CK934050
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK934050 vs. ExPASy Swiss-Prot
Match: RAB1B_RAT (Ras-related protein Rab-1B OS=Rattus norvegicus GN=Rab1b PE=1 SV=1) HSP 1 Score: 183.341 bits (464), Expect = 1.443e-45 Identity = 92/188 (48.94%), Postives = 131/188 (69.68%), Query Frame = 2 Query: 104 NQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHITRWLEELRSHADKNIVIILIGNKSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLTAGEGQGNGNP 667 N + DY+FK++LIGDS VGKS +L RFA + ++ +TIGV+F+ RT+ + K++K QIWDTAGQER+R VTS+YYRGA G ++VYD++ ++S+ ++ +WL+E+ +A +N+ +L+GNKSDL ++ V AKEFA G+ FLETSA ATNVE AFMT+ EI KK + G G P Sbjct: 2 NPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQERFRTVTSSYYRGAHGIIVVYDVTDQESYANVKQWLQEIDRYASENVNKLLVGNKSDLTTKKVVDNTTAKEFADSLGVPFLETSAKNATNVEQAFMTMAAEI-----KKRMGPGAASGGERP 184
BLAST of CK934050 vs. ExPASy Swiss-Prot
Match: RAB1B_PONAB (Ras-related protein Rab-1B OS=Pongo abelii GN=RAB1B PE=2 SV=1) HSP 1 Score: 183.341 bits (464), Expect = 1.443e-45 Identity = 91/188 (48.40%), Postives = 131/188 (69.68%), Query Frame = 2 Query: 104 NQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHITRWLEELRSHADKNIVIILIGNKSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLTAGEGQGNGNP 667 N + DY+FK++LIGDS VGKS +L RFA + ++ +TIGV+F+ RT+ + K++K QIWDTAGQER+R +TS+YYRGA G ++VYD++ ++S+ ++ +WL+E+ +A +N+ +L+GNKSDL ++ V AKEFA G+ FLETSA ATNVE AFMT+ EI KK + G G P Sbjct: 2 NPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESYANVKQWLQEIDRYASENVNKLLVGNKSDLTTKKVVDNTTAKEFADSLGIPFLETSAKNATNVEQAFMTMAAEI-----KKRMGPGAASGGERP 184
BLAST of CK934050 vs. ExPASy Swiss-Prot
Match: RAB1B_HUMAN (Ras-related protein Rab-1B OS=Homo sapiens GN=RAB1B PE=1 SV=1) HSP 1 Score: 183.341 bits (464), Expect = 1.443e-45 Identity = 91/188 (48.40%), Postives = 131/188 (69.68%), Query Frame = 2 Query: 104 NQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHITRWLEELRSHADKNIVIILIGNKSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLTAGEGQGNGNP 667 N + DY+FK++LIGDS VGKS +L RFA + ++ +TIGV+F+ RT+ + K++K QIWDTAGQER+R +TS+YYRGA G ++VYD++ ++S+ ++ +WL+E+ +A +N+ +L+GNKSDL ++ V AKEFA G+ FLETSA ATNVE AFMT+ EI KK + G G P Sbjct: 2 NPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESYANVKQWLQEIDRYASENVNKLLVGNKSDLTTKKVVDNTTAKEFADSLGIPFLETSAKNATNVEQAFMTMAAEI-----KKRMGPGAASGGERP 184
BLAST of CK934050 vs. ExPASy Swiss-Prot
Match: RAB1B_BOVIN (Ras-related protein Rab-1B OS=Bos taurus GN=RAB1B PE=2 SV=1) HSP 1 Score: 183.341 bits (464), Expect = 1.443e-45 Identity = 91/188 (48.40%), Postives = 131/188 (69.68%), Query Frame = 2 Query: 104 NQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHITRWLEELRSHADKNIVIILIGNKSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLTAGEGQGNGNP 667 N + DY+FK++LIGDS VGKS +L RFA + ++ +TIGV+F+ RT+ + K++K QIWDTAGQER+R +TS+YYRGA G ++VYD++ ++S+ ++ +WL+E+ +A +N+ +L+GNKSDL ++ V AKEFA G+ FLETSA ATNVE AFMT+ EI KK + G G P Sbjct: 2 NPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESYANVKQWLQEIDRYASENVNKLLVGNKSDLTTKKVVDNTTAKEFADSLGIPFLETSAKNATNVEQAFMTMAAEI-----KKRMGPGAASGGERP 184
BLAST of CK934050 vs. ExPASy Swiss-Prot
Match: RAB1B_MOUSE (Ras-related protein Rab-1B OS=Mus musculus GN=Rab1b PE=1 SV=1) HSP 1 Score: 182.956 bits (463), Expect = 1.884e-45 Identity = 91/188 (48.40%), Postives = 131/188 (69.68%), Query Frame = 2 Query: 104 NQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHITRWLEELRSHADKNIVIILIGNKSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLTAGEGQGNGNP 667 N + DY+FK++LIGDS VGKS +L RFA + ++ +TIGV+F+ RT+ + K++K QIWDTAGQER+R +TS+YYRGA G ++VYD++ ++S+ ++ +WL+E+ +A +N+ +L+GNKSDL ++ V AKEFA G+ FLETSA ATNVE AFMT+ EI KK + G G P Sbjct: 2 NPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESYANVKQWLQEIDRYASENVNKLLVGNKSDLTTKKVVDNTTAKEFADSLGVPFLETSAKNATNVEQAFMTMAAEI-----KKRMGPGAASGGERP 184
BLAST of CK934050 vs. ExPASy Swiss-Prot
Match: YPTM1_MAIZE (GTP-binding protein YPTM1 OS=Zea mays GN=YPTM1 PE=2 SV=2) HSP 1 Score: 181.415 bits (459), Expect = 5.482e-45 Identity = 96/215 (44.65%), Postives = 143/215 (66.51%), Query Frame = 2 Query: 104 NQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHITRWLEELRSHADKNIVIILIGNKSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLTAGEGQGNGNPASLSGKKILVPGPAQEIPAKSSMCCRT 748 + + DY+FK++LIGDS+VGKS L RFA + + +TIGV+F+ RT+ ++ K+VK QIWDTAGQER+R +TS+YYRGA G ++VYDI+ +SF+++ +WL+E+ +A+ ++ +L+GNK DL E RAV T A+ +AQ+ G+ FLETSA E+ NVE AF+ + I KK+ + P+++ K P Q+ KSS CC T Sbjct: 2 SNEFDYLFKLLLIGDSSVGKSCFLLRFADDSYVDSYISTIGVDFKIRTVEVEGKTVKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDITDMESFNNVKQWLDEIDRYANDSVRKLLVGNKCDLAENRAVDTSVAQAYAQEVGIPFLETSAKESINVEEAFLAMSAAI-----KKSKAGSQAALERKPSNVVQMK---GRPIQQEQQKSSRCCST 208
BLAST of CK934050 vs. ExPASy Swiss-Prot
Match: RAB1A_DICDI (Ras-related protein Rab-1A OS=Dictyostelium discoideum GN=rab1A PE=2 SV=2) HSP 1 Score: 181.415 bits (459), Expect = 5.482e-45 Identity = 97/212 (45.75%), Postives = 138/212 (65.09%), Query Frame = 2 Query: 104 NQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHITRWLEELRSHADKNIVIILIGNKSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLTAGEGQGNGNPASLSGKKILVPGPAQEIPAKSSMC 739 N Y+FK++LIGDS VGKS +L RFA + +S +TIGV+F+ RT+ + K++K QIWDTAGQER+R +TS+YYRGA G ++VYD++ + +F+++ +WL+E+ A +N+ +L+GNKSDL ++ V AK FA + FLETSA ++TNVE AFMT+ TEI K LTA + P K +VPG + I KS C Sbjct: 2 NPDYHYLFKLLLIGDSGVGKSCLLLRFADDTYSESFISTIGVDFKIRTIELNGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDKLTFENVRQWLQEIDRFACENVNKLLVGNKSDLVAKKVVDFNTAKAFADSLQIPFLETSAKQSTNVEQAFMTMATEI-----KNRLTASQ------PTQTVDKNKVVPGSSAPISPKSGCC 202
BLAST of CK934050 vs. ExPASy Swiss-Prot
Match: YPTV1_VOLCA (GTP-binding protein yptV1 OS=Volvox carteri GN=YPTV1 PE=3 SV=1) HSP 1 Score: 181.03 bits (458), Expect = 7.160e-45 Identity = 97/213 (45.54%), Postives = 140/213 (65.73%), Query Frame = 2 Query: 104 NQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHITRWLEELRSHADKNIVIILIGNKSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLTAGEGQGNGNPASLSGKKILVPGPAQEIPAKSSMCC 742 N + DY+FK++LIGDS VGKS +L RFA + ++ +TIGV+F+ RT+ + K +K QIWDTAGQER+R +TS+YYRGA G ++VYD++ ++SF+++ +WL E+ +A +N+ +L+GNKSDL ++ V + AK FA + G+ FLETSA ATNVE AFMT+ EI KN A + G ++ P + I KSS CC Sbjct: 2 NPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTVELDGKVIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLAEIDRYASENVNKLLVGNKSDLTGKKVVDYQAAKAFADEIGIPFLETSAKNATNVEQAFMTMAAEI------KNRMASQ-----PVPPKPGGPVVRPTEGKPINNKSSSCC 203
BLAST of CK934050 vs. ExPASy Swiss-Prot
Match: RAB1B_PIG (Ras-related protein Rab-1B OS=Sus scrofa GN=RAB1B PE=2 SV=1) HSP 1 Score: 181.03 bits (458), Expect = 7.160e-45 Identity = 91/188 (48.40%), Postives = 130/188 (69.15%), Query Frame = 2 Query: 104 NQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHITRWLEELRSHADKNIVIILIGNKSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLTAGEGQGNGNP 667 N + DY+FK++LIGDS VGKS +L RFA + ++ +TIGV+F+ RT+ + K++K QIWDTAGQER R +TS+YYRGA G ++VYD++ ++S+ ++ +WL+E+ +A +N+ +L+GNKSDL ++ V AKEFA G+ FLETSA ATNVE AFMT+ EI KK + G G P Sbjct: 2 NPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQERGRTITSSYYRGAHGIIVVYDVTDQESYANVKQWLQEIDRYASENVNKLLVGNKSDLTTKKVVDNTTAKEFADSLGIPFLETSAKNATNVEQAFMTMAAEI-----KKRMGPGAASGGERP 184
BLAST of CK934050 vs. ExPASy Swiss-Prot
Match: RAB1A_LYMST (Ras-related protein Rab-1A OS=Lymnaea stagnalis GN=RAB1A PE=2 SV=1) HSP 1 Score: 181.03 bits (458), Expect = 7.160e-45 Identity = 87/170 (51.18%), Postives = 127/170 (74.71%), Query Frame = 2 Query: 104 NQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHITRWLEELRSHADKNIVIILIGNKSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFN 613 N DY+FK++LIGDS VGKS +L RFA + ++ +TIGV+F+ RT+ + K++K QIWDTAGQER+R +TS+YYRGA G ++VYD++ ++SF+++ +WL+E+ +A +N+ +L+GNKSDL ++ V AKE+A + G+ FLETSA ATNVE AFMT+ EI N Sbjct: 5 NPDYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKLLVGNKSDLTTKKVVDFTTAKEYADQLGIPFLETSAKNATNVEQAFMTMAAEIKN 174 The following BLAST results are available for this feature:
BLAST of CK934050 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CK934050 ID=CK934050; Name=CK934050; organism=Citrus sinensis; type=EST; length=847bpback to top |