CK934050
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CK934050 vs. ExPASy Swiss-Prot
Match: YPT1_SCHPO (GTP-binding protein ypt1 OS=Schizosaccharomyces pombe GN=ypt1 PE=1 SV=2) HSP 1 Score: 180.644 bits (457), Expect = 9.351e-45 Identity = 93/213 (43.66%), Postives = 139/213 (65.26%), Query Frame = 2 Query: 104 NQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHITRWLEELRSHADKNIVIILIGNKSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLTAGEGQGNGNPASLSGKKILVPGPAQEIPAKSSMCC 742 N + DY+FK++LIGDS VGKS +L RFA + ++ +TIGV+F+ RT ++ K+VK QIWDTAGQER+R +TS+YYRGA G ++VYD++ + SF+++ +WL+E+ +A + + +L+GNKSD+ +++ V AKEFA + FLETSA ++TNVE AF+T+ +I E GN AS + K + G + SS CC Sbjct: 2 NPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTFELEGKTVKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQDSFNNVKQWLQEIDRYAVEGVNRLLVGNKSDMVDKKVVEYSVAKEFADSLNIPFLETSAKDSTNVEQAFLTMSRQI-----------KERMGNNTFASSNAKSSVKVGQGTNVSQSSSNCC 203
BLAST of CK934050 vs. ExPASy Swiss-Prot
Match: RBD2A_ARATH (Ras-related protein RABD2A OS=Arabidopsis thaliana GN=RABD2A PE=1 SV=3) HSP 1 Score: 180.259 bits (456), Expect = 1.221e-44 Identity = 94/215 (43.72%), Postives = 139/215 (64.65%), Query Frame = 2 Query: 104 NQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHITRWLEELRSHADKNIVIILIGNKSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLTAGEGQGNGNPASLSGKKILVPGPAQEIPAKSSMCCRT 748 N + DY+FK++LIGDS VGKS +L RF+ + + +TIGV+F+ RT+ K++K QIWDTAGQER+R +TS+YYRGA G ++VYD++ +SF+++ +WL E+ +A N+ +L+GNKSDL E RA+P E AK FA + G+ F+ETSA +ATNVE AFM + I K+ + + N P ++ + Q + K+ CC T Sbjct: 2 NPEYDYLFKLLLIGDSGVGKSCLLLRFSDDSYVESYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDEESFNNVKQWLSEIDRYASDNVNKLLVGNKSDLTENRAIPYETAKAFADEIGIPFMETSAKDATNVEQAFMAMSASI-----KERMASQPAGNNARPPTVQIR-------GQPVAQKNG-CCST 203
BLAST of CK934050 vs. ExPASy Swiss-Prot
Match: RAB1A_RAT (Ras-related protein Rab-1A OS=Rattus norvegicus GN=Rab1A PE=1 SV=3) HSP 1 Score: 180.259 bits (456), Expect = 1.221e-44 Identity = 99/215 (46.05%), Postives = 140/215 (65.12%), Query Frame = 2 Query: 104 NQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHITRWLEELRSHADKNIVIILIGNKSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLTAGEGQGNGNPASLSGKKILVPGPAQEIPAKSS--MCC 742 N + DY+FK++LIGDS VGKS +L RFA + ++ +TIGV+F+ RT+ + K++K QIWDTAGQER+R +TS+YYRGA G ++VYD++ ++SF+++ +WL+E+ +A +N+ +L+GNK DL ++ V AKEFA G+ FLETSA ATNVE +FMT+ EI KK + G G A S KI Q P K S CC Sbjct: 5 NPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKLLVGNKCDLTTKKVVDYTTAKEFADSLGIPFLETSAKNATNVEQSFMTMAAEI-----KKRMGPGATAGG---AEKSNVKI------QSTPVKQSGGGCC 205
BLAST of CK934050 vs. ExPASy Swiss-Prot
Match: RAB1A_MOUSE (Ras-related protein Rab-1A OS=Mus musculus GN=Rab1A PE=1 SV=3) HSP 1 Score: 180.259 bits (456), Expect = 1.221e-44 Identity = 99/215 (46.05%), Postives = 140/215 (65.12%), Query Frame = 2 Query: 104 NQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHITRWLEELRSHADKNIVIILIGNKSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLTAGEGQGNGNPASLSGKKILVPGPAQEIPAKSS--MCC 742 N + DY+FK++LIGDS VGKS +L RFA + ++ +TIGV+F+ RT+ + K++K QIWDTAGQER+R +TS+YYRGA G ++VYD++ ++SF+++ +WL+E+ +A +N+ +L+GNK DL ++ V AKEFA G+ FLETSA ATNVE +FMT+ EI KK + G G A S KI Q P K S CC Sbjct: 5 NPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKLLVGNKCDLTTKKVVDYTTAKEFADSLGIPFLETSAKNATNVEQSFMTMAAEI-----KKRMGPGATAGG---AEKSNVKI------QSTPVKQSGGGCC 205
BLAST of CK934050 vs. ExPASy Swiss-Prot
Match: RAB1A_HUMAN (Ras-related protein Rab-1A OS=Homo sapiens GN=RAB1A PE=1 SV=3) HSP 1 Score: 180.259 bits (456), Expect = 1.221e-44 Identity = 99/215 (46.05%), Postives = 140/215 (65.12%), Query Frame = 2 Query: 104 NQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHITRWLEELRSHADKNIVIILIGNKSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLTAGEGQGNGNPASLSGKKILVPGPAQEIPAKSS--MCC 742 N + DY+FK++LIGDS VGKS +L RFA + ++ +TIGV+F+ RT+ + K++K QIWDTAGQER+R +TS+YYRGA G ++VYD++ ++SF+++ +WL+E+ +A +N+ +L+GNK DL ++ V AKEFA G+ FLETSA ATNVE +FMT+ EI KK + G G A S KI Q P K S CC Sbjct: 5 NPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKLLVGNKCDLTTKKVVDYTTAKEFADSLGIPFLETSAKNATNVEQSFMTMAAEI-----KKRMGPGATAGG---AEKSNVKI------QSTPVKQSGGGCC 205
BLAST of CK934050 vs. ExPASy Swiss-Prot
Match: RAB1A_CANFA (Ras-related protein Rab-1A OS=Canis familiaris GN=RAB1A PE=1 SV=3) HSP 1 Score: 180.259 bits (456), Expect = 1.221e-44 Identity = 99/215 (46.05%), Postives = 140/215 (65.12%), Query Frame = 2 Query: 104 NQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHITRWLEELRSHADKNIVIILIGNKSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLTAGEGQGNGNPASLSGKKILVPGPAQEIPAKSS--MCC 742 N + DY+FK++LIGDS VGKS +L RFA + ++ +TIGV+F+ RT+ + K++K QIWDTAGQER+R +TS+YYRGA G ++VYD++ ++SF+++ +WL+E+ +A +N+ +L+GNK DL ++ V AKEFA G+ FLETSA ATNVE +FMT+ EI KK + G G A S KI Q P K S CC Sbjct: 5 NPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKLLVGNKCDLTTKKVVDYTTAKEFADSLGIPFLETSAKNATNVEQSFMTMAAEI-----KKRMGPGATAGG---AEKSNVKI------QSTPVKQSGGGCC 205
BLAST of CK934050 vs. ExPASy Swiss-Prot
Match: YPT1_YEAST (GTP-binding protein YPT1 OS=Saccharomyces cerevisiae GN=YPT1 PE=1 SV=2) HSP 1 Score: 179.874 bits (455), Expect = 1.595e-44 Identity = 89/202 (44.06%), Postives = 145/202 (71.78%), Query Frame = 2 Query: 104 NQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHITRWLEELRSHADKNIVIILIGNKSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNL--TAGEGQGNGNPASLSGKKILVPG 703 N + DY+FK++LIG+S VGKS +L RF+ + ++ D +TIGV+F+ +T+ + K+VK QIWDTAGQER+R +TS+YYRG+ G ++VYD++ ++SF+ + WL+E+ +A ++ +L+GNK DL+++R V + AKEFA + FLETSAL++TNVE+AF+T+ +I ++++NL T + + GN +L G+ + G Sbjct: 2 NSEYDYLFKLLLIGNSGVGKSCLLLRFSDDTYTNDYISTIGVDFKIKTVELDGKTVKLQIWDTAGQERFRTITSSYYRGSHGIIIVYDVTDQESFNGVKMWLQEIDRYATSTVLKLLVGNKCDLKDKRVVEYDVAKEFADANKMPFLETSALDSTNVEDAFLTMARQIKESMSQQNLNETTQKKEDKGN-VNLKGQSLTNTG 202
BLAST of CK934050 vs. ExPASy Swiss-Prot
Match: RIC1_ORYSJ (Ras-related protein RIC1 OS=Oryza sativa subsp. japonica GN=RIC1 PE=2 SV=2) HSP 1 Score: 179.489 bits (454), Expect = 2.083e-44 Identity = 97/212 (45.75%), Postives = 138/212 (65.09%), Query Frame = 2 Query: 104 NQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHITRWLEELRSHADKNIVIILIGNKSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLTAGEGQGNGNPASLSGKKILVPGPAQEIPAKSSMC 739 N + DY+FK++LIGDS VGKS +L RFA + + +TIGV+F+ RT+ K++K QIWDTAGQER+R +TS+YYRGA G ++VYD++ ++SF+++ +WL E+ +A +N+ +L+GNK DL E R V E K A + G+ FLETSA +ATNVE AFMT+ EI KN A + PA+ + K V Q + +SS C Sbjct: 2 NPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDLAENRVVSYEAGKALADEIGIPFLETSAKDATNVEKAFMTMAGEI------KNRMASQ------PATNASKPATVQMRGQPVAQQSSCC 201
BLAST of CK934050 vs. ExPASy Swiss-Prot
Match: RAB1A_PIG (Ras-related protein Rab-1A OS=Sus scrofa GN=RAB1A PE=2 SV=3) HSP 1 Score: 178.718 bits (452), Expect = 3.553e-44 Identity = 99/215 (46.05%), Postives = 139/215 (64.65%), Query Frame = 2 Query: 104 NQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHITRWLEELRSHADKNIVIILIGNKSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLTAGEGQGNGNPASLSGKKILVPGPAQEIPAKSS--MCC 742 N + DY+FK++LIGDS VGKS +L RFA + ++ +TIGV+F+ RT+ + K++K QIWDTAGQER+R +TS+YYRGA G ++VYD++ + SF+++ +WL+E+ +A +N+ +L+GNK DL ++ V AKEFA G+ FLETSA ATNVE +FMT+ EI KK + G G A S KI Q P K S CC Sbjct: 5 NPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQGSFNNVKQWLQEIDRYASENVNKLLVGNKCDLTTKKVVDYTTAKEFADSLGIPFLETSAKNATNVEQSFMTMAAEI-----KKRMGPGATAGG---AEKSNVKI------QSTPVKQSGGGCC 205
BLAST of CK934050 vs. ExPASy Swiss-Prot
Match: RAB8B_RAT (Ras-related protein Rab-8B OS=Rattus norvegicus GN=Rab8b PE=1 SV=1) HSP 1 Score: 178.333 bits (451), Expect = 4.641e-44 Identity = 84/188 (44.68%), Postives = 127/188 (67.55%), Query Frame = 2 Query: 116 DYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHITRWLEELRSHADKNIVIILIGNKSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLTAGEGQGNGNPASLS 679 DY+FK++LIGDS VGK+ +L RF+ + F+ +TIG++F+ RT+ + K +K QIWDTAGQER+R +T+AYYRGA+G MLVYDI+ +SFD+I W+ + HA ++ +++GNK D+ ++R V E ++ A G+ FLETSA +TNVE AF T+ +I +N+K + G G P ++ Sbjct: 6 DYLFKLLLIGDSGVGKTCLLFRFSEDAFNTTFISTIGIDFKIRTIELDGKKIKLQIWDTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKNWIRNIEEHASSDVERMILGNKCDMNDKRQVSKERGEKLAIDYGIKFLETSAKSSTNVEEAFFTLARDIMTKLNRK-MNDSNSSGAGGPVKIT 192 The following BLAST results are available for this feature:
BLAST of CK934050 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CK934050 ID=CK934050; Name=CK934050; organism=Citrus sinensis; type=EST; length=847bpback to top |