTGGTTTACGACATTAGCAGACGCCAGAGCTTTGATCACATAACC
CGTTGGCTGGAAGAGTTGCGAAGCCATGCTGACAAGAATATTGTTATCAT
TCTCATTGGCAACAAAAGTGACCTTGAGGAGCAGCGGGCGGTTCCTACAG
AAGATGCCAAAGAATTTGCTCAGAAGGAAGGACTATTCTTCTTGGAGACC
TCAGCACTGGAAGCAACTAATGTGGAAAATGCTTTCATGACTGTGTTGAC
TGAGATTTTCAACATTGTAAACAAGAAGAATCTAACTGCTGGTGAAGGTC
AAGGCAATGGCAACCCTGCATCCCTTTCTGGCAAGAAGATTCTTGTTCCT
GGCCCAGCTCAAGAAATCCCTGCCAAGAGCAGCATGTGCTGTAGAACATG
ATGCAATTTGATATTACTCTCATATTGCACGAATCGGTTTTATGTAGTTA
ATAACATTTTTTTGAAAGGTGTTGTGCGTTTGGTGTGTATATTTTTC
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