CK934050

Overview
NameCK934050
Unique NameCK934050
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length847
Libraries
Library NameType
Developing fruit peel at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig9656 contig Csv1_Contig9656:213..1059. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CK934050 vs. ExPASy Swiss-Prot
Match: RAB2A_MACFA (Ras-related protein Rab-2A OS=Macaca fascicularis GN=RAB2A PE=2 SV=1)

HSP 1 Score: 187.193 bits (474), Expect = 9.991e-47
Identity = 88/169 (52.07%), Postives = 121/169 (71.60%), Query Frame = 2
Query:  119 YVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHITRWLEELRSHADKNIVIILIGNKSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNK 625
            Y+FK ++IGD+ VGKS +L +F    F      TIGVEF  R + I  K +K QIWDTAGQE +R++T +YYRGA GA+LVYDI+RR +F+H+T WLE+ R H++ N+VI+LIGNKSDLE +R V  E+ + FA++ GL F+ETSA  A+NVE AF+    EI+  + +
Sbjct:    5 YLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLTTWLEDARQHSNSNMVIMLIGNKSDLESRREVKKEEGEAFAREHGLIFMETSAKTASNVEEAFINTAKEIYEKIQE 173          
BLAST of CK934050 vs. ExPASy Swiss-Prot
Match: RAB2A_HUMAN (Ras-related protein Rab-2A OS=Homo sapiens GN=RAB2A PE=1 SV=1)

HSP 1 Score: 187.193 bits (474), Expect = 9.991e-47
Identity = 88/169 (52.07%), Postives = 121/169 (71.60%), Query Frame = 2
Query:  119 YVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHITRWLEELRSHADKNIVIILIGNKSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNK 625
            Y+FK ++IGD+ VGKS +L +F    F      TIGVEF  R + I  K +K QIWDTAGQE +R++T +YYRGA GA+LVYDI+RR +F+H+T WLE+ R H++ N+VI+LIGNKSDLE +R V  E+ + FA++ GL F+ETSA  A+NVE AF+    EI+  + +
Sbjct:    5 YLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLTTWLEDARQHSNSNMVIMLIGNKSDLESRREVKKEEGEAFAREHGLIFMETSAKTASNVEEAFINTAKEIYEKIQE 173          
BLAST of CK934050 vs. ExPASy Swiss-Prot
Match: RAB2A_DICDI (Ras-related protein Rab-2A OS=Dictyostelium discoideum GN=rab2A PE=2 SV=2)

HSP 1 Score: 187.193 bits (474), Expect = 9.991e-47
Identity = 87/169 (51.48%), Postives = 125/169 (73.96%), Query Frame = 2
Query:  119 YVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHITRWLEELRSHADKNIVIILIGNKSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNK 625
            ++FK ++IGD+ VGKS +L +F    F      TIGVEF  R + I +K++K QIWDTAGQE +R++T +YYRG+ GA+LVYDI+RR +F+H+T WL++ RS+A+ N+ IILIGNKSD+E +RAV  E+ ++FA + GL FLETSA  A+NVE AF+   ++I+  + K
Sbjct:    4 FLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKAIKLQIWDTAGQESFRSITRSYYRGSAGALLVYDITRRDTFNHLTCWLKDARSYANSNMTIILIGNKSDMESKRAVSYEEGRQFADENGLIFLETSAKTASNVEEAFVNTASKIYEKIQK 172          
BLAST of CK934050 vs. ExPASy Swiss-Prot
Match: RAB2A_CHICK (Ras-related protein Rab-2A OS=Gallus gallus GN=RAB2A PE=2 SV=1)

HSP 1 Score: 187.193 bits (474), Expect = 9.991e-47
Identity = 88/169 (52.07%), Postives = 121/169 (71.60%), Query Frame = 2
Query:  119 YVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHITRWLEELRSHADKNIVIILIGNKSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNK 625
            Y+FK ++IGD+ VGKS +L +F    F      TIGVEF  R + I  K +K QIWDTAGQE +R++T +YYRGA GA+LVYDI+RR +F+H+T WLE+ R H++ N+VI+LIGNKSDLE +R V  E+ + FA++ GL F+ETSA  A+NVE AF+    EI+  + +
Sbjct:    5 YLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLTTWLEDARQHSNSNMVIMLIGNKSDLESRREVKKEEGEAFAREHGLIFMETSAKTASNVEEAFINTAKEIYEKIQE 173          
BLAST of CK934050 vs. ExPASy Swiss-Prot
Match: RAB2A_CANFA (Ras-related protein Rab-2A OS=Canis familiaris GN=RAB2A PE=1 SV=1)

HSP 1 Score: 187.193 bits (474), Expect = 9.991e-47
Identity = 88/169 (52.07%), Postives = 121/169 (71.60%), Query Frame = 2
Query:  119 YVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHITRWLEELRSHADKNIVIILIGNKSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNK 625
            Y+FK ++IGD+ VGKS +L +F    F      TIGVEF  R + I  K +K QIWDTAGQE +R++T +YYRGA GA+LVYDI+RR +F+H+T WLE+ R H++ N+VI+LIGNKSDLE +R V  E+ + FA++ GL F+ETSA  A+NVE AF+    EI+  + +
Sbjct:    5 YLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLTTWLEDARQHSNSNMVIMLIGNKSDLESRREVKKEEGEAFAREHGLIFMETSAKTASNVEEAFINTAKEIYEKIQE 173          
BLAST of CK934050 vs. ExPASy Swiss-Prot
Match: RAB14_RAT (Ras-related protein Rab-14 OS=Rattus norvegicus GN=Rab14 PE=2 SV=3)

HSP 1 Score: 186.422 bits (472), Expect = 1.704e-46
Identity = 95/202 (47.03%), Postives = 134/202 (66.34%), Query Frame = 2
Query:  119 YVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHITRWLEELRSHADKNIVIILIGNKSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIV--NKKNLTAGEGQGNGNPASLSGKKIL-VPGPAQE 715
            Y+FK ++IGD  VGKS +L +F   +F  D   TIGVEF TR + +  + +K QIWDTAGQER+RAVT +YYRGA GA++VYDI+RR +++H++ WL + R+  + N VIILIGNK+DLE QR V  E+AK+FA++ GL FLE SA    NVE+AF+    +I+  +     +L A E      P++  G ++   P P +E
Sbjct:   10 YIFKYIIIGDMGVGKSCLLHQFTEKKFMADCPHTIGVEFGTRIIEVSGQKIKLQIWDTAGQERFRAVTRSYYRGAAGALMVYDITRRSTYNHLSSWLTDARNLTNPNTVIILIGNKADLEAQRDVTYEEAKQFAEENGLLFLEASAKTGENVEDAFLEAAKKIYQNIQDGSLDLNAAESGVQHKPSAPQGGRLTSEPQPQRE 211          
BLAST of CK934050 vs. ExPASy Swiss-Prot
Match: RAB14_PONAB (Ras-related protein Rab-14 OS=Pongo abelii GN=RAB14 PE=2 SV=3)

HSP 1 Score: 186.422 bits (472), Expect = 1.704e-46
Identity = 95/202 (47.03%), Postives = 134/202 (66.34%), Query Frame = 2
Query:  119 YVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHITRWLEELRSHADKNIVIILIGNKSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIV--NKKNLTAGEGQGNGNPASLSGKKIL-VPGPAQE 715
            Y+FK ++IGD  VGKS +L +F   +F  D   TIGVEF TR + +  + +K QIWDTAGQER+RAVT +YYRGA GA++VYDI+RR +++H++ WL + R+  + N VIILIGNK+DLE QR V  E+AK+FA++ GL FLE SA    NVE+AF+    +I+  +     +L A E      P++  G ++   P P +E
Sbjct:   10 YIFKYIIIGDMGVGKSCLLHQFTEKKFMADCPHTIGVEFGTRIIEVSGQKIKLQIWDTAGQERFRAVTRSYYRGAAGALMVYDITRRSTYNHLSSWLTDARNLTNPNTVIILIGNKADLEAQRDVTYEEAKQFAEENGLLFLEASAKTGENVEDAFLEAAKKIYQNIQDGSLDLNAAESGVQHKPSAPQGGRLTSEPQPQRE 211          
BLAST of CK934050 vs. ExPASy Swiss-Prot
Match: RAB14_PIG (Ras-related protein Rab-14 OS=Sus scrofa GN=RAB14 PE=2 SV=3)

HSP 1 Score: 186.422 bits (472), Expect = 1.704e-46
Identity = 95/202 (47.03%), Postives = 134/202 (66.34%), Query Frame = 2
Query:  119 YVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHITRWLEELRSHADKNIVIILIGNKSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIV--NKKNLTAGEGQGNGNPASLSGKKIL-VPGPAQE 715
            Y+FK ++IGD  VGKS +L +F   +F  D   TIGVEF TR + +  + +K QIWDTAGQER+RAVT +YYRGA GA++VYDI+RR +++H++ WL + R+  + N VIILIGNK+DLE QR V  E+AK+FA++ GL FLE SA    NVE+AF+    +I+  +     +L A E      P++  G ++   P P +E
Sbjct:   10 YIFKYIIIGDMGVGKSCLLHQFTEKKFMADCPHTIGVEFGTRIIEVSGQKIKLQIWDTAGQERFRAVTRSYYRGAAGALMVYDITRRSTYNHLSSWLTDARNLTNPNTVIILIGNKADLEAQRDVTYEEAKQFAEENGLLFLEASAKTGENVEDAFLEAAKKIYQNIQDGSLDLNAAESGVQHKPSAPQGGRLTSEPQPQRE 211          
BLAST of CK934050 vs. ExPASy Swiss-Prot
Match: RAB14_MOUSE (Ras-related protein Rab-14 OS=Mus musculus GN=Rab14 PE=1 SV=3)

HSP 1 Score: 186.422 bits (472), Expect = 1.704e-46
Identity = 95/202 (47.03%), Postives = 134/202 (66.34%), Query Frame = 2
Query:  119 YVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHITRWLEELRSHADKNIVIILIGNKSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIV--NKKNLTAGEGQGNGNPASLSGKKIL-VPGPAQE 715
            Y+FK ++IGD  VGKS +L +F   +F  D   TIGVEF TR + +  + +K QIWDTAGQER+RAVT +YYRGA GA++VYDI+RR +++H++ WL + R+  + N VIILIGNK+DLE QR V  E+AK+FA++ GL FLE SA    NVE+AF+    +I+  +     +L A E      P++  G ++   P P +E
Sbjct:   10 YIFKYIIIGDMGVGKSCLLHQFTEKKFMADCPHTIGVEFGTRIIEVSGQKIKLQIWDTAGQERFRAVTRSYYRGAAGALMVYDITRRSTYNHLSSWLTDARNLTNPNTVIILIGNKADLEAQRDVTYEEAKQFAEENGLLFLEASAKTGENVEDAFLEAAKKIYQNIQDGSLDLNAAESGVQHKPSAPQGGRLTSEPQPQRE 211          
BLAST of CK934050 vs. ExPASy Swiss-Prot
Match: RAB14_HUMAN (Ras-related protein Rab-14 OS=Homo sapiens GN=RAB14 PE=1 SV=4)

HSP 1 Score: 186.422 bits (472), Expect = 1.704e-46
Identity = 95/202 (47.03%), Postives = 134/202 (66.34%), Query Frame = 2
Query:  119 YVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHITRWLEELRSHADKNIVIILIGNKSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIV--NKKNLTAGEGQGNGNPASLSGKKIL-VPGPAQE 715
            Y+FK ++IGD  VGKS +L +F   +F  D   TIGVEF TR + +  + +K QIWDTAGQER+RAVT +YYRGA GA++VYDI+RR +++H++ WL + R+  + N VIILIGNK+DLE QR V  E+AK+FA++ GL FLE SA    NVE+AF+    +I+  +     +L A E      P++  G ++   P P +E
Sbjct:   10 YIFKYIIIGDMGVGKSCLLHQFTEKKFMADCPHTIGVEFGTRIIEVSGQKIKLQIWDTAGQERFRAVTRSYYRGAAGALMVYDITRRSTYNHLSSWLTDARNLTNPNTVIILIGNKADLEAQRDVTYEEAKQFAEENGLLFLEASAKTGENVEDAFLEAAKKIYQNIQDGSLDLNAAESGVQHKPSAPQGGRLTSEPQPQRE 211          
The following BLAST results are available for this feature:
BLAST of CK934050 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
RAB2A_MACFA9.991e-4752.07Ras-related protein Rab-2A OS=Macaca fascicularis ... [more]
RAB2A_HUMAN9.991e-4752.07Ras-related protein Rab-2A OS=Homo sapiens GN=RAB2... [more]
RAB2A_DICDI9.991e-4751.48Ras-related protein Rab-2A OS=Dictyostelium discoi... [more]
RAB2A_CHICK9.991e-4752.07Ras-related protein Rab-2A OS=Gallus gallus GN=RAB... [more]
RAB2A_CANFA9.991e-4752.07Ras-related protein Rab-2A OS=Canis familiaris GN=... [more]
RAB14_RAT1.704e-4647.03Ras-related protein Rab-14 OS=Rattus norvegicus GN... [more]
RAB14_PONAB1.704e-4647.03Ras-related protein Rab-14 OS=Pongo abelii GN=RAB1... [more]
RAB14_PIG1.704e-4647.03Ras-related protein Rab-14 OS=Sus scrofa GN=RAB14 ... [more]
RAB14_MOUSE1.704e-4647.03Ras-related protein Rab-14 OS=Mus musculus GN=Rab1... [more]
RAB14_HUMAN1.704e-4647.03Ras-related protein Rab-14 OS=Homo sapiens GN=RAB1... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004541_H10 Developing fruit peel at 38 DAFB Citrus sinensis cDNA clone P38DAB10001_IIIF_H10 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK934050 ID=CK934050; Name=CK934050; organism=Citrus sinensis; type=EST; length=847bp
GGGGGTTCAATATTGTGATTTGTGAAGTTGGTCGGTCTTGGTAAGCTCGA
TCTCTTACTAACTCTCAGTAGAAATGGCCAGCGGAGGAGGCTATGGAGAT
CCCAATCAGAAAATTGATTACGTATTCAAAGTTGTTTTAATCGGAGACTC
GGCCGTCGGCAAGTCTCAGATACTGGCAAGGTTTGCTCGAAACGAGTTCA
GTTTGGACTCTAAAGCCACCATTGGAGTTGAGTTTCAAACTAGGACTTTA
GTTATTCAACATAAGAGCGTCAAGGCACAGATCTGGGACACTGCTGGCCA
AGAACGATACAGGGCTGTCACAAGTGCATATTACAGAGGTGCTGTTGGGG
CAATGCTGGTTTACGACATTAGCAGACGCCAGAGCTTTGATCACATAACC
CGTTGGCTGGAAGAGTTGCGAAGCCATGCTGACAAGAATATTGTTATCAT
TCTCATTGGCAACAAAAGTGACCTTGAGGAGCAGCGGGCGGTTCCTACAG
AAGATGCCAAAGAATTTGCTCAGAAGGAAGGACTATTCTTCTTGGAGACC
TCAGCACTGGAAGCAACTAATGTGGAAAATGCTTTCATGACTGTGTTGAC
TGAGATTTTCAACATTGTAAACAAGAAGAATCTAACTGCTGGTGAAGGTC
AAGGCAATGGCAACCCTGCATCCCTTTCTGGCAAGAAGATTCTTGTTCCT
GGCCCAGCTCAAGAAATCCCTGCCAAGAGCAGCATGTGCTGTAGAACATG
ATGCAATTTGATATTACTCTCATATTGCACGAATCGGTTTTATGTAGTTA
ATAACATTTTTTTGAAAGGTGTTGTGCGTTTGGTGTGTATATTTTTC
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